Fusion Gene Studies
in Kim Lab

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Combined fusion break point information from three fusion resources

:Data-Source-Ctype-Sample-Hgene-Hchr-Hbp-Hstrand-Tgene-Tchr-Tbp-Tstrand

ORF analyzed Fusions with fgID of FusionGDB

:Hgene-HgID-Tgene-TgID-FusionGene-FGID

ORF analyzed Fusion genes with break information

:ORF-Henst-Tenst-DB-source-Ctype-Sample-Hgene-Hchr-Hbp-Hstrand-Tgene-Tchr-Tbp-Tstrand

Protein feature (domain) retention analysis results for Hgene

:ORF-Hgene-Hbp-Tgene-Tbp-HuniprotAcc-Hstrand-HbpExonNum-HexonNum-HproteinFeatureLociInAA-HbpLociInAA-HlenAA

Protein feature (domain) retention analysis results for Tgene

:ORF-Hgene-Hbp-Tgene-Tbp-TuniprotAcc-Tstrand-TbpExonNum-TexonNum-TproteinFeatureLociInAA-TbpLociInAA-TlenAA

Interacting proteins with each partner of fusion gene

:Hgene-Hinteractor-Tgene-Tinteractor

Drug information targeting proteins involved in fusion genes

:DrugStatus-DrugBankID-DrugName-DrugType-UniProtAcc-Action

Disease information related with the genes involved in fusion genes

:..-GeneSymbol-DisNetID-DiseaseName-..

UniProtAcc of genes involved in fusion genes

UniProtAcc-GeneSymbol

Fusion protein sequence

:ORF-Henst-Tenst-empty-DataType-Source-Ctype-Sample-Hgen-Hchr-Hbp-Hstrand-Tgene-Tchr-Tbp-Tstrand-SeqLen-Seq

Fusion transcript sequences (CDS only)

:ORF-Henst-Tenst-empty-DataType-Source-Ctype-Sample-Hgen-Hchr-Hbp-Hstrand-Tgene-Tchr-Tbp-Tstrand-SeqLen-Seq

Fusion transcript sequences (full transcript)

:ORF-Henst-Tenst-empty-DataType-Source-Ctype-Sample-Hgen-Hchr-Hbp-Hstrand-Tgene-Tchr-Tbp-Tstrand-BreakPoint-Seq

# of samples of in-frame fusion genes

:Hgene-Tgene-NumSamples