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Gene: SNHG7 |
Gene summary for SNHG7 |
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Gene information | Species | Human | Gene symbol | SNHG7 | Gene ID | 84973 |
Gene name | small nucleolar RNA host gene 7 | |
Gene Alias | NCRNA00061 | |
Cytomap | 9q34.3 | |
Gene Type | ncRNA | GO ID | GO:0006139 | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
84973 | SNHG7 | GSM4909282 | Human | Breast | IDC | 2.76e-20 | -5.22e-01 | -0.0288 |
84973 | SNHG7 | GSM4909286 | Human | Breast | IDC | 1.71e-11 | 3.41e-01 | 0.1081 |
84973 | SNHG7 | GSM4909287 | Human | Breast | IDC | 1.17e-12 | -4.79e-01 | 0.2057 |
84973 | SNHG7 | GSM4909288 | Human | Breast | IDC | 3.05e-04 | -1.79e-01 | 0.0988 |
84973 | SNHG7 | GSM4909290 | Human | Breast | IDC | 3.20e-07 | -4.62e-01 | 0.2096 |
84973 | SNHG7 | GSM4909292 | Human | Breast | IDC | 5.78e-05 | 4.83e-01 | 0.1236 |
84973 | SNHG7 | GSM4909294 | Human | Breast | IDC | 4.51e-09 | -4.54e-01 | 0.2022 |
84973 | SNHG7 | GSM4909296 | Human | Breast | IDC | 3.97e-14 | -4.98e-01 | 0.1524 |
84973 | SNHG7 | GSM4909297 | Human | Breast | IDC | 2.15e-15 | -1.33e-01 | 0.1517 |
84973 | SNHG7 | GSM4909301 | Human | Breast | IDC | 1.75e-04 | -3.87e-01 | 0.1577 |
84973 | SNHG7 | GSM4909304 | Human | Breast | IDC | 3.94e-03 | -3.57e-01 | 0.1636 |
84973 | SNHG7 | GSM4909306 | Human | Breast | IDC | 3.94e-11 | -4.82e-01 | 0.1564 |
84973 | SNHG7 | GSM4909308 | Human | Breast | IDC | 2.41e-07 | -3.94e-01 | 0.158 |
84973 | SNHG7 | GSM4909311 | Human | Breast | IDC | 4.41e-37 | -5.25e-01 | 0.1534 |
84973 | SNHG7 | GSM4909312 | Human | Breast | IDC | 3.44e-18 | -3.74e-01 | 0.1552 |
84973 | SNHG7 | GSM4909319 | Human | Breast | IDC | 7.58e-42 | -6.08e-01 | 0.1563 |
84973 | SNHG7 | GSM4909320 | Human | Breast | IDC | 7.32e-08 | -4.78e-01 | 0.1575 |
84973 | SNHG7 | GSM4909321 | Human | Breast | IDC | 3.36e-15 | -1.91e-01 | 0.1559 |
84973 | SNHG7 | brca2 | Human | Breast | Precancer | 1.72e-06 | -4.00e-01 | -0.024 |
84973 | SNHG7 | M2 | Human | Breast | IDC | 8.76e-04 | -5.39e-01 | 0.21 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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