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Gene: SATB2-AS1 |
Gene summary for SATB2-AS1 |
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Gene information | Species | Human | Gene symbol | SATB2-AS1 | Gene ID | 150538 |
Gene name | SATB2 antisense RNA 1 | |
Gene Alias | SATB2-AS1 | |
Cytomap | 2q33.1 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
150538 | SATB2-AS1 | HTA11_3410_2000001011 | Human | Colorectum | AD | 1.97e-13 | -5.03e-01 | 0.0155 |
150538 | SATB2-AS1 | HTA11_2487_2000001011 | Human | Colorectum | SER | 3.14e-02 | -3.95e-01 | -0.1808 |
150538 | SATB2-AS1 | HTA11_78_2000001011 | Human | Colorectum | AD | 4.10e-04 | -4.16e-01 | -0.1088 |
150538 | SATB2-AS1 | HTA11_3361_2000001011 | Human | Colorectum | AD | 1.95e-04 | -4.62e-01 | -0.1207 |
150538 | SATB2-AS1 | HTA11_1391_2000001011 | Human | Colorectum | AD | 4.95e-09 | -4.80e-01 | -0.059 |
150538 | SATB2-AS1 | HTA11_866_3004761011 | Human | Colorectum | AD | 2.55e-06 | -4.07e-01 | 0.096 |
150538 | SATB2-AS1 | HTA11_10711_2000001011 | Human | Colorectum | AD | 2.92e-03 | -4.01e-01 | 0.0338 |
150538 | SATB2-AS1 | HTA11_7696_3000711011 | Human | Colorectum | AD | 1.08e-11 | -4.93e-01 | 0.0674 |
150538 | SATB2-AS1 | HTA11_6818_2000001021 | Human | Colorectum | AD | 4.33e-03 | -4.52e-01 | 0.0588 |
150538 | SATB2-AS1 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 6.65e-07 | -5.34e-01 | 0.281 |
150538 | SATB2-AS1 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 1.59e-04 | -3.92e-01 | 0.3859 |
150538 | SATB2-AS1 | HTA11_99999973899_84307 | Human | Colorectum | MSS | 1.33e-06 | -5.68e-01 | 0.2585 |
150538 | SATB2-AS1 | HTA11_99999974143_84620 | Human | Colorectum | MSS | 2.51e-22 | -5.75e-01 | 0.3005 |
150538 | SATB2-AS1 | F007 | Human | Colorectum | FAP | 1.46e-06 | -4.33e-01 | 0.1176 |
150538 | SATB2-AS1 | A002-C-010 | Human | Colorectum | FAP | 7.62e-03 | -3.10e-01 | 0.242 |
150538 | SATB2-AS1 | A001-C-207 | Human | Colorectum | FAP | 4.23e-09 | -4.05e-01 | 0.1278 |
150538 | SATB2-AS1 | A015-C-203 | Human | Colorectum | FAP | 5.95e-16 | 2.79e-02 | -0.1294 |
150538 | SATB2-AS1 | A015-C-204 | Human | Colorectum | FAP | 3.03e-02 | -1.37e-01 | -0.0228 |
150538 | SATB2-AS1 | A002-C-201 | Human | Colorectum | FAP | 1.65e-13 | -3.76e-01 | 0.0324 |
150538 | SATB2-AS1 | A002-C-203 | Human | Colorectum | FAP | 3.08e-13 | -4.83e-01 | 0.2786 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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