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Gene: RPL13AP5 |
Gene summary for RPL13AP5 |
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Gene information | Species | Human | Gene symbol | RPL13AP5 | Gene ID | 728658 |
Gene name | ribosomal protein L13a pseudogene 5 | |
Gene Alias | RPL13A_8_1086 | |
Cytomap | 10q24.1 | |
Gene Type | pseudo | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
728658 | RPL13AP5 | Adj_PTCwithHT_6 | Human | Thyroid | HT | 1.25e-04 | 4.31e-01 | 0.02 |
728658 | RPL13AP5 | male-WTA | Human | Thyroid | PTC | 4.37e-46 | -5.90e-02 | 0.1037 |
728658 | RPL13AP5 | PTC01 | Human | Thyroid | PTC | 2.31e-12 | -5.12e-01 | 0.1899 |
728658 | RPL13AP5 | PTC03 | Human | Thyroid | PTC | 2.21e-02 | -5.12e-01 | 0.1784 |
728658 | RPL13AP5 | PTC04 | Human | Thyroid | PTC | 4.25e-14 | -5.12e-01 | 0.1927 |
728658 | RPL13AP5 | PTC05 | Human | Thyroid | PTC | 1.46e-02 | -5.12e-01 | 0.2065 |
728658 | RPL13AP5 | PTC06 | Human | Thyroid | PTC | 2.76e-07 | -5.12e-01 | 0.2057 |
728658 | RPL13AP5 | PTC07 | Human | Thyroid | PTC | 2.12e-13 | -5.12e-01 | 0.2044 |
728658 | RPL13AP5 | ATC08 | Human | Thyroid | ATC | 3.87e-02 | -5.12e-01 | 0.0541 |
728658 | RPL13AP5 | ATC09 | Human | Thyroid | ATC | 9.70e-03 | -5.12e-01 | 0.2871 |
728658 | RPL13AP5 | ATC12 | Human | Thyroid | ATC | 4.70e-13 | -5.12e-01 | 0.34 |
728658 | RPL13AP5 | ATC13 | Human | Thyroid | ATC | 2.12e-13 | -5.12e-01 | 0.34 |
728658 | RPL13AP5 | ATC4 | Human | Thyroid | ATC | 5.14e-11 | -5.12e-01 | 0.34 |
728658 | RPL13AP5 | ATC5 | Human | Thyroid | ATC | 5.45e-11 | -5.12e-01 | 0.34 |
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Tissue | Expression Dynamics | Abbreviation |
Thyroid | ![]() | ATC: Anaplastic thyroid cancer |
HT: Hashimoto's thyroiditis | ||
PTC: Papillary thyroid cancer |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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