Tissue | Expression Dynamics | Abbreviation |
Breast | | IDC: Invasive ductal carcinoma |
DCIS: Ductal carcinoma in situ |
Precancer(BRCA1-mut): Precancerous lesion from BRCA1 mutation carriers |
Cervix | | CC: Cervix cancer |
HSIL_HPV: HPV-infected high-grade squamous intraepithelial lesions |
N_HPV: HPV-infected normal cervix |
Colorectum (GSE201348) | | FAP: Familial adenomatous polyposis |
CRC: Colorectal cancer |
Colorectum (HTA11) | | AD: Adenomas |
SER: Sessile serrated lesions |
MSI-H: Microsatellite-high colorectal cancer |
MSS: Microsatellite stable colorectal cancer |
Endometrium | | AEH: Atypical endometrial hyperplasia |
EEC: Endometrioid Cancer |
Esophagus | | ESCC: Esophageal squamous cell carcinoma |
HGIN: High-grade intraepithelial neoplasias |
LGIN: Low-grade intraepithelial neoplasias |
Liver | | HCC: Hepatocellular carcinoma |
NAFLD: Non-alcoholic fatty liver disease |
Lung | | AAH: Atypical adenomatous hyperplasia |
AIS: Adenocarcinoma in situ |
IAC: Invasive lung adenocarcinoma |
MIA: Minimally invasive adenocarcinoma |
Oral Cavity | | EOLP: Erosive Oral lichen planus |
LP: leukoplakia |
NEOLP: Non-erosive oral lichen planus |
OSCC: Oral squamous cell carcinoma |
Prostate | | BPH: Benign Prostatic Hyperplasia |
Skin | | AK: Actinic keratosis |
cSCC: Cutaneous squamous cell carcinoma |
SCCIS:squamous cell carcinoma in situ |
Thyroid | | ATC: Anaplastic thyroid cancer |
HT: Hashimoto's thyroiditis |
PTC: Papillary thyroid cancer |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
GO:00017017 | Breast | Precancer | in utero embryonic development | 35/1080 | 367/18723 | 2.47e-03 | 2.27e-02 | 35 |
GO:000170113 | Breast | IDC | in utero embryonic development | 42/1434 | 367/18723 | 5.85e-03 | 4.24e-02 | 42 |
GO:000170122 | Breast | DCIS | in utero embryonic development | 41/1390 | 367/18723 | 5.74e-03 | 4.13e-02 | 41 |
GO:20007362 | Cervix | CC | regulation of stem cell differentiation | 19/2311 | 58/18723 | 4.01e-05 | 6.21e-04 | 19 |
GO:00488634 | Cervix | CC | stem cell differentiation | 46/2311 | 206/18723 | 4.11e-05 | 6.36e-04 | 46 |
GO:00017018 | Cervix | CC | in utero embryonic development | 71/2311 | 367/18723 | 7.21e-05 | 1.00e-03 | 71 |
GO:20007372 | Cervix | CC | negative regulation of stem cell differentiation | 10/2311 | 23/18723 | 2.00e-04 | 2.29e-03 | 10 |
GO:00022443 | Cervix | CC | hematopoietic progenitor cell differentiation | 26/2311 | 114/18723 | 1.30e-03 | 1.03e-02 | 26 |
GO:0060218 | Cervix | CC | hematopoietic stem cell differentiation | 10/2311 | 30/18723 | 2.33e-03 | 1.66e-02 | 10 |
GO:1901532 | Cervix | CC | regulation of hematopoietic progenitor cell differentiation | 10/2311 | 32/18723 | 3.96e-03 | 2.48e-02 | 10 |
GO:1902036 | Cervix | CC | regulation of hematopoietic stem cell differentiation | 6/2311 | 14/18723 | 4.36e-03 | 2.67e-02 | 6 |
GO:004886313 | Cervix | N_HPV | stem cell differentiation | 14/534 | 206/18723 | 2.43e-03 | 2.20e-02 | 14 |
GO:200073711 | Cervix | N_HPV | negative regulation of stem cell differentiation | 4/534 | 23/18723 | 3.76e-03 | 3.00e-02 | 4 |
GO:200073611 | Cervix | N_HPV | regulation of stem cell differentiation | 6/534 | 58/18723 | 6.04e-03 | 4.17e-02 | 6 |
GO:0001701 | Colorectum | AD | in utero embryonic development | 110/3918 | 367/18723 | 2.36e-05 | 4.62e-04 | 110 |
GO:00017012 | Colorectum | MSS | in utero embryonic development | 99/3467 | 367/18723 | 3.71e-05 | 7.10e-04 | 99 |
GO:0002244 | Colorectum | MSS | hematopoietic progenitor cell differentiation | 32/3467 | 114/18723 | 8.07e-03 | 4.91e-02 | 32 |
GO:00017013 | Colorectum | FAP | in utero embryonic development | 81/2622 | 367/18723 | 1.58e-05 | 4.10e-04 | 81 |
GO:00022441 | Colorectum | FAP | hematopoietic progenitor cell differentiation | 29/2622 | 114/18723 | 8.35e-04 | 8.71e-03 | 29 |
GO:0048863 | Colorectum | FAP | stem cell differentiation | 44/2622 | 206/18723 | 2.48e-03 | 1.96e-02 | 44 |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
N4BP2L2 | SNV | Missense_Mutation | | c.907N>T | p.His303Tyr | p.H303Y | Q92802 | protein_coding | deleterious(0.02) | benign(0.047) | TCGA-A2-A0D4-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Chemotherapy | adriamycin | SD |
N4BP2L2 | SNV | Missense_Mutation | novel | c.1801N>A | p.His601Asn | p.H601N | Q92802 | protein_coding | deleterious(0.03) | benign(0.08) | TCGA-AC-A3TM-01 | Breast | breast invasive carcinoma | Female | <65 | III/IV | Chemotherapy | cytoxan | CR |
N4BP2L2 | SNV | Missense_Mutation | novel | c.1452T>A | p.Asn484Lys | p.N484K | Q92802 | protein_coding | deleterious(0.02) | benign(0.007) | TCGA-BH-A0BO-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
N4BP2L2 | SNV | Missense_Mutation | | c.294N>C | p.Lys98Asn | p.K98N | Q92802 | protein_coding | deleterious(0) | probably_damaging(1) | TCGA-BH-A209-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD |
N4BP2L2 | insertion | Frame_Shift_Ins | novel | c.105_106insCTTTTTACTTTGTGCTTTCATGTTGCTCCCACTTT | p.Ala36LeufsTer22 | p.A36Lfs*22 | Q92802 | protein_coding | | | TCGA-AR-A0TY-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Unspecific | Paclitaxel | PD |
N4BP2L2 | SNV | Missense_Mutation | | c.1861G>A | p.Glu621Lys | p.E621K | Q92802 | protein_coding | tolerated(1) | benign(0) | TCGA-2W-A8YY-01 | Cervix | cervical & endocervical cancer | Female | <65 | I/II | Chemotherapy | cisplatin | CR |
N4BP2L2 | SNV | Missense_Mutation | novel | c.172C>T | p.Pro58Ser | p.P58S | Q92802 | protein_coding | deleterious(0) | probably_damaging(0.998) | TCGA-MA-AA42-01 | Cervix | cervical & endocervical cancer | Female | >=65 | I/II | Unknown | Unknown | SD |
N4BP2L2 | SNV | Missense_Mutation | novel | c.459N>T | p.Gln153His | p.Q153H | Q92802 | protein_coding | deleterious(0) | possibly_damaging(0.61) | TCGA-VS-A94Z-01 | Cervix | cervical & endocervical cancer | Female | <65 | I/II | Chemotherapy | cisplatin | CR |
N4BP2L2 | insertion | Frame_Shift_Ins | novel | c.1700dupC | p.Leu568PhefsTer4 | p.L568Ffs*4 | Q92802 | protein_coding | | | TCGA-2W-A8YY-01 | Cervix | cervical & endocervical cancer | Female | <65 | I/II | Chemotherapy | cisplatin | CR |
N4BP2L2 | SNV | Missense_Mutation | | c.230C>G | p.Thr77Ser | p.T77S | Q92802 | protein_coding | deleterious(0) | probably_damaging(0.999) | TCGA-A6-2684-01 | Colorectum | colon adenocarcinoma | Female | >=65 | I/II | Unknown | Unknown | PD |