![]() |
|||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Gene: LINC01420 |
Gene summary for LINC01420 |
![]() |
Gene information | Species | Human | Gene symbol | LINC01420 | Gene ID | 550643 |
Gene name | negative regulator of P-body association | |
Gene Alias | LINC01420 | |
Cytomap | Xp11.21 | |
Gene Type | protein-coding | GO ID | GO:0000956 | UniProtAcc | A0A0U1RRE5 |
Top |
Malignant transformation analysis |
![]() |
![]() |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
550643 | LINC01420 | HTA11_99999970781_79442 | Human | Colorectum | MSS | 1.09e-16 | 3.51e-01 | 0.294 |
550643 | LINC01420 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 6.73e-31 | 8.31e-01 | 0.281 |
550643 | LINC01420 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 1.75e-18 | 4.16e-01 | 0.3859 |
550643 | LINC01420 | HTA11_99999973899_84307 | Human | Colorectum | MSS | 5.51e-09 | 3.61e-01 | 0.2585 |
550643 | LINC01420 | HTA11_99999974143_84620 | Human | Colorectum | MSS | 3.17e-28 | 5.33e-01 | 0.3005 |
550643 | LINC01420 | AEH-subject1 | Human | Endometrium | AEH | 1.36e-43 | -5.48e-01 | -0.3059 |
550643 | LINC01420 | AEH-subject2 | Human | Endometrium | AEH | 8.92e-34 | -5.48e-01 | -0.2525 |
550643 | LINC01420 | AEH-subject3 | Human | Endometrium | AEH | 4.92e-44 | -5.48e-01 | -0.2576 |
550643 | LINC01420 | AEH-subject4 | Human | Endometrium | AEH | 2.72e-26 | -5.48e-01 | -0.2657 |
550643 | LINC01420 | AEH-subject5 | Human | Endometrium | AEH | 4.92e-44 | -5.48e-01 | -0.2953 |
550643 | LINC01420 | EEC-subject1 | Human | Endometrium | EEC | 4.11e-40 | -5.48e-01 | -0.2682 |
550643 | LINC01420 | EEC-subject2 | Human | Endometrium | EEC | 4.92e-44 | -5.48e-01 | -0.2607 |
550643 | LINC01420 | EEC-subject3 | Human | Endometrium | EEC | 1.36e-43 | -5.48e-01 | -0.2525 |
550643 | LINC01420 | EEC-subject4 | Human | Endometrium | EEC | 8.08e-46 | -5.48e-01 | -0.2571 |
550643 | LINC01420 | EEC-subject5 | Human | Endometrium | EEC | 2.82e-42 | -5.48e-01 | -0.249 |
550643 | LINC01420 | GSM5276934 | Human | Endometrium | EEC | 1.77e-44 | -5.48e-01 | -0.0913 |
550643 | LINC01420 | GSM5276935 | Human | Endometrium | EEC | 7.70e-42 | -5.48e-01 | -0.123 |
550643 | LINC01420 | GSM5276937 | Human | Endometrium | EEC | 8.24e-32 | -5.48e-01 | -0.0897 |
550643 | LINC01420 | GSM6177620_NYU_UCEC1_lib1_lib1 | Human | Endometrium | EEC | 9.29e-28 | -5.48e-01 | -0.1869 |
550643 | LINC01420 | GSM6177620_NYU_UCEC1_lib2_lib2 | Human | Endometrium | EEC | 8.81e-25 | -5.48e-01 | -0.1875 |
Page: 1 2 3 4 5 6 |
![]() |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
Top |
Malignant transformation related pathway analysis |
![]() |
![]() |
Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
![]() |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
![]() |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
Top |
Cell-cell communication analysis |
![]() |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
Top |
Single-cell gene regulatory network inference analysis |
![]() |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
Top |
Somatic mutation of malignant transformation related genes |
![]() |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
Top |
Related drugs of malignant transformation related genes |
![]() |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
Page: 1 |