![]() |
|||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Gene: LINC01091 |
Gene summary for LINC01091 |
![]() |
Gene information | Species | Human | Gene symbol | LINC01091 | Gene ID | 285419 |
Gene name | long intergenic non-protein coding RNA 1091 | |
Gene Alias | LINC01091 | |
Cytomap | 4q28.1 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
Top |
Malignant transformation analysis |
![]() |
![]() |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
285419 | LINC01091 | HTA11_347_2000001011 | Human | Colorectum | AD | 2.82e-02 | 1.17e-01 | -0.1954 |
285419 | LINC01091 | HTA11_99999970781_79442 | Human | Colorectum | MSS | 2.20e-05 | 2.59e-01 | 0.294 |
285419 | LINC01091 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 5.27e-12 | 6.10e-01 | 0.281 |
285419 | LINC01091 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 1.35e-08 | 3.68e-01 | 0.3859 |
285419 | LINC01091 | HTA11_99999974143_84620 | Human | Colorectum | MSS | 1.09e-10 | 3.73e-01 | 0.3005 |
285419 | LINC01091 | A002-C-203 | Human | Colorectum | FAP | 8.37e-08 | 3.39e-01 | 0.2786 |
285419 | LINC01091 | A001-C-104 | Human | Colorectum | FAP | 1.67e-02 | 3.20e-01 | 0.0184 |
285419 | LINC01091 | F072B | Human | Colorectum | FAP | 1.75e-29 | 9.07e-01 | 0.257 |
285419 | LINC01091 | CRC-1-8810 | Human | Colorectum | CRC | 1.19e-05 | 3.43e-01 | 0.6257 |
285419 | LINC01091 | RNA-P17T-P17T-2 | Human | Lung | IAC | 1.99e-06 | 6.37e-01 | 0.3371 |
285419 | LINC01091 | RNA-P17T-P17T-4 | Human | Lung | IAC | 4.28e-05 | 5.35e-01 | 0.343 |
285419 | LINC01091 | RNA-P17T-P17T-6 | Human | Lung | IAC | 4.28e-05 | 6.02e-01 | 0.3385 |
285419 | LINC01091 | RNA-P25T1-P25T1-3 | Human | Lung | AIS | 9.09e-03 | 3.93e-01 | -0.2107 |
285419 | LINC01091 | RNA-P6T1-P6T1-1 | Human | Lung | MIAC | 1.04e-04 | 8.89e-01 | -0.0238 |
285419 | LINC01091 | RNA-P6T1-P6T1-2 | Human | Lung | MIAC | 1.55e-04 | 7.21e-01 | -0.0186 |
285419 | LINC01091 | RNA-P6T1-P6T1-3 | Human | Lung | MIAC | 6.04e-07 | 1.09e+00 | -0.0296 |
285419 | LINC01091 | RNA-P6T1-P6T1-4 | Human | Lung | MIAC | 3.02e-07 | 1.02e+00 | -0.0263 |
285419 | LINC01091 | RNA-P6T2-P6T2-1 | Human | Lung | IAC | 2.31e-14 | 4.94e-01 | -0.0166 |
285419 | LINC01091 | RNA-P6T2-P6T2-2 | Human | Lung | IAC | 3.46e-17 | 5.30e-01 | -0.0132 |
285419 | LINC01091 | RNA-P6T2-P6T2-3 | Human | Lung | IAC | 1.84e-18 | 5.47e-01 | -0.013 |
Page: 1 2 |
![]() |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
Top |
Malignant transformation related pathway analysis |
![]() |
![]() |
Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
![]() |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
![]() |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
Top |
Cell-cell communication analysis |
![]() |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
Top |
Single-cell gene regulatory network inference analysis |
![]() |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
Top |
Somatic mutation of malignant transformation related genes |
![]() |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
Top |
Related drugs of malignant transformation related genes |
![]() |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
Page: 1 |