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Gene: LINC00969 |
Gene summary for LINC00969 |
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Gene information | Species | Human | Gene symbol | LINC00969 | Gene ID | 440993 |
Gene name | MIR570 host gene | |
Gene Alias | LINC00969 | |
Cytomap | 3q29 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
440993 | LINC00969 | HTA11_99999970781_79442 | Human | Colorectum | MSS | 4.96e-35 | 6.15e-01 | 0.294 |
440993 | LINC00969 | HTA11_99999965062_69753 | Human | Colorectum | MSI-H | 7.58e-24 | 1.93e+00 | 0.3487 |
440993 | LINC00969 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 3.89e-44 | 1.15e+00 | 0.281 |
440993 | LINC00969 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 2.48e-66 | 1.38e+00 | 0.3859 |
440993 | LINC00969 | HTA11_99999973899_84307 | Human | Colorectum | MSS | 1.05e-12 | 3.99e-01 | 0.2585 |
440993 | LINC00969 | HTA11_99999974143_84620 | Human | Colorectum | MSS | 6.56e-26 | 4.95e-01 | 0.3005 |
440993 | LINC00969 | AEH-subject1 | Human | Endometrium | AEH | 2.86e-46 | -6.18e-01 | -0.3059 |
440993 | LINC00969 | AEH-subject2 | Human | Endometrium | AEH | 9.60e-41 | -6.18e-01 | -0.2525 |
440993 | LINC00969 | AEH-subject3 | Human | Endometrium | AEH | 8.08e-46 | -6.18e-01 | -0.2576 |
440993 | LINC00969 | AEH-subject4 | Human | Endometrium | AEH | 6.14e-32 | -6.18e-01 | -0.2657 |
440993 | LINC00969 | AEH-subject5 | Human | Endometrium | AEH | 8.08e-46 | -6.18e-01 | -0.2953 |
440993 | LINC00969 | EEC-subject1 | Human | Endometrium | EEC | 2.86e-46 | -6.18e-01 | -0.2682 |
440993 | LINC00969 | EEC-subject2 | Human | Endometrium | EEC | 6.20e-50 | -6.18e-01 | -0.2607 |
440993 | LINC00969 | EEC-subject3 | Human | Endometrium | EEC | 1.01e-46 | -6.18e-01 | -0.2525 |
440993 | LINC00969 | EEC-subject4 | Human | Endometrium | EEC | 4.35e-48 | -6.18e-01 | -0.2571 |
440993 | LINC00969 | EEC-subject5 | Human | Endometrium | EEC | 1.51e-48 | -6.18e-01 | -0.249 |
440993 | LINC00969 | GSM5276934 | Human | Endometrium | EEC | 2.86e-46 | -6.18e-01 | -0.0913 |
440993 | LINC00969 | GSM5276935 | Human | Endometrium | EEC | 1.01e-46 | -6.18e-01 | -0.123 |
440993 | LINC00969 | GSM5276937 | Human | Endometrium | EEC | 1.96e-38 | -6.18e-01 | -0.0897 |
440993 | LINC00969 | GSM6177620_NYU_UCEC1_lib1_lib1 | Human | Endometrium | EEC | 1.15e-33 | -6.18e-01 | -0.1869 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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