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Gene: LINC00665 |
Gene summary for LINC00665 |
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Gene information | Species | Human | Gene symbol | LINC00665 | Gene ID | 100506930 |
Gene name | long intergenic non-protein coding RNA 665 | |
Gene Alias | CIP2A-BP | |
Cytomap | 19q13.12 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100506930 | LINC00665 | P1T-E | Human | Esophagus | ESCC | 2.35e-04 | 2.94e-01 | 0.0875 |
100506930 | LINC00665 | P2T-E | Human | Esophagus | ESCC | 2.25e-13 | 3.09e-01 | 0.1177 |
100506930 | LINC00665 | P5T-E | Human | Esophagus | ESCC | 4.32e-07 | 2.24e-01 | 0.1327 |
100506930 | LINC00665 | P8T-E | Human | Esophagus | ESCC | 1.05e-06 | 1.92e-01 | 0.0889 |
100506930 | LINC00665 | P10T-E | Human | Esophagus | ESCC | 5.57e-70 | 1.17e+00 | 0.116 |
100506930 | LINC00665 | P11T-E | Human | Esophagus | ESCC | 2.66e-13 | 5.66e-01 | 0.1426 |
100506930 | LINC00665 | P12T-E | Human | Esophagus | ESCC | 5.10e-31 | 5.45e-01 | 0.1122 |
100506930 | LINC00665 | P15T-E | Human | Esophagus | ESCC | 1.83e-34 | 6.31e-01 | 0.1149 |
100506930 | LINC00665 | P16T-E | Human | Esophagus | ESCC | 8.16e-33 | 6.77e-01 | 0.1153 |
100506930 | LINC00665 | P17T-E | Human | Esophagus | ESCC | 1.44e-02 | 1.71e-01 | 0.1278 |
100506930 | LINC00665 | P19T-E | Human | Esophagus | ESCC | 2.24e-08 | 1.15e+00 | 0.1662 |
100506930 | LINC00665 | P21T-E | Human | Esophagus | ESCC | 3.87e-14 | 3.39e-01 | 0.1617 |
100506930 | LINC00665 | P22T-E | Human | Esophagus | ESCC | 6.61e-22 | 3.10e-01 | 0.1236 |
100506930 | LINC00665 | P24T-E | Human | Esophagus | ESCC | 9.65e-15 | 3.90e-01 | 0.1287 |
100506930 | LINC00665 | P27T-E | Human | Esophagus | ESCC | 1.27e-11 | 2.49e-01 | 0.1055 |
100506930 | LINC00665 | P28T-E | Human | Esophagus | ESCC | 8.14e-34 | 6.39e-01 | 0.1149 |
100506930 | LINC00665 | P30T-E | Human | Esophagus | ESCC | 1.34e-24 | 6.90e-01 | 0.137 |
100506930 | LINC00665 | P31T-E | Human | Esophagus | ESCC | 1.42e-08 | 2.14e-01 | 0.1251 |
100506930 | LINC00665 | P38T-E | Human | Esophagus | ESCC | 1.41e-24 | 8.57e-01 | 0.127 |
100506930 | LINC00665 | P39T-E | Human | Esophagus | ESCC | 3.77e-09 | 2.41e-01 | 0.0894 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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