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Gene: LINC00152 |
Gene summary for LINC00152 |
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Gene information | Species | Human | Gene symbol | LINC00152 | Gene ID | 112597 |
Gene name | cytoskeleton regulator RNA | |
Gene Alias | C2orf59 | |
Cytomap | 2p11.2 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
112597 | LINC00152 | P2T-E | Human | Esophagus | ESCC | 2.96e-24 | 4.26e-01 | 0.1177 |
112597 | LINC00152 | P4T-E | Human | Esophagus | ESCC | 8.82e-14 | 5.32e-01 | 0.1323 |
112597 | LINC00152 | P5T-E | Human | Esophagus | ESCC | 2.17e-31 | 7.21e-01 | 0.1327 |
112597 | LINC00152 | P8T-E | Human | Esophagus | ESCC | 4.03e-17 | 3.63e-01 | 0.0889 |
112597 | LINC00152 | P9T-E | Human | Esophagus | ESCC | 1.90e-08 | 6.31e-01 | 0.1131 |
112597 | LINC00152 | P10T-E | Human | Esophagus | ESCC | 8.66e-21 | 4.11e-01 | 0.116 |
112597 | LINC00152 | P11T-E | Human | Esophagus | ESCC | 9.81e-11 | 8.09e-01 | 0.1426 |
112597 | LINC00152 | P12T-E | Human | Esophagus | ESCC | 1.89e-02 | 4.62e-02 | 0.1122 |
112597 | LINC00152 | P15T-E | Human | Esophagus | ESCC | 1.46e-10 | 4.62e-01 | 0.1149 |
112597 | LINC00152 | P17T-E | Human | Esophagus | ESCC | 5.22e-07 | 7.73e-01 | 0.1278 |
112597 | LINC00152 | P19T-E | Human | Esophagus | ESCC | 2.74e-02 | 7.23e-01 | 0.1662 |
112597 | LINC00152 | P21T-E | Human | Esophagus | ESCC | 1.51e-22 | 5.73e-01 | 0.1617 |
112597 | LINC00152 | P24T-E | Human | Esophagus | ESCC | 3.84e-31 | 5.42e-01 | 0.1287 |
112597 | LINC00152 | P26T-E | Human | Esophagus | ESCC | 1.75e-14 | 3.50e-01 | 0.1276 |
112597 | LINC00152 | P30T-E | Human | Esophagus | ESCC | 1.45e-17 | 8.72e-01 | 0.137 |
112597 | LINC00152 | P31T-E | Human | Esophagus | ESCC | 2.10e-07 | 1.99e-01 | 0.1251 |
112597 | LINC00152 | P32T-E | Human | Esophagus | ESCC | 3.76e-35 | 7.93e-01 | 0.1666 |
112597 | LINC00152 | P36T-E | Human | Esophagus | ESCC | 5.86e-12 | 6.38e-01 | 0.1187 |
112597 | LINC00152 | P37T-E | Human | Esophagus | ESCC | 5.44e-11 | 4.75e-01 | 0.1371 |
112597 | LINC00152 | P38T-E | Human | Esophagus | ESCC | 9.78e-11 | 6.88e-01 | 0.127 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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