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Gene: LINC00106 |
Gene summary for LINC00106 |
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Gene information | Species | Human | Gene symbol | LINC00106 | Gene ID | 751580 |
Gene name | long intergenic non-protein coding RNA 106 | |
Gene Alias | CXYorf8 | |
Cytomap | X | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
751580 | LINC00106 | HTA11_3410_2000001011 | Human | Colorectum | AD | 7.42e-03 | 1.44e-01 | 0.0155 |
751580 | LINC00106 | HTA11_1938_2000001011 | Human | Colorectum | AD | 6.03e-05 | 2.37e-01 | -0.0811 |
751580 | LINC00106 | HTA11_347_2000001011 | Human | Colorectum | AD | 3.42e-05 | 1.94e-01 | -0.1954 |
751580 | LINC00106 | HTA11_696_2000001011 | Human | Colorectum | AD | 3.84e-12 | 3.96e-01 | -0.1464 |
751580 | LINC00106 | HTA11_866_2000001011 | Human | Colorectum | AD | 7.39e-03 | 2.98e-01 | -0.1001 |
751580 | LINC00106 | HTA11_1391_2000001011 | Human | Colorectum | AD | 1.11e-07 | 3.17e-01 | -0.059 |
751580 | LINC00106 | HTA11_546_2000001011 | Human | Colorectum | AD | 1.54e-03 | 2.95e-01 | -0.0842 |
751580 | LINC00106 | HTA11_866_3004761011 | Human | Colorectum | AD | 6.25e-03 | 1.95e-01 | 0.096 |
751580 | LINC00106 | HTA11_10711_2000001011 | Human | Colorectum | AD | 4.79e-12 | 4.59e-01 | 0.0338 |
751580 | LINC00106 | HTA11_7696_3000711011 | Human | Colorectum | AD | 1.18e-03 | 2.49e-01 | 0.0674 |
751580 | LINC00106 | HTA11_6818_2000001011 | Human | Colorectum | AD | 4.61e-05 | 4.70e-01 | 0.0112 |
751580 | LINC00106 | HTA11_99999973899_84307 | Human | Colorectum | MSS | 1.12e-06 | 5.35e-01 | 0.2585 |
751580 | LINC00106 | HTA11_99999974143_84620 | Human | Colorectum | MSS | 3.38e-03 | 2.86e-01 | 0.3005 |
751580 | LINC00106 | A015-C-202 | Human | Colorectum | FAP | 3.25e-04 | 2.15e-01 | -0.0849 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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