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Gene: LHFPL3-AS2 |
Gene summary for LHFPL3-AS2 |
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Gene information | Species | Human | Gene symbol | LHFPL3-AS2 | Gene ID | 723809 |
Gene name | LHFPL3 antisense RNA 2 | |
Gene Alias | LHFPL3-AS2 | |
Cytomap | 7q22.2-q22.3 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
723809 | LHFPL3-AS2 | HTA11_3410_2000001011 | Human | Colorectum | AD | 3.35e-15 | 3.20e-01 | 0.0155 |
723809 | LHFPL3-AS2 | HTA11_2487_2000001011 | Human | Colorectum | SER | 1.03e-09 | 3.32e-01 | -0.1808 |
723809 | LHFPL3-AS2 | HTA11_1938_2000001011 | Human | Colorectum | AD | 1.67e-02 | 2.32e-01 | -0.0811 |
723809 | LHFPL3-AS2 | HTA11_78_2000001011 | Human | Colorectum | AD | 2.65e-10 | 3.65e-01 | -0.1088 |
723809 | LHFPL3-AS2 | HTA11_83_2000001011 | Human | Colorectum | SER | 2.45e-18 | 7.05e-01 | -0.1526 |
723809 | LHFPL3-AS2 | HTA11_866_2000001011 | Human | Colorectum | AD | 8.13e-03 | 1.35e-01 | -0.1001 |
723809 | LHFPL3-AS2 | HTA11_1391_2000001011 | Human | Colorectum | AD | 4.56e-17 | 5.14e-01 | -0.059 |
723809 | LHFPL3-AS2 | HTA11_546_2000001011 | Human | Colorectum | AD | 2.76e-07 | 3.33e-01 | -0.0842 |
723809 | LHFPL3-AS2 | HTA11_9341_2000001011 | Human | Colorectum | SER | 1.86e-06 | 5.05e-01 | -0.00410000000000005 |
723809 | LHFPL3-AS2 | HTA11_4255_2000001011 | Human | Colorectum | SER | 2.49e-08 | 4.90e-01 | 0.0446 |
723809 | LHFPL3-AS2 | HTA11_8622_2000001021 | Human | Colorectum | SER | 4.45e-03 | 2.67e-01 | 0.0528 |
723809 | LHFPL3-AS2 | HTA11_7663_2000001011 | Human | Colorectum | SER | 7.22e-10 | 5.85e-01 | 0.0131 |
723809 | LHFPL3-AS2 | HTA11_10623_2000001011 | Human | Colorectum | AD | 2.05e-04 | 2.63e-01 | -0.0177 |
723809 | LHFPL3-AS2 | HTA11_6801_2000001011 | Human | Colorectum | SER | 2.10e-14 | 9.63e-01 | 0.0171 |
723809 | LHFPL3-AS2 | HTA11_10711_2000001011 | Human | Colorectum | AD | 1.67e-03 | 2.76e-01 | 0.0338 |
723809 | LHFPL3-AS2 | HTA11_7469_2000001011 | Human | Colorectum | AD | 3.81e-02 | 4.55e-01 | -0.0124 |
723809 | LHFPL3-AS2 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 9.32e-14 | 6.47e-01 | 0.281 |
723809 | LHFPL3-AS2 | RNA-P25T1-P25T1-1 | Human | Lung | AIS | 1.89e-25 | 1.25e+00 | -0.2116 |
723809 | LHFPL3-AS2 | RNA-P25T1-P25T1-2 | Human | Lung | AIS | 8.32e-08 | 1.16e+00 | -0.1941 |
723809 | LHFPL3-AS2 | RNA-P25T1-P25T1-3 | Human | Lung | AIS | 8.96e-10 | 9.98e-01 | -0.2107 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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