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Gene: C1QTNF3-AMACR |
Gene summary for C1QTNF3-AMACR |
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Gene information | Species | Human | Gene symbol | C1QTNF3-AMACR | Gene ID | 100534612 |
Gene name | C1QTNF3-AMACR readthrough (NMD candidate) | |
Gene Alias | C1QTNF3-AMACR | |
Cytomap | 5p13.2 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100534612 | C1QTNF3-AMACR | CCI_1 | Human | Cervix | CC | 3.21e-13 | 9.26e-01 | 0.528 |
100534612 | C1QTNF3-AMACR | CCI_2 | Human | Cervix | CC | 1.93e-04 | 3.35e-01 | 0.5249 |
100534612 | C1QTNF3-AMACR | CCI_3 | Human | Cervix | CC | 4.37e-20 | 1.03e+00 | 0.516 |
100534612 | C1QTNF3-AMACR | HTA11_3410_2000001011 | Human | Colorectum | AD | 7.89e-27 | -6.55e-01 | 0.0155 |
100534612 | C1QTNF3-AMACR | HTA11_2487_2000001011 | Human | Colorectum | SER | 5.97e-16 | -6.55e-01 | -0.1808 |
100534612 | C1QTNF3-AMACR | HTA11_2951_2000001011 | Human | Colorectum | AD | 3.01e-03 | -6.55e-01 | 0.0216 |
100534612 | C1QTNF3-AMACR | HTA11_1938_2000001011 | Human | Colorectum | AD | 4.22e-12 | -6.55e-01 | -0.0811 |
100534612 | C1QTNF3-AMACR | HTA11_78_2000001011 | Human | Colorectum | AD | 9.02e-19 | -6.55e-01 | -0.1088 |
100534612 | C1QTNF3-AMACR | HTA11_347_2000001011 | Human | Colorectum | AD | 8.80e-29 | -6.55e-01 | -0.1954 |
100534612 | C1QTNF3-AMACR | HTA11_2112_2000001011 | Human | Colorectum | SER | 1.19e-02 | -6.55e-01 | -0.2196 |
100534612 | C1QTNF3-AMACR | HTA11_3361_2000001011 | Human | Colorectum | AD | 1.42e-12 | -6.55e-01 | -0.1207 |
100534612 | C1QTNF3-AMACR | HTA11_83_2000001011 | Human | Colorectum | SER | 4.95e-10 | -6.55e-01 | -0.1526 |
100534612 | C1QTNF3-AMACR | HTA11_696_2000001011 | Human | Colorectum | AD | 1.38e-32 | -6.55e-01 | -0.1464 |
100534612 | C1QTNF3-AMACR | HTA11_866_2000001011 | Human | Colorectum | AD | 5.54e-31 | -6.55e-01 | -0.1001 |
100534612 | C1QTNF3-AMACR | HTA11_1391_2000001011 | Human | Colorectum | AD | 8.63e-22 | -6.55e-01 | -0.059 |
100534612 | C1QTNF3-AMACR | HTA11_2992_2000001011 | Human | Colorectum | SER | 2.05e-04 | -6.55e-01 | -0.1706 |
100534612 | C1QTNF3-AMACR | HTA11_5212_2000001011 | Human | Colorectum | AD | 2.88e-05 | -6.55e-01 | -0.2061 |
100534612 | C1QTNF3-AMACR | HTA11_5216_2000001011 | Human | Colorectum | SER | 3.01e-03 | -6.55e-01 | -0.1462 |
100534612 | C1QTNF3-AMACR | HTA11_546_2000001011 | Human | Colorectum | AD | 1.23e-08 | -6.55e-01 | -0.0842 |
100534612 | C1QTNF3-AMACR | HTA11_7862_2000001011 | Human | Colorectum | AD | 6.41e-07 | -6.55e-01 | -0.0179 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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