![]() |
|||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Gene: SLC30A9 |
Gene summary for SLC30A9 |
![]() |
Gene information | Species | Human | Gene symbol | SLC30A9 | Gene ID | 10463 |
Gene name | solute carrier family 30 member 9 | |
Gene Alias | BILAPES | |
Cytomap | 4p13 | |
Gene Type | protein-coding | GO ID | GO:0000041 | UniProtAcc | A0A0S2Z514 |
Top |
Malignant transformation analysis |
![]() |
![]() |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
10463 | SLC30A9 | LZE4T | Human | Esophagus | ESCC | 3.74e-07 | 2.63e-01 | 0.0811 |
10463 | SLC30A9 | LZE7T | Human | Esophagus | ESCC | 4.94e-07 | 6.54e-01 | 0.0667 |
10463 | SLC30A9 | LZE8T | Human | Esophagus | ESCC | 7.15e-03 | 2.68e-01 | 0.067 |
10463 | SLC30A9 | LZE20T | Human | Esophagus | ESCC | 1.84e-05 | 2.53e-01 | 0.0662 |
10463 | SLC30A9 | LZE24T | Human | Esophagus | ESCC | 5.18e-11 | 2.83e-01 | 0.0596 |
10463 | SLC30A9 | LZE6T | Human | Esophagus | ESCC | 1.82e-02 | 3.30e-01 | 0.0845 |
10463 | SLC30A9 | P1T-E | Human | Esophagus | ESCC | 5.78e-10 | 3.71e-01 | 0.0875 |
10463 | SLC30A9 | P2T-E | Human | Esophagus | ESCC | 2.06e-30 | 6.24e-01 | 0.1177 |
10463 | SLC30A9 | P4T-E | Human | Esophagus | ESCC | 1.96e-29 | 5.40e-01 | 0.1323 |
10463 | SLC30A9 | P5T-E | Human | Esophagus | ESCC | 7.57e-12 | 1.04e-01 | 0.1327 |
10463 | SLC30A9 | P8T-E | Human | Esophagus | ESCC | 7.48e-25 | 4.64e-01 | 0.0889 |
10463 | SLC30A9 | P9T-E | Human | Esophagus | ESCC | 1.33e-07 | 1.70e-01 | 0.1131 |
10463 | SLC30A9 | P10T-E | Human | Esophagus | ESCC | 1.41e-22 | 2.81e-01 | 0.116 |
10463 | SLC30A9 | P11T-E | Human | Esophagus | ESCC | 3.63e-17 | 6.79e-01 | 0.1426 |
10463 | SLC30A9 | P12T-E | Human | Esophagus | ESCC | 1.03e-18 | 3.97e-01 | 0.1122 |
10463 | SLC30A9 | P15T-E | Human | Esophagus | ESCC | 3.71e-08 | 2.97e-01 | 0.1149 |
10463 | SLC30A9 | P16T-E | Human | Esophagus | ESCC | 4.60e-33 | 6.29e-01 | 0.1153 |
10463 | SLC30A9 | P17T-E | Human | Esophagus | ESCC | 3.74e-05 | 2.36e-01 | 0.1278 |
10463 | SLC30A9 | P19T-E | Human | Esophagus | ESCC | 1.92e-07 | 4.37e-01 | 0.1662 |
10463 | SLC30A9 | P20T-E | Human | Esophagus | ESCC | 1.81e-10 | 2.28e-01 | 0.1124 |
Page: 1 2 3 4 5 6 |
![]() |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
Top |
Malignant transformation related pathway analysis |
![]() |
![]() |
Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
![]() |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
GO:005507617 | Esophagus | ESCC | transition metal ion homeostasis | 87/8552 | 138/18723 | 2.85e-05 | 2.37e-04 | 87 |
GO:00062891 | Esophagus | ESCC | nucleotide-excision repair | 42/8552 | 60/18723 | 1.18e-04 | 8.14e-04 | 42 |
GO:00469169 | Esophagus | ESCC | cellular transition metal ion homeostasis | 70/8552 | 115/18723 | 7.28e-04 | 3.79e-03 | 70 |
GO:00550766 | Liver | Cirrhotic | transition metal ion homeostasis | 59/4634 | 138/18723 | 2.59e-06 | 4.65e-05 | 59 |
GO:00469164 | Liver | Cirrhotic | cellular transition metal ion homeostasis | 48/4634 | 115/18723 | 4.51e-05 | 5.30e-04 | 48 |
GO:00068823 | Liver | Cirrhotic | cellular zinc ion homeostasis | 17/4634 | 38/18723 | 5.62e-03 | 2.84e-02 | 17 |
GO:00550693 | Liver | Cirrhotic | zinc ion homeostasis | 17/4634 | 40/18723 | 1.04e-02 | 4.61e-02 | 17 |
GO:005507612 | Liver | HCC | transition metal ion homeostasis | 81/7958 | 138/18723 | 8.87e-05 | 7.72e-04 | 81 |
GO:004691611 | Liver | HCC | cellular transition metal ion homeostasis | 67/7958 | 115/18723 | 4.64e-04 | 3.08e-03 | 67 |
GO:00000411 | Liver | HCC | transition metal ion transport | 59/7958 | 105/18723 | 3.18e-03 | 1.47e-02 | 59 |
GO:000688212 | Liver | HCC | cellular zinc ion homeostasis | 24/7958 | 38/18723 | 8.20e-03 | 3.22e-02 | 24 |
GO:005507610 | Oral cavity | OSCC | transition metal ion homeostasis | 81/7305 | 138/18723 | 2.13e-06 | 2.72e-05 | 81 |
GO:00469168 | Oral cavity | OSCC | cellular transition metal ion homeostasis | 64/7305 | 115/18723 | 2.13e-04 | 1.40e-03 | 64 |
GO:0006289 | Oral cavity | OSCC | nucleotide-excision repair | 37/7305 | 60/18723 | 3.15e-04 | 1.96e-03 | 37 |
GO:00550695 | Oral cavity | OSCC | zinc ion homeostasis | 24/7305 | 40/18723 | 5.76e-03 | 2.22e-02 | 24 |
GO:00068825 | Oral cavity | OSCC | cellular zinc ion homeostasis | 23/7305 | 38/18723 | 5.87e-03 | 2.24e-02 | 23 |
GO:005507616 | Oral cavity | LP | transition metal ion homeostasis | 54/4623 | 138/18723 | 1.19e-04 | 1.40e-03 | 54 |
GO:004691615 | Oral cavity | LP | cellular transition metal ion homeostasis | 46/4623 | 115/18723 | 2.02e-04 | 2.20e-03 | 46 |
GO:000688213 | Oral cavity | EOLP | cellular zinc ion homeostasis | 11/2218 | 38/18723 | 3.60e-03 | 2.03e-02 | 11 |
GO:005506912 | Oral cavity | EOLP | zinc ion homeostasis | 11/2218 | 40/18723 | 5.53e-03 | 2.86e-02 | 11 |
Page: 1 2 |
![]() |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
Top |
Cell-cell communication analysis |
![]() |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
Top |
Single-cell gene regulatory network inference analysis |
![]() |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
Top |
Somatic mutation of malignant transformation related genes |
![]() |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
SLC30A9 | SNV | Missense_Mutation | novel | c.371N>G | p.Lys124Arg | p.K124R | Q6PML9 | protein_coding | tolerated(0.12) | benign(0.132) | TCGA-P3-A6T3-01 | Oral cavity | head & neck squamous cell carcinoma | Male | <65 | I/II | Chemotherapy | cisplatin | PD |
SLC30A9 | SNV | Missense_Mutation | novel | c.46T>G | p.Ser16Ala | p.S16A | Q6PML9 | protein_coding | tolerated_low_confidence(0.87) | benign(0) | TCGA-QK-A8Z8-01 | Oral cavity | head & neck squamous cell carcinoma | Female | <65 | I/II | Chemotherapy | docetaxel | PD |
SLC30A9 | deletion | Frame_Shift_Del | novel | c.449delN | p.Arg151GlufsTer19 | p.R151Efs*19 | Q6PML9 | protein_coding | TCGA-VP-A879-01 | Prostate | prostate adenocarcinoma | Male | >=65 | 9 | Unknown | Unknown | SD | ||
SLC30A9 | SNV | Missense_Mutation | c.1165A>G | p.Ser389Gly | p.S389G | Q6PML9 | protein_coding | deleterious(0) | benign(0.38) | TCGA-BR-6452-01 | Stomach | stomach adenocarcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
SLC30A9 | SNV | Missense_Mutation | c.1334N>T | p.Asn445Ile | p.N445I | Q6PML9 | protein_coding | deleterious(0) | probably_damaging(0.999) | TCGA-CD-A4MG-01 | Stomach | stomach adenocarcinoma | Male | >=65 | I/II | Unknown | Unknown | PD | |
SLC30A9 | SNV | Missense_Mutation | rs772621304 | c.1355G>A | p.Arg452Gln | p.R452Q | Q6PML9 | protein_coding | deleterious(0.01) | probably_damaging(0.995) | TCGA-HF-7132-01 | Stomach | stomach adenocarcinoma | Male | Unknown | I/II | Chemotherapy | fluorouracil | SD |
SLC30A9 | SNV | Missense_Mutation | c.173T>C | p.Ile58Thr | p.I58T | Q6PML9 | protein_coding | tolerated_low_confidence(0.27) | benign(0.007) | TCGA-VQ-A924-01 | Stomach | stomach adenocarcinoma | Male | >=65 | I/II | Unknown | Unknown | PD | |
SLC30A9 | deletion | Frame_Shift_Del | novel | c.626delN | p.Ile211TyrfsTer2 | p.I211Yfs*2 | Q6PML9 | protein_coding | TCGA-BR-4256-01 | Stomach | stomach adenocarcinoma | Male | >=65 | I/II | Unknown | Unknown | SD | ||
SLC30A9 | deletion | Frame_Shift_Del | c.694delN | p.Phe233LeufsTer8 | p.F233Lfs*8 | Q6PML9 | protein_coding | TCGA-HU-8602-01 | Stomach | stomach adenocarcinoma | Female | <65 | I/II | Chemotherapy | xeloda | CR | |||
SLC30A9 | deletion | Frame_Shift_Del | c.694delN | p.Phe233LeufsTer8 | p.F233Lfs*8 | Q6PML9 | protein_coding | TCGA-VQ-A91E-01 | Stomach | stomach adenocarcinoma | Female | >=65 | III/IV | Chemotherapy | fluorouracil | CR |
Page: 1 2 3 4 5 6 7 |
Top |
Related drugs of malignant transformation related genes |
![]() |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
10463 | SLC30A9 | TRANSPORTER, NUCLEAR HORMONE RECEPTOR | aspirin | ASPIRIN |
Page: 1 |