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Gene: KLK13 |
Gene summary for KLK13 |
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Gene information | Species | Human | Gene symbol | KLK13 | Gene ID | 26085 |
Gene name | kallikrein related peptidase 13 | |
Gene Alias | KLK-L4 | |
Cytomap | 19q13.41 | |
Gene Type | protein-coding | GO ID | GO:0006508 | UniProtAcc | Q5BQ99 |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
26085 | KLK13 | LZE24T | Human | Esophagus | ESCC | 4.29e-20 | 1.09e+00 | 0.0596 |
26085 | KLK13 | P8T-E | Human | Esophagus | ESCC | 4.23e-41 | 1.27e+00 | 0.0889 |
26085 | KLK13 | P27T-E | Human | Esophagus | ESCC | 8.12e-10 | 4.10e-01 | 0.1055 |
26085 | KLK13 | P28T-E | Human | Esophagus | ESCC | 9.03e-15 | 3.61e-01 | 0.1149 |
26085 | KLK13 | P47T-E | Human | Esophagus | ESCC | 2.20e-03 | 2.03e-01 | 0.1067 |
26085 | KLK13 | P61T-E | Human | Esophagus | ESCC | 2.07e-02 | 2.74e-01 | 0.099 |
26085 | KLK13 | P74T-E | Human | Esophagus | ESCC | 8.62e-36 | 2.01e+00 | 0.1479 |
26085 | KLK13 | P127T-E | Human | Esophagus | ESCC | 6.53e-14 | 7.64e-01 | 0.0826 |
26085 | KLK13 | P128T-E | Human | Esophagus | ESCC | 1.29e-23 | 1.02e+00 | 0.1241 |
26085 | KLK13 | C21 | Human | Oral cavity | OSCC | 1.81e-15 | 7.57e-01 | 0.2678 |
26085 | KLK13 | C08 | Human | Oral cavity | OSCC | 3.27e-02 | 1.43e-01 | 0.1919 |
26085 | KLK13 | LP15 | Human | Oral cavity | LP | 6.56e-03 | 1.84e+00 | 0.2174 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
KLK13 | SNV | Missense_Mutation | novel | c.473G>T | p.Arg158Leu | p.R158L | Q9UKR3 | protein_coding | tolerated(1) | benign(0.01) | TCGA-CV-6933-01 | Oral cavity | head & neck squamous cell carcinoma | Male | <65 | III/IV | Unknown | Unknown | SD |
KLK13 | SNV | Missense_Mutation | rs200725984 | c.172N>T | p.Arg58Trp | p.R58W | Q9UKR3 | protein_coding | deleterious(0) | possibly_damaging(0.894) | TCGA-KK-A6E2-01 | Prostate | prostate adenocarcinoma | Male | <65 | 7 | Unknown | Unknown | SD |
KLK13 | SNV | Missense_Mutation | rs776990347 | c.551N>A | p.Arg184His | p.R184H | Q9UKR3 | protein_coding | tolerated(0.34) | possibly_damaging(0.86) | TCGA-BR-8591-01 | Stomach | stomach adenocarcinoma | Male | >=65 | III/IV | Unknown | Unknown | SD |
KLK13 | SNV | Missense_Mutation | c.392N>G | p.Gln131Arg | p.Q131R | Q9UKR3 | protein_coding | tolerated(0.81) | benign(0.007) | TCGA-CG-4465-01 | Stomach | stomach adenocarcinoma | Female | >=65 | III/IV | Chemotherapy | cisplatin | SD | |
KLK13 | insertion | Frame_Shift_Ins | novel | c.720_721insG | p.Gln241AlafsTer3 | p.Q241Afs*3 | Q9UKR3 | protein_coding | TCGA-VQ-A91D-01 | Stomach | stomach adenocarcinoma | Male | >=65 | III/IV | Chemotherapy | fluorouracil | PD |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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