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Gene: ZNF532 |
Gene summary for ZNF532 |
Gene summary. |
Gene information | Species | Human | Gene symbol | ZNF532 | Gene ID | 55205 |
Gene name | zinc finger protein 532 | |
Gene Alias | ZNF532 | |
Cytomap | 18q21.32 | |
Gene Type | protein-coding | GO ID | GO:0005575 | UniProtAcc | A0A024R283 |
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Malignant transformation analysis |
Identification of the aberrant gene expression in precancerous and cancerous lesions by comparing the gene expression of stem-like cells in diseased tissues with normal stem cells |
Malignant transformation involving gene list. |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
55205 | ZNF532 | CCI_1 | Human | Cervix | CC | 2.23e-04 | 5.26e-01 | 0.528 |
55205 | ZNF532 | CCI_2 | Human | Cervix | CC | 1.40e-05 | 5.92e-01 | 0.5249 |
55205 | ZNF532 | CCI_3 | Human | Cervix | CC | 1.06e-18 | 1.10e+00 | 0.516 |
55205 | ZNF532 | 048752_1579-all-cells | Human | Prostate | BPH | 1.04e-08 | 3.66e-01 | 0.1008 |
55205 | ZNF532 | 052095_1628-all-cells | Human | Prostate | BPH | 5.75e-11 | 3.55e-01 | 0.1032 |
55205 | ZNF532 | 052097_1595-all-cells | Human | Prostate | BPH | 1.63e-09 | 2.99e-01 | 0.0972 |
55205 | ZNF532 | 052099_1652-all-cells | Human | Prostate | BPH | 3.84e-13 | 3.83e-01 | 0.1038 |
55205 | ZNF532 | Dong_P1 | Human | Prostate | Tumor | 3.56e-11 | 9.77e-02 | 0.035 |
55205 | ZNF532 | Dong_P3 | Human | Prostate | Tumor | 4.10e-15 | 2.55e-01 | 0.0278 |
55205 | ZNF532 | Dong_P4 | Human | Prostate | Tumor | 3.37e-02 | 1.19e-01 | 0.0292 |
55205 | ZNF532 | GSM5353216_PA_PB1A_Pool_1_3_S50_L002 | Human | Prostate | Tumor | 8.20e-03 | 6.45e-01 | 0.159 |
55205 | ZNF532 | GSM5353221_PA_PB2A_Pool_1_3_S25_L001 | Human | Prostate | Tumor | 1.58e-08 | 5.78e-01 | 0.1633 |
55205 | ZNF532 | GSM5353222_PA_PB2B_Pool_1_3_S52_L002 | Human | Prostate | Tumor | 8.96e-09 | 5.35e-01 | 0.1608 |
55205 | ZNF532 | GSM5353223_PA_PB2B_Pool_2_S26_L001 | Human | Prostate | Tumor | 5.65e-10 | 6.66e-01 | 0.1604 |
55205 | ZNF532 | GSM5353224_PA_PR5186_Pool_1_2_3_S27_L001 | Human | Prostate | Tumor | 1.25e-08 | 5.79e-01 | 0.1621 |
55205 | ZNF532 | GSM5353225_PA_PR5196-1_Pool_1_2_3_S53_L002 | Human | Prostate | Tumor | 1.27e-04 | 6.32e-01 | 0.1619 |
55205 | ZNF532 | GSM5353226_PA_PR5196-2_Pool_1_2_3_S54_L002 | Human | Prostate | Tumor | 2.18e-02 | 5.61e-01 | 0.159 |
55205 | ZNF532 | GSM5353248_PA_PR5269_4_S28_L002 | Human | Prostate | Tumor | 1.47e-03 | 6.35e-01 | 0.1541 |
55205 | ZNF532 | P10_cSCC | Human | Skin | cSCC | 4.80e-13 | 5.43e-01 | 0.1017 |
55205 | ZNF532 | male-WTA | Human | Thyroid | PTC | 3.76e-33 | 2.72e-01 | 0.1037 |
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Transcriptomic changes along malignancy continuum. |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
Find out the enriched GO biological processes and KEGG pathways involved in transition from healthy to precancer to cancer |
Figure of enriched GO biological processes. |
Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | |
Colorectum | SER | |
Colorectum | MSS | |
Colorectum | MSI-H | |
Colorectum | FAP |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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Enriched GO biological processes. |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Enriched KEGG pathways. |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
Identification of potential cell-cell interactions between two cell types and their ligand-receptor pairs for different disease states |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
Find out the significant the regulons (TFs) and the target genes of each regulon across cell types for different disease states |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
Annotation of somatic variants for genes involved in malignant transformation |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
ZNF532 | SNV | Missense_Mutation | rs774011067 | c.1285G>A | p.Val429Met | p.V429M | Q9HCE3 | protein_coding | tolerated(0.14) | benign(0.026) | TCGA-A5-A0G2-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | III/IV | Unknown | Unknown | SD |
ZNF532 | SNV | Missense_Mutation | novel | c.2651G>T | p.Ser884Ile | p.S884I | Q9HCE3 | protein_coding | deleterious(0.02) | benign(0.383) | TCGA-A5-A0G2-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | III/IV | Unknown | Unknown | SD |
ZNF532 | SNV | Missense_Mutation | c.107N>G | p.Asp36Gly | p.D36G | Q9HCE3 | protein_coding | deleterious(0) | benign(0.083) | TCGA-A5-A0GB-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
ZNF532 | SNV | Missense_Mutation | novel | c.1934N>T | p.Thr645Met | p.T645M | Q9HCE3 | protein_coding | tolerated(0.45) | possibly_damaging(0.476) | TCGA-A5-A1OF-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
ZNF532 | SNV | Missense_Mutation | c.2665G>A | p.Ala889Thr | p.A889T | Q9HCE3 | protein_coding | tolerated(0.33) | benign(0.007) | TCGA-A5-A2K5-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
ZNF532 | SNV | Missense_Mutation | c.1844N>T | p.Gly615Val | p.G615V | Q9HCE3 | protein_coding | deleterious(0) | probably_damaging(1) | TCGA-AP-A051-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
ZNF532 | SNV | Missense_Mutation | c.2818N>A | p.Asp940Asn | p.D940N | Q9HCE3 | protein_coding | deleterious(0.01) | probably_damaging(0.996) | TCGA-AP-A051-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
ZNF532 | SNV | Missense_Mutation | c.3015N>T | p.Lys1005Asn | p.K1005N | Q9HCE3 | protein_coding | tolerated(0.1) | possibly_damaging(0.617) | TCGA-AP-A056-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD | |
ZNF532 | SNV | Missense_Mutation | c.32N>C | p.Phe11Ser | p.F11S | Q9HCE3 | protein_coding | deleterious(0) | probably_damaging(0.996) | TCGA-AP-A059-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
ZNF532 | SNV | Missense_Mutation | novel | c.2496N>A | p.Asn832Lys | p.N832K | Q9HCE3 | protein_coding | tolerated(0.08) | probably_damaging(0.937) | TCGA-AP-A059-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD |
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Related drugs of malignant transformation related genes |
Identification of chemicals and drugs interact with genes involved in malignant transfromation |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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