GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
GO:004325422 | Liver | HCC | regulation of protein-containing complex assembly | 264/7958 | 428/18723 | 5.47e-16 | 4.39e-14 | 264 |
GO:005125822 | Liver | HCC | protein polymerization | 182/7958 | 297/18723 | 4.17e-11 | 1.58e-09 | 182 |
GO:190290322 | Liver | HCC | regulation of supramolecular fiber organization | 224/7958 | 383/18723 | 1.54e-10 | 5.33e-09 | 224 |
GO:003227122 | Liver | HCC | regulation of protein polymerization | 141/7958 | 233/18723 | 2.00e-08 | 4.72e-07 | 141 |
GO:001631121 | Liver | HCC | dephosphorylation | 230/7958 | 417/18723 | 1.00e-07 | 1.96e-06 | 230 |
GO:007050711 | Liver | HCC | regulation of microtubule cytoskeleton organization | 88/7958 | 148/18723 | 2.28e-05 | 2.41e-04 | 88 |
GO:0046785 | Liver | HCC | microtubule polymerization | 51/7958 | 83/18723 | 3.82e-04 | 2.61e-03 | 51 |
GO:0031109 | Liver | HCC | microtubule polymerization or depolymerization | 68/7958 | 122/18723 | 2.14e-03 | 1.08e-02 | 68 |
GO:0031110 | Liver | HCC | regulation of microtubule polymerization or depolymerization | 51/7958 | 88/18723 | 2.46e-03 | 1.19e-02 | 51 |
GO:00507674 | Liver | HCC | regulation of neurogenesis | 181/7958 | 364/18723 | 3.00e-03 | 1.40e-02 | 181 |
GO:00311132 | Liver | HCC | regulation of microtubule polymerization | 34/7958 | 55/18723 | 3.00e-03 | 1.40e-02 | 34 |
GO:0032886 | Liver | HCC | regulation of microtubule-based process | 123/7958 | 240/18723 | 3.69e-03 | 1.64e-02 | 123 |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
PRUNE1 | SNV | Missense_Mutation | rs751943099 | c.179N>A | p.Arg60His | p.R60H | Q86TP1 | protein_coding | deleterious(0.02) | benign(0.156) | TCGA-A5-A2K5-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD |
PRUNE1 | SNV | Missense_Mutation | | c.1019N>G | p.Leu340Arg | p.L340R | Q86TP1 | protein_coding | tolerated(0.37) | benign(0.011) | TCGA-AX-A05Z-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | III/IV | Chemotherapy | adriamycin | SD |
PRUNE1 | SNV | Missense_Mutation | | c.1356N>T | p.Lys452Asn | p.K452N | Q86TP1 | protein_coding | tolerated_low_confidence(0.21) | benign(0.003) | TCGA-AX-A05Z-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | III/IV | Chemotherapy | adriamycin | SD |
PRUNE1 | SNV | Missense_Mutation | | c.815N>T | p.Ala272Val | p.A272V | Q86TP1 | protein_coding | tolerated(0.16) | benign(0.061) | TCGA-AX-A0J0-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
PRUNE1 | SNV | Missense_Mutation | novel | c.1013C>T | p.Ala338Val | p.A338V | Q86TP1 | protein_coding | deleterious(0.02) | probably_damaging(0.979) | TCGA-AX-A1CE-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unspecific | Paclitaxel | SD |
PRUNE1 | SNV | Missense_Mutation | | c.662C>T | p.Ala221Val | p.A221V | Q86TP1 | protein_coding | deleterious(0) | probably_damaging(1) | TCGA-B5-A11E-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
PRUNE1 | SNV | Missense_Mutation | novel | c.1232N>T | p.Pro411Leu | p.P411L | Q86TP1 | protein_coding | deleterious(0) | probably_damaging(0.999) | TCGA-DF-A2KU-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | Unknown | I/II | Unknown | Unknown | SD |
PRUNE1 | SNV | Missense_Mutation | novel | c.1047G>T | p.Lys349Asn | p.K349N | Q86TP1 | protein_coding | deleterious(0) | probably_damaging(1) | TCGA-EO-A22X-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | III/IV | Unspecific | Carboplatin | Complete Response |
PRUNE1 | SNV | Missense_Mutation | novel | c.191C>T | p.Pro64Leu | p.P64L | Q86TP1 | protein_coding | tolerated(0.08) | benign(0.265) | TCGA-FI-A2D0-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
PRUNE1 | SNV | Missense_Mutation | | c.1295C>T | p.Ala432Val | p.A432V | Q86TP1 | protein_coding | tolerated(0.06) | benign(0.011) | TCGA-FI-A2D0-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |