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Gene: AHDC1 |
Gene summary for AHDC1 |
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Gene information | Species | Human | Gene symbol | AHDC1 | Gene ID | 27245 |
Gene name | AT-hook DNA binding motif containing 1 | |
Gene Alias | MRD25 | |
Cytomap | 1p36.11-p35.3 | |
Gene Type | protein-coding | GO ID | GO:0003674 | UniProtAcc | Q5TGY3 |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
27245 | AHDC1 | CA_HPV_3 | Human | Cervix | CC | 2.20e-04 | 1.33e-01 | 0.0414 |
27245 | AHDC1 | CCI_1 | Human | Cervix | CC | 1.23e-05 | 6.23e-01 | 0.528 |
27245 | AHDC1 | CCI_3 | Human | Cervix | CC | 7.52e-05 | 5.04e-01 | 0.516 |
27245 | AHDC1 | LZE7T | Human | Esophagus | ESCC | 2.53e-06 | 2.65e-01 | 0.0667 |
27245 | AHDC1 | LZE8T | Human | Esophagus | ESCC | 8.02e-04 | 1.88e-01 | 0.067 |
27245 | AHDC1 | LZE22T | Human | Esophagus | ESCC | 2.88e-02 | 1.90e-01 | 0.068 |
27245 | AHDC1 | LZE24T | Human | Esophagus | ESCC | 6.27e-09 | 2.67e-01 | 0.0596 |
27245 | AHDC1 | P2T-E | Human | Esophagus | ESCC | 1.64e-14 | 2.32e-01 | 0.1177 |
27245 | AHDC1 | P4T-E | Human | Esophagus | ESCC | 2.53e-06 | 5.15e-02 | 0.1323 |
27245 | AHDC1 | P5T-E | Human | Esophagus | ESCC | 9.03e-12 | 5.03e-02 | 0.1327 |
27245 | AHDC1 | P8T-E | Human | Esophagus | ESCC | 2.59e-08 | 8.85e-02 | 0.0889 |
27245 | AHDC1 | P9T-E | Human | Esophagus | ESCC | 1.01e-03 | 3.73e-02 | 0.1131 |
27245 | AHDC1 | P10T-E | Human | Esophagus | ESCC | 1.89e-29 | 5.92e-01 | 0.116 |
27245 | AHDC1 | P12T-E | Human | Esophagus | ESCC | 8.26e-18 | 1.29e-01 | 0.1122 |
27245 | AHDC1 | P15T-E | Human | Esophagus | ESCC | 5.28e-14 | 3.16e-01 | 0.1149 |
27245 | AHDC1 | P16T-E | Human | Esophagus | ESCC | 6.49e-11 | 1.31e-01 | 0.1153 |
27245 | AHDC1 | P17T-E | Human | Esophagus | ESCC | 2.94e-02 | 1.81e-01 | 0.1278 |
27245 | AHDC1 | P20T-E | Human | Esophagus | ESCC | 6.91e-10 | 2.29e-01 | 0.1124 |
27245 | AHDC1 | P21T-E | Human | Esophagus | ESCC | 2.25e-17 | 3.41e-01 | 0.1617 |
27245 | AHDC1 | P22T-E | Human | Esophagus | ESCC | 7.03e-10 | 9.72e-04 | 0.1236 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
AHDC1 | SNV | Missense_Mutation | novel | c.1921N>T | p.Ser641Cys | p.S641C | Q5TGY3 | protein_coding | deleterious(0) | possibly_damaging(0.906) | TCGA-D7-A6EY-01 | Stomach | stomach adenocarcinoma | Female | >=65 | III/IV | Unknown | Unknown | PD |
AHDC1 | SNV | Missense_Mutation | novel | c.3349N>G | p.Leu1117Val | p.L1117V | Q5TGY3 | protein_coding | tolerated(0.11) | probably_damaging(0.978) | TCGA-D7-A6EZ-01 | Stomach | stomach adenocarcinoma | Male | >=65 | III/IV | Unknown | Unknown | PD |
AHDC1 | SNV | Missense_Mutation | c.2696N>T | p.Ala899Val | p.A899V | Q5TGY3 | protein_coding | tolerated(0.15) | benign(0.015) | TCGA-F1-6874-01 | Stomach | stomach adenocarcinoma | Male | >=65 | I/II | Unknown | Unknown | SD | |
AHDC1 | SNV | Missense_Mutation | c.2293G>T | p.Gly765Cys | p.G765C | Q5TGY3 | protein_coding | deleterious(0.02) | possibly_damaging(0.823) | TCGA-HU-A4GN-01 | Stomach | stomach adenocarcinoma | Male | <65 | I/II | Chemotherapy | mitomycin | PD | |
AHDC1 | SNV | Missense_Mutation | rs779580540 | c.310G>A | p.Gly104Ser | p.G104S | Q5TGY3 | protein_coding | tolerated_low_confidence(0.96) | benign(0) | TCGA-HU-A4GT-01 | Stomach | stomach adenocarcinoma | Female | >=65 | I/II | Chemotherapy | copolang | SD |
AHDC1 | SNV | Missense_Mutation | rs138355578 | c.3308N>T | p.Ala1103Val | p.A1103V | Q5TGY3 | protein_coding | tolerated(0.1) | benign(0.001) | TCGA-VQ-A8P2-01 | Stomach | stomach adenocarcinoma | Male | >=65 | III/IV | Unspecific | Complete Response | |
AHDC1 | SNV | Missense_Mutation | rs367582615 | c.1459N>T | p.Arg487Trp | p.R487W | Q5TGY3 | protein_coding | deleterious(0) | probably_damaging(0.999) | TCGA-VQ-A8P2-01 | Stomach | stomach adenocarcinoma | Male | >=65 | III/IV | Unspecific | Complete Response |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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