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Gene: ACOX1 |
Gene summary for ACOX1 |
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Gene information | Species | Human | Gene symbol | ACOX1 | Gene ID | 51 |
Gene name | acyl-CoA oxidase 1 | |
Gene Alias | ACOX | |
Cytomap | 17q25.1 | |
Gene Type | protein-coding | GO ID | GO:0000003 | UniProtAcc | Q15067 |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
51 | ACOX1 | HTA11_2487_2000001011 | Human | Colorectum | SER | 1.13e-06 | 6.12e-01 | -0.1808 |
51 | ACOX1 | HTA11_1938_2000001011 | Human | Colorectum | AD | 1.65e-08 | 5.83e-01 | -0.0811 |
51 | ACOX1 | HTA11_78_2000001011 | Human | Colorectum | AD | 3.34e-05 | 5.94e-01 | -0.1088 |
51 | ACOX1 | HTA11_347_2000001011 | Human | Colorectum | AD | 1.13e-30 | 9.53e-01 | -0.1954 |
51 | ACOX1 | HTA11_3361_2000001011 | Human | Colorectum | AD | 6.97e-05 | 6.31e-01 | -0.1207 |
51 | ACOX1 | HTA11_83_2000001011 | Human | Colorectum | SER | 7.99e-05 | 6.83e-01 | -0.1526 |
51 | ACOX1 | HTA11_696_2000001011 | Human | Colorectum | AD | 3.29e-09 | 5.58e-01 | -0.1464 |
51 | ACOX1 | HTA11_866_2000001011 | Human | Colorectum | AD | 2.58e-07 | 5.10e-01 | -0.1001 |
51 | ACOX1 | HTA11_1391_2000001011 | Human | Colorectum | AD | 1.68e-05 | 5.52e-01 | -0.059 |
51 | ACOX1 | HTA11_5212_2000001011 | Human | Colorectum | AD | 1.14e-04 | 6.24e-01 | -0.2061 |
51 | ACOX1 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 3.20e-05 | 4.15e-01 | 0.3859 |
51 | ACOX1 | A015-C-203 | Human | Colorectum | FAP | 1.63e-08 | -1.28e-01 | -0.1294 |
51 | ACOX1 | A001-C-108 | Human | Colorectum | FAP | 1.21e-02 | -9.49e-02 | -0.0272 |
51 | ACOX1 | A002-C-205 | Human | Colorectum | FAP | 7.26e-06 | -1.64e-01 | -0.1236 |
51 | ACOX1 | A015-C-006 | Human | Colorectum | FAP | 4.87e-04 | -2.15e-01 | -0.0994 |
51 | ACOX1 | A002-C-114 | Human | Colorectum | FAP | 1.51e-03 | -7.93e-02 | -0.1561 |
51 | ACOX1 | A015-C-104 | Human | Colorectum | FAP | 2.14e-06 | -1.73e-01 | -0.1899 |
51 | ACOX1 | A001-C-014 | Human | Colorectum | FAP | 2.99e-02 | -1.49e-01 | 0.0135 |
51 | ACOX1 | A002-C-016 | Human | Colorectum | FAP | 1.18e-07 | -1.16e-01 | 0.0521 |
51 | ACOX1 | A015-C-002 | Human | Colorectum | FAP | 3.41e-03 | -2.27e-01 | -0.0763 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
GO:00442423 | Colorectum | CRC | cellular lipid catabolic process | 37/2078 | 214/18723 | 4.16e-03 | 3.40e-02 | 37 |
GO:0006091110 | Esophagus | ESCC | generation of precursor metabolites and energy | 331/8552 | 490/18723 | 3.86e-23 | 8.45e-21 | 331 |
GO:00193958 | Esophagus | ESCC | fatty acid oxidation | 69/8552 | 103/18723 | 9.95e-06 | 9.44e-05 | 69 |
GO:00344407 | Esophagus | ESCC | lipid oxidation | 71/8552 | 108/18723 | 2.00e-05 | 1.74e-04 | 71 |
GO:00090628 | Esophagus | ESCC | fatty acid catabolic process | 66/8552 | 100/18723 | 3.21e-05 | 2.66e-04 | 66 |
GO:00066318 | Esophagus | ESCC | fatty acid metabolic process | 217/8552 | 390/18723 | 4.21e-05 | 3.39e-04 | 217 |
GO:00066358 | Esophagus | ESCC | fatty acid beta-oxidation | 50/8552 | 74/18723 | 1.16e-04 | 8.04e-04 | 50 |
GO:007259318 | Esophagus | ESCC | reactive oxygen species metabolic process | 137/8552 | 239/18723 | 1.82e-04 | 1.16e-03 | 137 |
GO:00723297 | Esophagus | ESCC | monocarboxylic acid catabolic process | 74/8552 | 122/18723 | 6.03e-04 | 3.27e-03 | 74 |
GO:00442427 | Esophagus | ESCC | cellular lipid catabolic process | 121/8552 | 214/18723 | 8.63e-04 | 4.43e-03 | 121 |
GO:00442827 | Esophagus | ESCC | small molecule catabolic process | 201/8552 | 376/18723 | 1.35e-03 | 6.41e-03 | 201 |
GO:000669211 | Esophagus | ESCC | prostanoid metabolic process | 33/8552 | 49/18723 | 1.80e-03 | 8.26e-03 | 33 |
GO:000669311 | Esophagus | ESCC | prostaglandin metabolic process | 33/8552 | 49/18723 | 1.80e-03 | 8.26e-03 | 33 |
GO:00302586 | Esophagus | ESCC | lipid modification | 116/8552 | 212/18723 | 4.90e-03 | 1.89e-02 | 116 |
GO:00160427 | Esophagus | ESCC | lipid catabolic process | 168/8552 | 320/18723 | 7.97e-03 | 2.84e-02 | 168 |
GO:00463953 | Liver | NAFLD | carboxylic acid catabolic process | 73/1882 | 236/18723 | 4.16e-19 | 1.22e-15 | 73 |
GO:00160544 | Liver | NAFLD | organic acid catabolic process | 73/1882 | 240/18723 | 1.20e-18 | 2.34e-15 | 73 |
GO:00442825 | Liver | NAFLD | small molecule catabolic process | 91/1882 | 376/18723 | 8.96e-16 | 1.31e-12 | 91 |
GO:00066316 | Liver | NAFLD | fatty acid metabolic process | 92/1882 | 390/18723 | 3.38e-15 | 3.29e-12 | 92 |
GO:00723295 | Liver | NAFLD | monocarboxylic acid catabolic process | 39/1882 | 122/18723 | 2.40e-11 | 8.77e-09 | 39 |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
hsa01200 | Colorectum | AD | Carbon metabolism | 55/2092 | 115/8465 | 5.53e-08 | 8.42e-07 | 5.37e-07 | 55 |
hsa00640 | Colorectum | AD | Propanoate metabolism | 18/2092 | 32/8465 | 1.33e-04 | 1.11e-03 | 7.08e-04 | 18 |
hsa00071 | Colorectum | AD | Fatty acid degradation | 20/2092 | 43/8465 | 1.50e-03 | 8.69e-03 | 5.54e-03 | 20 |
hsa012001 | Colorectum | AD | Carbon metabolism | 55/2092 | 115/8465 | 5.53e-08 | 8.42e-07 | 5.37e-07 | 55 |
hsa006401 | Colorectum | AD | Propanoate metabolism | 18/2092 | 32/8465 | 1.33e-04 | 1.11e-03 | 7.08e-04 | 18 |
hsa000711 | Colorectum | AD | Fatty acid degradation | 20/2092 | 43/8465 | 1.50e-03 | 8.69e-03 | 5.54e-03 | 20 |
hsa000712 | Colorectum | SER | Fatty acid degradation | 15/1580 | 43/8465 | 8.60e-03 | 4.26e-02 | 3.09e-02 | 15 |
hsa000713 | Colorectum | SER | Fatty acid degradation | 15/1580 | 43/8465 | 8.60e-03 | 4.26e-02 | 3.09e-02 | 15 |
hsa012004 | Colorectum | MSS | Carbon metabolism | 43/1875 | 115/8465 | 1.37e-04 | 1.17e-03 | 7.19e-04 | 43 |
hsa000714 | Colorectum | MSS | Fatty acid degradation | 17/1875 | 43/8465 | 7.50e-03 | 2.86e-02 | 1.75e-02 | 17 |
hsa012005 | Colorectum | MSS | Carbon metabolism | 43/1875 | 115/8465 | 1.37e-04 | 1.17e-03 | 7.19e-04 | 43 |
hsa000715 | Colorectum | MSS | Fatty acid degradation | 17/1875 | 43/8465 | 7.50e-03 | 2.86e-02 | 1.75e-02 | 17 |
hsa012006 | Colorectum | FAP | Carbon metabolism | 38/1404 | 115/8465 | 1.04e-05 | 1.44e-04 | 8.76e-05 | 38 |
hsa006406 | Colorectum | FAP | Propanoate metabolism | 15/1404 | 32/8465 | 6.21e-05 | 6.10e-04 | 3.71e-04 | 15 |
hsa000716 | Colorectum | FAP | Fatty acid degradation | 15/1404 | 43/8465 | 2.73e-03 | 1.23e-02 | 7.50e-03 | 15 |
hsa04024 | Colorectum | FAP | cAMP signaling pathway | 51/1404 | 225/8465 | 1.02e-02 | 3.68e-02 | 2.24e-02 | 51 |
hsa012007 | Colorectum | FAP | Carbon metabolism | 38/1404 | 115/8465 | 1.04e-05 | 1.44e-04 | 8.76e-05 | 38 |
hsa006407 | Colorectum | FAP | Propanoate metabolism | 15/1404 | 32/8465 | 6.21e-05 | 6.10e-04 | 3.71e-04 | 15 |
hsa000717 | Colorectum | FAP | Fatty acid degradation | 15/1404 | 43/8465 | 2.73e-03 | 1.23e-02 | 7.50e-03 | 15 |
hsa040241 | Colorectum | FAP | cAMP signaling pathway | 51/1404 | 225/8465 | 1.02e-02 | 3.68e-02 | 2.24e-02 | 51 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
ACOX1 | SNV | Missense_Mutation | novel | c.88N>C | p.Thr30Pro | p.T30P | Q15067 | protein_coding | deleterious(0.01) | benign(0.168) | TCGA-AR-A1AQ-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Chemotherapy | doxorubicin | SD |
ACOX1 | SNV | Missense_Mutation | c.1693N>C | p.Tyr565His | p.Y565H | Q15067 | protein_coding | tolerated(1) | benign(0.001) | TCGA-BH-A0BZ-01 | Breast | breast invasive carcinoma | Female | <65 | III/IV | Chemotherapy | doxorubicin | CR | |
ACOX1 | SNV | Missense_Mutation | c.781N>G | p.Pro261Ala | p.P261A | Q15067 | protein_coding | tolerated(0.11) | benign(0) | TCGA-BH-A18V-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Unknown | Unknown | SD | |
ACOX1 | SNV | Missense_Mutation | rs752885559 | c.731A>G | p.Asn244Ser | p.N244S | Q15067 | protein_coding | tolerated(0.05) | benign(0.048) | TCGA-D8-A1XK-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Chemotherapy | doxorubicine+cyclophosphamide | SD |
ACOX1 | SNV | Missense_Mutation | rs749413865 | c.414N>C | p.Gln138His | p.Q138H | Q15067 | protein_coding | deleterious(0) | probably_damaging(0.995) | TCGA-E2-A14N-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Chemotherapy | cyclophosphamide | SD |
ACOX1 | insertion | In_Frame_Ins | novel | c.1115_1116insTAGGCAACAAGAATG | p.Ala372_Leu373insArgGlnGlnGluCys | p.A372_L373insRQQEC | Q15067 | protein_coding | TCGA-A2-A0CT-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Chemotherapy | cytoxan | SD | ||
ACOX1 | insertion | In_Frame_Ins | novel | c.1160_1161insAGAAAAAGCAAGGAG | p.Thr387_Gly388insGluLysAlaArgSer | p.T387_G388insEKARS | Q15067 | protein_coding | TCGA-A8-A07J-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Chemotherapy | 5-fluorouracil | CR | ||
ACOX1 | insertion | Frame_Shift_Ins | novel | c.1158_1159insCTTCAAAAAGAAGTGATTC | p.Thr387LeufsTer10 | p.T387Lfs*10 | Q15067 | protein_coding | TCGA-A8-A07J-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Chemotherapy | 5-fluorouracil | CR | ||
ACOX1 | insertion | In_Frame_Ins | novel | c.1126_1127insTTCAAGACCAGCTTGATCAACATGGTGAAACCGTGTCTCTAC | p.Gly376delinsValGlnAspGlnLeuAspGlnHisGlyGluThrValSerLeuArg | p.G376delinsVQDQLDQHGETVSLR | Q15067 | protein_coding | TCGA-AN-A03X-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | ||
ACOX1 | insertion | Frame_Shift_Ins | novel | c.1536_1537insAT | p.Glu513MetfsTer3 | p.E513Mfs*3 | Q15067 | protein_coding | TCGA-AR-A0TY-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Unspecific | Paclitaxel | PD |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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