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Gene: MAIP1 |
Gene summary for MAIP1 |
 Gene summary. |
| Gene information | Species | Human | Gene symbol | MAIP1 | Gene ID | 79568 |
| Gene name | matrix AAA peptidase interacting protein 1 | |
| Gene Alias | C2orf47 | |
| Cytomap | 2q33.1 | |
| Gene Type | protein-coding | GO ID | GO:0006810 | UniProtAcc | A0A024R3U8 |
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Malignant transformation analysis |
| Identification of the aberrant gene expression in precancerous and cancerous lesions by comparing the gene expression of stem-like cells in diseased tissues with normal stem cells |
| Malignant transformation involving gene list. |
| Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
| 79568 | MAIP1 | LZE4T | Human | Esophagus | ESCC | 9.66e-09 | 2.32e-01 | 0.0811 |
| 79568 | MAIP1 | LZE5T | Human | Esophagus | ESCC | 1.57e-03 | 2.22e-01 | 0.0514 |
| 79568 | MAIP1 | LZE7T | Human | Esophagus | ESCC | 1.02e-03 | 2.31e-01 | 0.0667 |
| 79568 | MAIP1 | LZE20T | Human | Esophagus | ESCC | 2.95e-06 | 1.86e-01 | 0.0662 |
| 79568 | MAIP1 | LZE22T | Human | Esophagus | ESCC | 1.57e-02 | 2.52e-01 | 0.068 |
| 79568 | MAIP1 | LZE24T | Human | Esophagus | ESCC | 1.70e-23 | 5.01e-01 | 0.0596 |
| 79568 | MAIP1 | HCC2 | Human | Liver | HCC | 2.08e-08 | 2.07e+00 | 0.5341 |
| 79568 | MAIP1 | S014 | Human | Liver | HCC | 5.13e-20 | 6.68e-01 | 0.2254 |
| 79568 | MAIP1 | S015 | Human | Liver | HCC | 1.64e-26 | 8.20e-01 | 0.2375 |
| 79568 | MAIP1 | S016 | Human | Liver | HCC | 2.57e-31 | 7.25e-01 | 0.2243 |
| 79568 | MAIP1 | S027 | Human | Liver | HCC | 2.41e-09 | 8.06e-01 | 0.2446 |
| 79568 | MAIP1 | S028 | Human | Liver | HCC | 2.55e-24 | 8.70e-01 | 0.2503 |
| 79568 | MAIP1 | S029 | Human | Liver | HCC | 1.06e-32 | 1.07e+00 | 0.2581 |
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| Transcriptomic changes along malignancy continuum. |
| Tissue | Expression Dynamics | Abbreviation |
| Liver |  | HCC: Hepatocellular carcinoma |
| NAFLD: Non-alcoholic fatty liver disease |
| ∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
| Find out the enriched GO biological processes and KEGG pathways involved in transition from healthy to precancer to cancer |
| Figure of enriched GO biological processes. |
| Tissue | Disease Stage | Enriched GO biological Processes |
| Colorectum | AD |  |
| Colorectum | SER |  |
| Colorectum | MSS |  |
| Colorectum | MSI-H |  |
| Colorectum | FAP |  |
| ∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
| Page: 1 2 3 4 5 6 7 8 9 |
| Enriched GO biological processes. |
| GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
| GO:003166917 | Prostate | Tumor | cellular response to nutrient levels | 66/3246 | 215/18723 | 1.00e-06 | 1.94e-05 | 66 |
| GO:200123815 | Prostate | Tumor | positive regulation of extrinsic apoptotic signaling pathway | 23/3246 | 48/18723 | 1.02e-06 | 1.96e-05 | 23 |
| GO:200124415 | Prostate | Tumor | positive regulation of intrinsic apoptotic signaling pathway | 26/3246 | 58/18723 | 1.03e-06 | 1.99e-05 | 26 |
| GO:004328017 | Prostate | Tumor | positive regulation of cysteine-type endopeptidase activity involved in apoptotic process | 45/3246 | 129/18723 | 1.17e-06 | 2.21e-05 | 45 |
| GO:000862515 | Prostate | Tumor | extrinsic apoptotic signaling pathway via death domain receptors | 32/3246 | 82/18723 | 2.65e-06 | 4.44e-05 | 32 |
| GO:003033017 | Prostate | Tumor | DNA damage response, signal transduction by p53 class mediator | 29/3246 | 72/18723 | 3.66e-06 | 5.91e-05 | 29 |
| GO:000926716 | Prostate | Tumor | cellular response to starvation | 50/3246 | 156/18723 | 5.17e-06 | 8.00e-05 | 50 |
| GO:200105617 | Prostate | Tumor | positive regulation of cysteine-type endopeptidase activity | 48/3246 | 148/18723 | 5.51e-06 | 8.48e-05 | 48 |
| GO:007145316 | Prostate | Tumor | cellular response to oxygen levels | 54/3246 | 177/18723 | 1.13e-05 | 1.62e-04 | 54 |
| GO:004259415 | Prostate | Tumor | response to starvation | 58/3246 | 197/18723 | 1.79e-05 | 2.38e-04 | 58 |
| GO:007005918 | Prostate | Tumor | intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress | 25/3246 | 63/18723 | 2.28e-05 | 2.88e-04 | 25 |
| GO:190204114 | Prostate | Tumor | regulation of extrinsic apoptotic signaling pathway via death domain receptors | 21/3246 | 49/18723 | 2.59e-05 | 3.18e-04 | 21 |
| GO:003629416 | Prostate | Tumor | cellular response to decreased oxygen levels | 49/3246 | 161/18723 | 3.02e-05 | 3.62e-04 | 49 |
| GO:000863717 | Prostate | Tumor | apoptotic mitochondrial changes | 36/3246 | 107/18723 | 3.26e-05 | 3.86e-04 | 36 |
| GO:001082116 | Prostate | Tumor | regulation of mitochondrion organization | 44/3246 | 144/18723 | 6.75e-05 | 7.21e-04 | 44 |
| GO:007145614 | Prostate | Tumor | cellular response to hypoxia | 45/3246 | 151/18723 | 1.08e-04 | 1.03e-03 | 45 |
| GO:000600613 | Prostate | Tumor | glucose metabolic process | 55/3246 | 196/18723 | 1.22e-04 | 1.14e-03 | 55 |
| GO:004277012 | Prostate | Tumor | signal transduction in response to DNA damage | 49/3246 | 172/18723 | 1.87e-04 | 1.65e-03 | 49 |
| GO:000183615 | Prostate | Tumor | release of cytochrome c from mitochondria | 22/3246 | 59/18723 | 2.05e-04 | 1.79e-03 | 22 |
| GO:000610912 | Prostate | Tumor | regulation of carbohydrate metabolic process | 50/3246 | 178/18723 | 2.36e-04 | 2.00e-03 | 50 |
| Page: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 |
| Enriched KEGG pathways. |
| Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
| Page: 1 |
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Cell-cell communication analysis |
| Identification of potential cell-cell interactions between two cell types and their ligand-receptor pairs for different disease states |
| Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
| Page: 1 |
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Single-cell gene regulatory network inference analysis |
| Find out the significant the regulons (TFs) and the target genes of each regulon across cell types for different disease states |
| TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
| ∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
| Page: 1 |
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Somatic mutation of malignant transformation related genes |
| Annotation of somatic variants for genes involved in malignant transformation |
| Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
| MAIP1 | SNV | Missense_Mutation | c.742N>T | p.Val248Phe | p.V248F | Q8WWC4 | protein_coding | tolerated(0.08) | benign(0.233) | TCGA-A8-A08S-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Hormone Therapy | anastrozole | SD | |
| MAIP1 | SNV | Missense_Mutation | c.340N>A | p.Gly114Arg | p.G114R | Q8WWC4 | protein_coding | deleterious(0.03) | possibly_damaging(0.905) | TCGA-A8-A09Z-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
| MAIP1 | SNV | Missense_Mutation | novel | c.608N>C | p.Phe203Ser | p.F203S | Q8WWC4 | protein_coding | deleterious(0) | benign(0.091) | TCGA-AC-A3QQ-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
| MAIP1 | SNV | Missense_Mutation | novel | c.781N>A | p.Leu261Ile | p.L261I | Q8WWC4 | protein_coding | tolerated(0.07) | possibly_damaging(0.521) | TCGA-AN-A046-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD |
| MAIP1 | SNV | Missense_Mutation | c.363N>T | p.Trp121Cys | p.W121C | Q8WWC4 | protein_coding | deleterious(0) | probably_damaging(0.971) | TCGA-BH-A0HY-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Hormone Therapy | taxotere | CR | |
| MAIP1 | SNV | Missense_Mutation | c.520G>C | p.Glu174Gln | p.E174Q | Q8WWC4 | protein_coding | deleterious(0) | probably_damaging(0.982) | TCGA-BH-A0W7-01 | Breast | breast invasive carcinoma | Female | <65 | I/II | Chemotherapy | taxotere | CR | |
| MAIP1 | insertion | Frame_Shift_Ins | novel | c.607_608insCTCA | p.Phe203SerfsTer13 | p.F203Sfs*13 | Q8WWC4 | protein_coding | TCGA-A7-A26I-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Chemotherapy | cytoxan | SD | ||
| MAIP1 | insertion | Frame_Shift_Ins | novel | c.646_647insTGGC | p.Lys216MetfsTer8 | p.K216Mfs*8 | Q8WWC4 | protein_coding | TCGA-A8-A06X-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | ||
| MAIP1 | insertion | Frame_Shift_Ins | novel | c.647_648insGCCTAGATTTC | p.Gly217ProfsTer12 | p.G217Pfs*12 | Q8WWC4 | protein_coding | TCGA-A8-A06X-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | ||
| MAIP1 | SNV | Missense_Mutation | novel | c.37N>T | p.His13Tyr | p.H13Y | Q8WWC4 | protein_coding | deleterious_low_confidence(0.02) | benign(0.006) | TCGA-AJ-A3EK-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Chemotherapy | carboplatin | CR |
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Related drugs of malignant transformation related genes |
| Identification of chemicals and drugs interact with genes involved in malignant transfromation |
| (DGIdb 4.0) |
| Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
| Page: 1 |
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