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Gene: CAV1 |
Gene summary for CAV1 |
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Gene information | Species | Human | Gene symbol | CAV1 | Gene ID | 857 |
Gene name | caveolin 1 | |
Gene Alias | BSCL3 | |
Cytomap | 7q31.2 | |
Gene Type | protein-coding | GO ID | GO:0000122 | UniProtAcc | A0A024R757 |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
857 | CAV1 | AEH-subject1 | Human | Endometrium | AEH | 2.16e-19 | -4.71e-01 | -0.3059 |
857 | CAV1 | AEH-subject2 | Human | Endometrium | AEH | 1.47e-08 | -3.71e-01 | -0.2525 |
857 | CAV1 | AEH-subject3 | Human | Endometrium | AEH | 3.63e-11 | -4.05e-01 | -0.2576 |
857 | CAV1 | AEH-subject4 | Human | Endometrium | AEH | 9.28e-08 | -4.09e-01 | -0.2657 |
857 | CAV1 | AEH-subject5 | Human | Endometrium | AEH | 4.71e-10 | -4.02e-01 | -0.2953 |
857 | CAV1 | EEC-subject1 | Human | Endometrium | EEC | 1.83e-20 | -5.04e-01 | -0.2682 |
857 | CAV1 | EEC-subject2 | Human | Endometrium | EEC | 1.87e-20 | -4.94e-01 | -0.2607 |
857 | CAV1 | EEC-subject3 | Human | Endometrium | EEC | 3.78e-12 | -2.54e-01 | -0.2525 |
857 | CAV1 | EEC-subject4 | Human | Endometrium | EEC | 1.30e-07 | -3.62e-01 | -0.2571 |
857 | CAV1 | EEC-subject5 | Human | Endometrium | EEC | 4.57e-16 | -4.81e-01 | -0.249 |
857 | CAV1 | GSM5276934 | Human | Endometrium | EEC | 6.49e-09 | 4.43e-01 | -0.0913 |
857 | CAV1 | GSM5276935 | Human | Endometrium | EEC | 1.17e-11 | -4.82e-01 | -0.123 |
857 | CAV1 | GSM5276937 | Human | Endometrium | EEC | 1.54e-46 | 1.05e+00 | -0.0897 |
857 | CAV1 | GSM6177620_NYU_UCEC1_lib1_lib1 | Human | Endometrium | EEC | 1.01e-16 | -5.16e-01 | -0.1869 |
857 | CAV1 | GSM6177620_NYU_UCEC1_lib2_lib2 | Human | Endometrium | EEC | 5.84e-16 | -5.24e-01 | -0.1875 |
857 | CAV1 | GSM6177620_NYU_UCEC1_lib3_lib3 | Human | Endometrium | EEC | 4.95e-19 | -5.26e-01 | -0.1883 |
857 | CAV1 | GSM6177621_NYU_UCEC2_lib1_lib1 | Human | Endometrium | EEC | 1.90e-25 | -5.18e-01 | -0.1934 |
857 | CAV1 | GSM6177622_NYU_UCEC3_lib1_lib1 | Human | Endometrium | EEC | 6.93e-28 | -5.13e-01 | -0.1917 |
857 | CAV1 | GSM6177622_NYU_UCEC3_lib2_lib2 | Human | Endometrium | EEC | 2.42e-28 | -5.39e-01 | -0.1916 |
857 | CAV1 | GSM6177623_NYU_UCEC3_Vis | Human | Endometrium | EEC | 9.78e-11 | -4.34e-01 | -0.1269 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
GO:190303916 | Esophagus | ESCC | positive regulation of leukocyte cell-cell adhesion | 128/8552 | 239/18723 | 8.40e-03 | 2.96e-02 | 128 |
GO:00436275 | Esophagus | ESCC | response to estrogen | 45/8552 | 75/18723 | 8.75e-03 | 3.08e-02 | 45 |
GO:00725841 | Esophagus | ESCC | caveolin-mediated endocytosis | 10/8552 | 12/18723 | 8.94e-03 | 3.12e-02 | 10 |
GO:00069073 | Esophagus | ESCC | pinocytosis | 16/8552 | 22/18723 | 9.46e-03 | 3.28e-02 | 16 |
GO:000715918 | Esophagus | ESCC | leukocyte cell-cell adhesion | 192/8552 | 371/18723 | 1.03e-02 | 3.51e-02 | 192 |
GO:01061066 | Esophagus | ESCC | cold-induced thermogenesis | 80/8552 | 144/18723 | 1.07e-02 | 3.65e-02 | 80 |
GO:01201616 | Esophagus | ESCC | regulation of cold-induced thermogenesis | 80/8552 | 144/18723 | 1.07e-02 | 3.65e-02 | 80 |
GO:19000277 | Esophagus | ESCC | regulation of ruffle assembly | 21/8552 | 31/18723 | 1.10e-02 | 3.70e-02 | 21 |
GO:00192168 | Esophagus | ESCC | regulation of lipid metabolic process | 172/8552 | 331/18723 | 1.20e-02 | 4.02e-02 | 172 |
GO:00434074 | Esophagus | ESCC | negative regulation of MAP kinase activity | 36/8552 | 59/18723 | 1.27e-02 | 4.21e-02 | 36 |
GO:00447643 | Esophagus | ESCC | multi-organism cellular process | 11/8552 | 14/18723 | 1.30e-02 | 4.27e-02 | 11 |
GO:190303717 | Esophagus | ESCC | regulation of leukocyte cell-cell adhesion | 174/8552 | 336/18723 | 1.36e-02 | 4.43e-02 | 174 |
GO:001470615 | Esophagus | ESCC | striated muscle tissue development | 197/8552 | 384/18723 | 1.46e-02 | 4.74e-02 | 197 |
GO:0046426 | Esophagus | ESCC | negative regulation of receptor signaling pathway via JAK-STAT | 19/8552 | 28/18723 | 1.49e-02 | 4.84e-02 | 19 |
GO:190188810 | Esophagus | ESCC | regulation of cell junction assembly | 109/8552 | 204/18723 | 1.53e-02 | 4.96e-02 | 109 |
GO:00331383 | Esophagus | ESCC | positive regulation of peptidyl-serine phosphorylation | 61/8552 | 108/18723 | 1.54e-02 | 4.96e-02 | 61 |
GO:00447665 | Esophagus | ESCC | multi-organism transport | 15/8552 | 21/18723 | 1.54e-02 | 4.96e-02 | 15 |
GO:19025795 | Esophagus | ESCC | multi-organism localization | 15/8552 | 21/18723 | 1.54e-02 | 4.96e-02 | 15 |
GO:001603212 | Liver | Cirrhotic | viral process | 203/4634 | 415/18723 | 5.40e-27 | 3.76e-24 | 203 |
GO:001049812 | Liver | Cirrhotic | proteasomal protein catabolic process | 216/4634 | 490/18723 | 2.52e-21 | 9.29e-19 | 216 |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
hsa0502020 | Endometrium | AEH | Prion disease | 110/1197 | 273/8465 | 2.39e-27 | 2.44e-25 | 1.78e-25 | 110 |
hsa0510026 | Endometrium | AEH | Bacterial invasion of epithelial cells | 32/1197 | 77/8465 | 3.28e-09 | 5.91e-08 | 4.33e-08 | 32 |
hsa0541625 | Endometrium | AEH | Viral myocarditis | 27/1197 | 60/8465 | 6.98e-09 | 1.13e-07 | 8.30e-08 | 27 |
hsa0451015 | Endometrium | AEH | Focal adhesion | 58/1197 | 203/8465 | 4.99e-08 | 7.37e-07 | 5.39e-07 | 58 |
hsa0541826 | Endometrium | AEH | Fluid shear stress and atherosclerosis | 43/1197 | 139/8465 | 2.47e-07 | 3.49e-06 | 2.55e-06 | 43 |
hsa0520518 | Endometrium | AEH | Proteoglycans in cancer | 53/1197 | 205/8465 | 5.43e-06 | 6.53e-05 | 4.78e-05 | 53 |
hsa0414420 | Endometrium | AEH | Endocytosis | 56/1197 | 251/8465 | 2.58e-04 | 2.15e-03 | 1.57e-03 | 56 |
hsa05020110 | Endometrium | AEH | Prion disease | 110/1197 | 273/8465 | 2.39e-27 | 2.44e-25 | 1.78e-25 | 110 |
hsa05100111 | Endometrium | AEH | Bacterial invasion of epithelial cells | 32/1197 | 77/8465 | 3.28e-09 | 5.91e-08 | 4.33e-08 | 32 |
hsa05416111 | Endometrium | AEH | Viral myocarditis | 27/1197 | 60/8465 | 6.98e-09 | 1.13e-07 | 8.30e-08 | 27 |
hsa0451016 | Endometrium | AEH | Focal adhesion | 58/1197 | 203/8465 | 4.99e-08 | 7.37e-07 | 5.39e-07 | 58 |
hsa05418112 | Endometrium | AEH | Fluid shear stress and atherosclerosis | 43/1197 | 139/8465 | 2.47e-07 | 3.49e-06 | 2.55e-06 | 43 |
hsa0520519 | Endometrium | AEH | Proteoglycans in cancer | 53/1197 | 205/8465 | 5.43e-06 | 6.53e-05 | 4.78e-05 | 53 |
hsa04144110 | Endometrium | AEH | Endocytosis | 56/1197 | 251/8465 | 2.58e-04 | 2.15e-03 | 1.57e-03 | 56 |
hsa0502025 | Endometrium | EEC | Prion disease | 111/1237 | 273/8465 | 1.01e-26 | 8.27e-25 | 6.16e-25 | 111 |
hsa0541626 | Endometrium | EEC | Viral myocarditis | 28/1237 | 60/8465 | 2.81e-09 | 5.77e-08 | 4.30e-08 | 28 |
hsa0541827 | Endometrium | EEC | Fluid shear stress and atherosclerosis | 45/1237 | 139/8465 | 7.76e-08 | 1.22e-06 | 9.07e-07 | 45 |
hsa0510027 | Endometrium | EEC | Bacterial invasion of epithelial cells | 30/1237 | 77/8465 | 1.26e-07 | 1.88e-06 | 1.40e-06 | 30 |
hsa0451024 | Endometrium | EEC | Focal adhesion | 58/1237 | 203/8465 | 1.61e-07 | 2.30e-06 | 1.71e-06 | 58 |
hsa0520524 | Endometrium | EEC | Proteoglycans in cancer | 52/1237 | 205/8465 | 3.01e-05 | 3.19e-04 | 2.38e-04 | 52 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
CAV1 | SNV | Missense_Mutation | c.62A>T | p.Gln21Leu | p.Q21L | Q03135 | protein_coding | deleterious_low_confidence(0.01) | benign(0.054) | TCGA-A8-A09Z-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
CAV1 | SNV | Missense_Mutation | c.32N>C | p.Gly11Ala | p.G11A | Q03135 | protein_coding | tolerated_low_confidence(0.07) | benign(0.005) | TCGA-AC-A23H-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Unknown | Unknown | PD | |
CAV1 | SNV | Missense_Mutation | c.529N>C | p.Glu177Gln | p.E177Q | Q03135 | protein_coding | deleterious(0.01) | possibly_damaging(0.588) | TCGA-C8-A1HM-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Chemotherapy | doxorubicin | CR | |
CAV1 | SNV | Missense_Mutation | novel | c.386N>A | p.Ala129Glu | p.A129E | Q03135 | protein_coding | tolerated(0.05) | possibly_damaging(0.506) | TCGA-E9-A2JS-01 | Breast | breast invasive carcinoma | Female | >=65 | I/II | Chemotherapy | cyclophosphamide | PD |
CAV1 | SNV | Missense_Mutation | novel | c.418N>A | p.Glu140Lys | p.E140K | Q03135 | protein_coding | tolerated(0.2) | benign(0.005) | TCGA-EA-A3HU-01 | Cervix | cervical & endocervical cancer | Female | <65 | I/II | Unknown | Unknown | SD |
CAV1 | SNV | Missense_Mutation | c.286N>G | p.Lys96Glu | p.K96E | Q03135 | protein_coding | deleterious(0) | probably_damaging(0.993) | TCGA-CK-5916-01 | Colorectum | colon adenocarcinoma | Female | >=65 | I/II | Unknown | Unknown | PD | |
CAV1 | SNV | Missense_Mutation | novel | c.517A>G | p.Asn173Asp | p.N173D | Q03135 | protein_coding | tolerated(0.32) | benign(0.003) | TCGA-A5-A1OF-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
CAV1 | SNV | Missense_Mutation | novel | c.505A>T | p.Asn169Tyr | p.N169Y | Q03135 | protein_coding | deleterious(0.04) | possibly_damaging(0.467) | TCGA-AJ-A23O-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD |
CAV1 | SNV | Missense_Mutation | novel | c.190N>A | p.Val64Ile | p.V64I | Q03135 | protein_coding | tolerated(0.17) | possibly_damaging(0.456) | TCGA-AP-A0LM-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | III/IV | Chemotherapy | cisplatin | SD |
CAV1 | SNV | Missense_Mutation | rs143730366 | c.436C>T | p.Arg146Cys | p.R146C | Q03135 | protein_coding | deleterious(0.01) | probably_damaging(0.978) | TCGA-B5-A11E-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
857 | CAV1 | TRANSPORTER, KINASE | ETHANOL | ALCOHOL | 15845868 | |
857 | CAV1 | TRANSPORTER, KINASE | TESTOSTERONE | TESTOSTERONE | 11389065 |
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