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Gene: LINC00467 |
Gene summary for LINC00467 |
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Gene information | Species | Human | Gene symbol | LINC00467 | Gene ID | 84791 |
Gene name | long intergenic non-protein coding RNA 467 | |
Gene Alias | C1orf97 | |
Cytomap | 1q32.3 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
84791 | LINC00467 | LZE7T | Human | Esophagus | ESCC | 8.38e-08 | 4.89e-01 | 0.0667 |
84791 | LINC00467 | LZE8T | Human | Esophagus | ESCC | 5.36e-06 | 1.79e-01 | 0.067 |
84791 | LINC00467 | LZE20T | Human | Esophagus | ESCC | 2.77e-04 | 1.76e-01 | 0.0662 |
84791 | LINC00467 | LZE22T | Human | Esophagus | ESCC | 4.09e-06 | 4.33e-01 | 0.068 |
84791 | LINC00467 | LZE24T | Human | Esophagus | ESCC | 4.93e-06 | 2.91e-01 | 0.0596 |
84791 | LINC00467 | P1T-E | Human | Esophagus | ESCC | 1.36e-06 | 3.99e-01 | 0.0875 |
84791 | LINC00467 | P2T-E | Human | Esophagus | ESCC | 2.40e-21 | 4.45e-01 | 0.1177 |
84791 | LINC00467 | P4T-E | Human | Esophagus | ESCC | 1.15e-22 | 5.58e-01 | 0.1323 |
84791 | LINC00467 | P5T-E | Human | Esophagus | ESCC | 1.50e-04 | 8.13e-02 | 0.1327 |
84791 | LINC00467 | P8T-E | Human | Esophagus | ESCC | 3.17e-16 | 2.75e-01 | 0.0889 |
84791 | LINC00467 | P9T-E | Human | Esophagus | ESCC | 8.43e-13 | 3.41e-01 | 0.1131 |
84791 | LINC00467 | P10T-E | Human | Esophagus | ESCC | 2.64e-13 | 2.86e-01 | 0.116 |
84791 | LINC00467 | P11T-E | Human | Esophagus | ESCC | 2.73e-03 | 1.60e-01 | 0.1426 |
84791 | LINC00467 | P12T-E | Human | Esophagus | ESCC | 2.54e-02 | 8.69e-02 | 0.1122 |
84791 | LINC00467 | P15T-E | Human | Esophagus | ESCC | 1.30e-08 | 1.54e-01 | 0.1149 |
84791 | LINC00467 | P16T-E | Human | Esophagus | ESCC | 4.83e-29 | 5.38e-01 | 0.1153 |
84791 | LINC00467 | P19T-E | Human | Esophagus | ESCC | 2.10e-03 | 4.31e-01 | 0.1662 |
84791 | LINC00467 | P20T-E | Human | Esophagus | ESCC | 2.72e-11 | 3.31e-01 | 0.1124 |
84791 | LINC00467 | P21T-E | Human | Esophagus | ESCC | 3.98e-24 | 4.17e-01 | 0.1617 |
84791 | LINC00467 | P22T-E | Human | Esophagus | ESCC | 5.85e-22 | 3.29e-01 | 0.1236 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Esophagus | ESCC | ![]() |
Skin | AK | ![]() |
Skin | SCCIS | ![]() |
Skin | cSCC | ![]() |
Thyroid | HT | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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