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Gene: CCDC144NL-AS1 |
Gene summary for CCDC144NL-AS1 |
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Gene information | Species | Human | Gene symbol | CCDC144NL-AS1 | Gene ID | 440416 |
Gene name | CCDC144NL antisense RNA 1 | |
Gene Alias | CCDC144NL-AS1 | |
Cytomap | 17p11.2 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
440416 | CCDC144NL-AS1 | LZE8T | Human | Esophagus | ESCC | 5.32e-14 | 3.47e-01 | 0.067 |
440416 | CCDC144NL-AS1 | LZE20T | Human | Esophagus | ESCC | 1.20e-05 | 1.86e-01 | 0.0662 |
440416 | CCDC144NL-AS1 | LZE24T | Human | Esophagus | ESCC | 7.65e-05 | 1.57e-01 | 0.0596 |
440416 | CCDC144NL-AS1 | P1T-E | Human | Esophagus | ESCC | 2.44e-06 | 5.25e-01 | 0.0875 |
440416 | CCDC144NL-AS1 | P2T-E | Human | Esophagus | ESCC | 3.22e-45 | 8.16e-01 | 0.1177 |
440416 | CCDC144NL-AS1 | P4T-E | Human | Esophagus | ESCC | 2.45e-12 | 3.10e-01 | 0.1323 |
440416 | CCDC144NL-AS1 | P5T-E | Human | Esophagus | ESCC | 3.52e-19 | 2.97e-01 | 0.1327 |
440416 | CCDC144NL-AS1 | P8T-E | Human | Esophagus | ESCC | 9.02e-11 | 2.83e-01 | 0.0889 |
440416 | CCDC144NL-AS1 | P10T-E | Human | Esophagus | ESCC | 1.85e-18 | 3.87e-01 | 0.116 |
440416 | CCDC144NL-AS1 | P12T-E | Human | Esophagus | ESCC | 1.43e-42 | 7.60e-01 | 0.1122 |
440416 | CCDC144NL-AS1 | P20T-E | Human | Esophagus | ESCC | 1.05e-48 | 1.03e+00 | 0.1124 |
440416 | CCDC144NL-AS1 | P23T-E | Human | Esophagus | ESCC | 3.76e-27 | 6.20e-01 | 0.108 |
440416 | CCDC144NL-AS1 | P26T-E | Human | Esophagus | ESCC | 1.57e-53 | 8.07e-01 | 0.1276 |
440416 | CCDC144NL-AS1 | P27T-E | Human | Esophagus | ESCC | 1.62e-13 | 2.57e-01 | 0.1055 |
440416 | CCDC144NL-AS1 | P28T-E | Human | Esophagus | ESCC | 5.12e-47 | 7.94e-01 | 0.1149 |
440416 | CCDC144NL-AS1 | P30T-E | Human | Esophagus | ESCC | 1.02e-02 | 1.75e-01 | 0.137 |
440416 | CCDC144NL-AS1 | P32T-E | Human | Esophagus | ESCC | 7.32e-38 | 7.81e-01 | 0.1666 |
440416 | CCDC144NL-AS1 | P37T-E | Human | Esophagus | ESCC | 4.68e-31 | 6.60e-01 | 0.1371 |
440416 | CCDC144NL-AS1 | P47T-E | Human | Esophagus | ESCC | 9.44e-07 | 1.61e-01 | 0.1067 |
440416 | CCDC144NL-AS1 | P54T-E | Human | Esophagus | ESCC | 2.27e-27 | 5.57e-01 | 0.0975 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Breast | Precancer | ![]() |
Breast | IDC | ![]() |
Breast | DCIS | ![]() |
Cervix | CC | ![]() |
Cervix | HSIL_HPV | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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