![]() |
|||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Gene: SCAMP1-AS1 |
Gene summary for SCAMP1-AS1 |
![]() |
Gene information | Species | Human | Gene symbol | SCAMP1-AS1 | Gene ID | 728769 |
Gene name | SCAMP1 antisense RNA 1 | |
Gene Alias | SCAMP1-AS1 | |
Cytomap | 5q14.1 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
Top |
Malignant transformation analysis |
![]() |
![]() |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
728769 | SCAMP1-AS1 | HTA11_3410_2000001011 | Human | Colorectum | AD | 4.64e-05 | 1.23e-01 | 0.0155 |
728769 | SCAMP1-AS1 | HTA11_2487_2000001011 | Human | Colorectum | SER | 9.60e-04 | 1.64e-01 | -0.1808 |
728769 | SCAMP1-AS1 | HTA11_1938_2000001011 | Human | Colorectum | AD | 1.74e-10 | 3.76e-01 | -0.0811 |
728769 | SCAMP1-AS1 | HTA11_347_2000001011 | Human | Colorectum | AD | 1.78e-04 | 1.57e-01 | -0.1954 |
728769 | SCAMP1-AS1 | HTA11_3361_2000001011 | Human | Colorectum | AD | 1.11e-02 | 1.86e-01 | -0.1207 |
728769 | SCAMP1-AS1 | HTA11_83_2000001011 | Human | Colorectum | SER | 1.34e-07 | 2.81e-01 | -0.1526 |
728769 | SCAMP1-AS1 | HTA11_696_2000001011 | Human | Colorectum | AD | 3.93e-26 | 4.95e-01 | -0.1464 |
728769 | SCAMP1-AS1 | HTA11_866_2000001011 | Human | Colorectum | AD | 2.67e-04 | 2.20e-01 | -0.1001 |
728769 | SCAMP1-AS1 | HTA11_1391_2000001011 | Human | Colorectum | AD | 3.95e-12 | 3.27e-01 | -0.059 |
728769 | SCAMP1-AS1 | HTA11_2992_2000001011 | Human | Colorectum | SER | 2.95e-05 | 3.40e-01 | -0.1706 |
728769 | SCAMP1-AS1 | HTA11_5212_2000001011 | Human | Colorectum | AD | 1.20e-04 | 2.43e-01 | -0.2061 |
728769 | SCAMP1-AS1 | HTA11_5216_2000001011 | Human | Colorectum | SER | 1.97e-06 | 3.73e-01 | -0.1462 |
728769 | SCAMP1-AS1 | HTA11_546_2000001011 | Human | Colorectum | AD | 2.06e-03 | 1.99e-01 | -0.0842 |
728769 | SCAMP1-AS1 | HTA11_7663_2000001011 | Human | Colorectum | SER | 1.13e-02 | 2.93e-01 | 0.0131 |
728769 | SCAMP1-AS1 | HTA11_10711_2000001011 | Human | Colorectum | AD | 2.91e-03 | 1.48e-01 | 0.0338 |
728769 | SCAMP1-AS1 | HTA11_6818_2000001011 | Human | Colorectum | AD | 1.07e-05 | 3.44e-01 | 0.0112 |
728769 | SCAMP1-AS1 | HTA11_6818_2000001021 | Human | Colorectum | AD | 3.03e-10 | 3.82e-01 | 0.0588 |
728769 | SCAMP1-AS1 | HTA11_99999970781_79442 | Human | Colorectum | MSS | 8.01e-05 | 1.61e-01 | 0.294 |
728769 | SCAMP1-AS1 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 5.99e-04 | 1.41e-01 | 0.281 |
728769 | SCAMP1-AS1 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 8.22e-03 | 1.76e-01 | 0.3859 |
Page: 1 |
![]() |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
Top |
Malignant transformation related pathway analysis |
![]() |
![]() |
Tissue | Disease Stage | Enriched GO biological Processes |
Liver | Cyst | ![]() |
Lung | IAC | ![]() |
Lung | AIS | ![]() |
Lung | AAH | ![]() |
Lung | MIAC | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
![]() |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
![]() |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
Top |
Cell-cell communication analysis |
![]() |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
Top |
Single-cell gene regulatory network inference analysis |
![]() |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
Top |
Somatic mutation of malignant transformation related genes |
![]() |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
Top |
Related drugs of malignant transformation related genes |
![]() |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
Page: 1 |