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Gene: LINC00472 |
Gene summary for LINC00472 |
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Gene information | Species | Human | Gene symbol | LINC00472 | Gene ID | 79940 |
Gene name | long intergenic non-protein coding RNA 472 | |
Gene Alias | C6orf155 | |
Cytomap | 6q13 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
79940 | LINC00472 | AEH-subject1 | Human | Endometrium | AEH | 6.10e-28 | 6.89e-01 | -0.3059 |
79940 | LINC00472 | AEH-subject2 | Human | Endometrium | AEH | 4.33e-14 | 4.79e-01 | -0.2525 |
79940 | LINC00472 | AEH-subject3 | Human | Endometrium | AEH | 2.28e-15 | 5.15e-01 | -0.2576 |
79940 | LINC00472 | AEH-subject4 | Human | Endometrium | AEH | 7.73e-08 | 3.61e-01 | -0.2657 |
79940 | LINC00472 | AEH-subject5 | Human | Endometrium | AEH | 2.17e-19 | 7.07e-01 | -0.2953 |
79940 | LINC00472 | EEC-subject1 | Human | Endometrium | EEC | 2.62e-25 | 7.60e-01 | -0.2682 |
79940 | LINC00472 | EEC-subject2 | Human | Endometrium | EEC | 7.13e-14 | 5.08e-01 | -0.2607 |
79940 | LINC00472 | EEC-subject3 | Human | Endometrium | EEC | 3.24e-02 | 2.57e-01 | -0.2525 |
79940 | LINC00472 | EEC-subject5 | Human | Endometrium | EEC | 9.80e-10 | 4.07e-01 | -0.249 |
79940 | LINC00472 | LZE22T | Human | Esophagus | ESCC | 1.57e-02 | 2.22e-01 | 0.068 |
79940 | LINC00472 | P2T-E | Human | Esophagus | ESCC | 8.40e-04 | 1.72e-01 | 0.1177 |
79940 | LINC00472 | P5T-E | Human | Esophagus | ESCC | 1.85e-18 | 4.17e-01 | 0.1327 |
79940 | LINC00472 | P8T-E | Human | Esophagus | ESCC | 3.50e-02 | 1.11e-01 | 0.0889 |
79940 | LINC00472 | P11T-E | Human | Esophagus | ESCC | 6.08e-06 | 2.52e-01 | 0.1426 |
79940 | LINC00472 | P15T-E | Human | Esophagus | ESCC | 2.11e-03 | 1.35e-01 | 0.1149 |
79940 | LINC00472 | P16T-E | Human | Esophagus | ESCC | 9.86e-34 | 5.77e-01 | 0.1153 |
79940 | LINC00472 | P22T-E | Human | Esophagus | ESCC | 8.40e-04 | 1.28e-01 | 0.1236 |
79940 | LINC00472 | P26T-E | Human | Esophagus | ESCC | 5.88e-35 | 7.08e-01 | 0.1276 |
79940 | LINC00472 | P30T-E | Human | Esophagus | ESCC | 2.31e-10 | 4.83e-01 | 0.137 |
79940 | LINC00472 | P32T-E | Human | Esophagus | ESCC | 4.31e-06 | 1.77e-01 | 0.1666 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Liver | Cyst | ![]() |
Lung | IAC | ![]() |
Lung | AIS | ![]() |
Lung | AAH | ![]() |
Lung | MIAC | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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