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Gene: RPSAP58 |
Gene summary for RPSAP58 |
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Gene information | Species | Human | Gene symbol | RPSAP58 | Gene ID | 388524 |
Gene name | ribosomal protein SA pseudogene 58 | |
Gene Alias | RPSA_30_1642 | |
Cytomap | 19p12 | |
Gene Type | protein-coding | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
388524 | RPSAP58 | HCC1 | Human | Liver | HCC | 5.27e-21 | 1.55e+00 | 0.5336 |
388524 | RPSAP58 | HCC2 | Human | Liver | HCC | 8.12e-38 | 2.53e+00 | 0.5341 |
388524 | RPSAP58 | Pt13.b | Human | Liver | HCC | 7.49e-33 | 2.45e-01 | 0.0251 |
388524 | RPSAP58 | Pt14.a | Human | Liver | HCC | 4.95e-31 | 7.21e-01 | 0.0169 |
388524 | RPSAP58 | Pt14.b | Human | Liver | HCC | 8.19e-04 | 1.10e-01 | 0.018 |
388524 | RPSAP58 | Pt14.d | Human | Liver | HCC | 1.20e-17 | 2.90e-01 | 0.0143 |
388524 | RPSAP58 | P1_S1_AK | Human | Skin | AK | 3.45e-19 | -4.64e-01 | -0.3399 |
388524 | RPSAP58 | P2_S3_AK | Human | Skin | AK | 6.46e-20 | -4.64e-01 | -0.3287 |
388524 | RPSAP58 | P2_S4_SCCIS | Human | Skin | SCCIS | 3.45e-19 | -4.64e-01 | -0.3043 |
388524 | RPSAP58 | P3_S6_AK | Human | Skin | AK | 2.79e-20 | -4.64e-01 | -0.3256 |
388524 | RPSAP58 | P4_S8_cSCC | Human | Skin | cSCC | 7.24e-12 | -4.64e-01 | -0.3095 |
388524 | RPSAP58 | P5_S10_cSCC | Human | Skin | cSCC | 2.79e-20 | -4.64e-01 | -0.299 |
388524 | RPSAP58 | P1_cSCC | Human | Skin | cSCC | 1.19e-54 | 2.53e+00 | 0.0292 |
388524 | RPSAP58 | P2_cSCC | Human | Skin | cSCC | 1.43e-78 | 2.08e+00 | -0.024 |
388524 | RPSAP58 | P4_cSCC | Human | Skin | cSCC | 4.40e-27 | 1.03e+00 | -0.00290000000000005 |
388524 | RPSAP58 | P10_cSCC | Human | Skin | cSCC | 1.57e-37 | 1.48e+00 | 0.1017 |
388524 | RPSAP58 | cSCC_p1 | Human | Skin | cSCC | 6.46e-20 | -4.64e-01 | -0.1916 |
388524 | RPSAP58 | cSCC_p10 | Human | Skin | cSCC | 2.79e-20 | -4.64e-01 | -0.2095 |
388524 | RPSAP58 | cSCC_p11 | Human | Skin | cSCC | 2.79e-20 | -4.64e-01 | -0.2102 |
388524 | RPSAP58 | cSCC_p3 | Human | Skin | cSCC | 2.79e-20 | -4.64e-01 | -0.2085 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Stomach | WIM | ![]() |
Stomach | SIM | ![]() |
Liver | NAFLD | ![]() |
Liver | Cirrhotic | ![]() |
Liver | HCC | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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