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Gene: RAB30-AS1 |
Gene summary for RAB30-AS1 |
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Gene information | Species | Human | Gene symbol | RAB30-AS1 | Gene ID | 100506233 |
Gene name | RAB30 divergent transcript | |
Gene Alias | RAB30-AS1 | |
Cytomap | 11q14.1 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100506233 | RAB30-AS1 | P1T-E | Human | Esophagus | ESCC | 6.32e-07 | 1.65e-01 | 0.0875 |
100506233 | RAB30-AS1 | P2T-E | Human | Esophagus | ESCC | 1.18e-08 | 1.25e-01 | 0.1177 |
100506233 | RAB30-AS1 | P4T-E | Human | Esophagus | ESCC | 1.77e-50 | 1.26e+00 | 0.1323 |
100506233 | RAB30-AS1 | P5T-E | Human | Esophagus | ESCC | 2.85e-39 | 7.76e-01 | 0.1327 |
100506233 | RAB30-AS1 | P8T-E | Human | Esophagus | ESCC | 1.74e-04 | 4.41e-02 | 0.0889 |
100506233 | RAB30-AS1 | P9T-E | Human | Esophagus | ESCC | 8.72e-20 | 4.16e-01 | 0.1131 |
100506233 | RAB30-AS1 | P10T-E | Human | Esophagus | ESCC | 8.03e-06 | 5.77e-02 | 0.116 |
100506233 | RAB30-AS1 | P11T-E | Human | Esophagus | ESCC | 7.83e-05 | 1.65e-01 | 0.1426 |
100506233 | RAB30-AS1 | P12T-E | Human | Esophagus | ESCC | 8.79e-12 | 1.55e-01 | 0.1122 |
100506233 | RAB30-AS1 | P15T-E | Human | Esophagus | ESCC | 7.40e-04 | 2.37e-02 | 0.1149 |
100506233 | RAB30-AS1 | P16T-E | Human | Esophagus | ESCC | 4.41e-13 | 2.02e-01 | 0.1153 |
100506233 | RAB30-AS1 | P17T-E | Human | Esophagus | ESCC | 3.29e-11 | 3.58e-01 | 0.1278 |
100506233 | RAB30-AS1 | P19T-E | Human | Esophagus | ESCC | 3.06e-04 | 1.02e+00 | 0.1662 |
100506233 | RAB30-AS1 | P20T-E | Human | Esophagus | ESCC | 1.80e-15 | 2.62e-01 | 0.1124 |
100506233 | RAB30-AS1 | P21T-E | Human | Esophagus | ESCC | 5.85e-29 | 4.93e-01 | 0.1617 |
100506233 | RAB30-AS1 | P22T-E | Human | Esophagus | ESCC | 1.61e-11 | 1.40e-01 | 0.1236 |
100506233 | RAB30-AS1 | P23T-E | Human | Esophagus | ESCC | 3.48e-19 | 2.53e-01 | 0.108 |
100506233 | RAB30-AS1 | P24T-E | Human | Esophagus | ESCC | 5.92e-11 | 6.88e-02 | 0.1287 |
100506233 | RAB30-AS1 | P26T-E | Human | Esophagus | ESCC | 2.52e-15 | 2.25e-01 | 0.1276 |
100506233 | RAB30-AS1 | P27T-E | Human | Esophagus | ESCC | 3.35e-09 | 1.35e-01 | 0.1055 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | CRC | ![]() |
Stomach | GC | ![]() |
Stomach | CAG with IM | ![]() |
Stomach | CSG | ![]() |
Stomach | CAG | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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