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Gene: LINC00923 |
Gene summary for LINC00923 |
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Gene information | Species | Human | Gene symbol | LINC00923 | Gene ID | 91948 |
Gene name | long intergenic non-protein coding RNA 923 | |
Gene Alias | LINC00923 | |
Cytomap | 15q26.2 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
91948 | LINC00923 | HTA11_3410_2000001011 | Human | Colorectum | AD | 5.89e-10 | -5.04e-01 | 0.0155 |
91948 | LINC00923 | HTA11_2487_2000001011 | Human | Colorectum | SER | 1.21e-02 | -4.31e-01 | -0.1808 |
91948 | LINC00923 | HTA11_78_2000001011 | Human | Colorectum | AD | 1.25e-07 | -5.22e-01 | -0.1088 |
91948 | LINC00923 | HTA11_3361_2000001011 | Human | Colorectum | AD | 3.67e-02 | -4.61e-01 | -0.1207 |
91948 | LINC00923 | HTA11_866_2000001011 | Human | Colorectum | AD | 3.27e-14 | -5.07e-01 | -0.1001 |
91948 | LINC00923 | HTA11_1391_2000001011 | Human | Colorectum | AD | 8.49e-07 | -4.84e-01 | -0.059 |
91948 | LINC00923 | HTA11_866_3004761011 | Human | Colorectum | AD | 2.19e-11 | -5.35e-01 | 0.096 |
91948 | LINC00923 | HTA11_10711_2000001011 | Human | Colorectum | AD | 3.07e-04 | -4.84e-01 | 0.0338 |
91948 | LINC00923 | HTA11_7696_3000711011 | Human | Colorectum | AD | 2.62e-05 | -1.93e-01 | 0.0674 |
91948 | LINC00923 | HTA11_6818_2000001021 | Human | Colorectum | AD | 2.20e-04 | -5.34e-01 | 0.0588 |
91948 | LINC00923 | HTA11_99999970781_79442 | Human | Colorectum | MSS | 1.22e-06 | -2.32e-01 | 0.294 |
91948 | LINC00923 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 2.88e-03 | -4.85e-01 | 0.281 |
91948 | LINC00923 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 1.08e-16 | -5.33e-01 | 0.3859 |
91948 | LINC00923 | HTA11_99999974143_84620 | Human | Colorectum | MSS | 1.18e-20 | -5.39e-01 | 0.3005 |
91948 | LINC00923 | A002-C-010 | Human | Colorectum | FAP | 1.06e-22 | -5.42e-01 | 0.242 |
91948 | LINC00923 | A015-C-203 | Human | Colorectum | FAP | 1.01e-07 | -2.87e-01 | -0.1294 |
91948 | LINC00923 | A014-C-040 | Human | Colorectum | FAP | 5.09e-04 | -5.48e-01 | -0.1184 |
91948 | LINC00923 | A002-C-201 | Human | Colorectum | FAP | 1.19e-14 | -5.26e-01 | 0.0324 |
91948 | LINC00923 | A002-C-203 | Human | Colorectum | FAP | 2.05e-21 | -5.31e-01 | 0.2786 |
91948 | LINC00923 | A001-C-108 | Human | Colorectum | FAP | 1.73e-02 | -1.09e-01 | -0.0272 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | CRC | ![]() |
Stomach | GC | ![]() |
Stomach | CAG with IM | ![]() |
Stomach | CSG | ![]() |
Stomach | CAG | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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