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Gene: FGD5-AS1 |
Gene summary for FGD5-AS1 |
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Gene information | Species | Human | Gene symbol | FGD5-AS1 | Gene ID | 100505641 |
Gene name | FGD5 antisense RNA 1 | |
Gene Alias | FGD5-AS1 | |
Cytomap | 3p25.1 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100505641 | FGD5-AS1 | HTA11_2487_2000001011 | Human | Colorectum | SER | 3.01e-02 | 2.98e-01 | -0.1808 |
100505641 | FGD5-AS1 | HTA11_1938_2000001011 | Human | Colorectum | AD | 4.51e-02 | 3.74e-01 | -0.0811 |
100505641 | FGD5-AS1 | HTA11_78_2000001011 | Human | Colorectum | AD | 1.13e-08 | 5.66e-01 | -0.1088 |
100505641 | FGD5-AS1 | HTA11_347_2000001011 | Human | Colorectum | AD | 4.51e-20 | 6.28e-01 | -0.1954 |
100505641 | FGD5-AS1 | HTA11_411_2000001011 | Human | Colorectum | SER | 3.80e-03 | 6.22e-01 | -0.2602 |
100505641 | FGD5-AS1 | HTA11_696_2000001011 | Human | Colorectum | AD | 3.32e-06 | 2.61e-01 | -0.1464 |
100505641 | FGD5-AS1 | HTA11_866_2000001011 | Human | Colorectum | AD | 3.25e-07 | 2.80e-01 | -0.1001 |
100505641 | FGD5-AS1 | HTA11_1391_2000001011 | Human | Colorectum | AD | 6.51e-06 | 4.27e-01 | -0.059 |
100505641 | FGD5-AS1 | HTA11_7696_3000711011 | Human | Colorectum | AD | 1.57e-03 | 1.62e-01 | 0.0674 |
100505641 | FGD5-AS1 | HTA11_99999970781_79442 | Human | Colorectum | MSS | 6.03e-04 | 2.19e-01 | 0.294 |
100505641 | FGD5-AS1 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 2.35e-04 | 3.78e-01 | 0.281 |
100505641 | FGD5-AS1 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 3.33e-08 | 3.64e-01 | 0.3859 |
100505641 | FGD5-AS1 | LZE7T | Human | Esophagus | ESCC | 5.18e-06 | 9.65e-02 | 0.0667 |
100505641 | FGD5-AS1 | LZE20T | Human | Esophagus | ESCC | 1.12e-06 | 5.28e-02 | 0.0662 |
100505641 | FGD5-AS1 | LZE24T | Human | Esophagus | ESCC | 3.18e-15 | 2.45e-01 | 0.0596 |
100505641 | FGD5-AS1 | LZE6T | Human | Esophagus | ESCC | 1.23e-04 | 1.38e-01 | 0.0845 |
100505641 | FGD5-AS1 | P1T-E | Human | Esophagus | ESCC | 7.98e-06 | 2.11e-01 | 0.0875 |
100505641 | FGD5-AS1 | P2T-E | Human | Esophagus | ESCC | 1.96e-25 | 3.92e-01 | 0.1177 |
100505641 | FGD5-AS1 | P4T-E | Human | Esophagus | ESCC | 1.49e-19 | 4.32e-01 | 0.1323 |
100505641 | FGD5-AS1 | P5T-E | Human | Esophagus | ESCC | 1.76e-21 | 4.41e-01 | 0.1327 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | CRC | ![]() |
Stomach | GC | ![]() |
Stomach | CAG with IM | ![]() |
Stomach | CSG | ![]() |
Stomach | CAG | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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