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Gene: SNHG7 |
Gene summary for SNHG7 |
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Gene information | Species | Human | Gene symbol | SNHG7 | Gene ID | 84973 |
Gene name | small nucleolar RNA host gene 7 | |
Gene Alias | NCRNA00061 | |
Cytomap | 9q34.3 | |
Gene Type | ncRNA | GO ID | GO:0006139 | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
84973 | SNHG7 | AEH-subject2 | Human | Endometrium | AEH | 1.88e-05 | -3.11e-01 | -0.2525 |
84973 | SNHG7 | AEH-subject3 | Human | Endometrium | AEH | 3.81e-04 | -1.41e-01 | -0.2576 |
84973 | SNHG7 | AEH-subject4 | Human | Endometrium | AEH | 3.42e-08 | -3.90e-01 | -0.2657 |
84973 | SNHG7 | EEC-subject1 | Human | Endometrium | EEC | 4.30e-05 | -1.57e-01 | -0.2682 |
84973 | SNHG7 | EEC-subject2 | Human | Endometrium | EEC | 2.85e-05 | -2.62e-01 | -0.2607 |
84973 | SNHG7 | EEC-subject3 | Human | Endometrium | EEC | 7.62e-33 | -3.70e-01 | -0.2525 |
84973 | SNHG7 | EEC-subject4 | Human | Endometrium | EEC | 3.48e-08 | 1.24e-01 | -0.2571 |
84973 | SNHG7 | EEC-subject5 | Human | Endometrium | EEC | 1.58e-04 | -2.99e-01 | -0.249 |
84973 | SNHG7 | GSM5276934 | Human | Endometrium | EEC | 1.45e-02 | -1.21e-01 | -0.0913 |
84973 | SNHG7 | GSM6177620_NYU_UCEC1_lib1_lib1 | Human | Endometrium | EEC | 1.95e-36 | -6.83e-01 | -0.1869 |
84973 | SNHG7 | GSM6177620_NYU_UCEC1_lib2_lib2 | Human | Endometrium | EEC | 1.10e-32 | -6.83e-01 | -0.1875 |
84973 | SNHG7 | GSM6177620_NYU_UCEC1_lib3_lib3 | Human | Endometrium | EEC | 1.22e-37 | -6.83e-01 | -0.1883 |
84973 | SNHG7 | GSM6177621_NYU_UCEC2_lib1_lib1 | Human | Endometrium | EEC | 7.22e-51 | -6.83e-01 | -0.1934 |
84973 | SNHG7 | GSM6177622_NYU_UCEC3_lib1_lib1 | Human | Endometrium | EEC | 1.81e-49 | -6.83e-01 | -0.1917 |
84973 | SNHG7 | GSM6177622_NYU_UCEC3_lib2_lib2 | Human | Endometrium | EEC | 6.57e-48 | -6.83e-01 | -0.1916 |
84973 | SNHG7 | GSM6177623_NYU_UCEC3_Vis | Human | Endometrium | EEC | 3.00e-09 | -3.60e-01 | -0.1269 |
84973 | SNHG7 | LZE4T | Human | Esophagus | ESCC | 3.97e-10 | 4.87e-01 | 0.0811 |
84973 | SNHG7 | LZE20T | Human | Esophagus | ESCC | 1.24e-12 | 8.60e-01 | 0.0662 |
84973 | SNHG7 | LZE22T | Human | Esophagus | ESCC | 3.52e-02 | 4.37e-01 | 0.068 |
84973 | SNHG7 | LZE24T | Human | Esophagus | ESCC | 1.40e-27 | 1.31e+00 | 0.0596 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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