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Gene: BUD23 |
Gene summary for BUD23 |
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Gene information | Species | Human | Gene symbol | BUD23 | Gene ID | 114049 |
Gene name | BUD23 rRNA methyltransferase and ribosome maturation factor | |
Gene Alias | HASJ4442 | |
Cytomap | 7q11.23 | |
Gene Type | protein-coding | GO ID | GO:0000154 | UniProtAcc | O43709 |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
114049 | BUD23 | Pat10-B | Human | Stomach | GC | 2.54e-05 | 2.75e-01 | 0.084 |
114049 | BUD23 | Pat11-B | Human | Stomach | GC | 3.42e-24 | 5.71e-01 | -0.182 |
114049 | BUD23 | Pat12-B | Human | Stomach | GC | 7.19e-21 | 3.72e-01 | 0.0325 |
114049 | BUD23 | Pat13-B | Human | Stomach | GC | 1.68e-18 | 4.35e-01 | 0.0555 |
114049 | BUD23 | Pat15-B | Human | Stomach | GC | 5.70e-17 | 3.79e-01 | -0.0778 |
114049 | BUD23 | Pat16-B | Human | Stomach | GC | 4.50e-27 | 5.09e-01 | 0.1918 |
114049 | BUD23 | Pat17-B | Human | Stomach | GC | 3.98e-11 | 3.12e-01 | 0.3109 |
114049 | BUD23 | Pat18-B | Human | Stomach | GC | 1.38e-22 | 4.31e-01 | -0.0432 |
114049 | BUD23 | Pat19-B | Human | Stomach | GC | 3.88e-17 | 4.52e-01 | 0.0826 |
114049 | BUD23 | Pat22-B | Human | Stomach | GC | 7.99e-35 | 5.70e-01 | -0.1042 |
114049 | BUD23 | Pat24-B | Human | Stomach | GC | 2.54e-14 | 3.65e-01 | -0.1184 |
114049 | BUD23 | Pat25-A | Human | Stomach | CAG with IM | 4.07e-37 | 5.16e-01 | -0.1648 |
114049 | BUD23 | Pat26-A | Human | Stomach | CSG | 4.40e-40 | 5.56e-01 | -0.2402 |
114049 | BUD23 | Pat28-A | Human | Stomach | CSG | 8.55e-25 | 5.34e-01 | -0.2594 |
114049 | BUD23 | Pat29-A | Human | Stomach | CAG with IM | 1.48e-12 | 4.19e-01 | -0.2769 |
114049 | BUD23 | male-WTA | Human | Thyroid | PTC | 2.95e-31 | 4.06e-01 | 0.1037 |
114049 | BUD23 | female-WTA | Human | Thyroid | PTC | 4.92e-03 | 3.11e-01 | 0.0726 |
114049 | BUD23 | nodule-WTA | Human | Thyroid | goiters | 5.75e-07 | 3.18e-01 | 0.0534 |
114049 | BUD23 | PTC01 | Human | Thyroid | PTC | 1.17e-31 | 6.61e-01 | 0.1899 |
114049 | BUD23 | PTC03 | Human | Thyroid | PTC | 2.01e-10 | 4.27e-01 | 0.1784 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
GO:002261316 | Endometrium | AEH | ribonucleoprotein complex biogenesis | 107/2100 | 463/18723 | 1.43e-13 | 4.08e-11 | 107 |
GO:004225416 | Endometrium | AEH | ribosome biogenesis | 67/2100 | 299/18723 | 1.95e-08 | 1.18e-06 | 67 |
GO:00063648 | Endometrium | AEH | rRNA processing | 47/2100 | 225/18723 | 1.78e-05 | 3.65e-04 | 47 |
GO:00160728 | Endometrium | AEH | rRNA metabolic process | 48/2100 | 236/18723 | 3.01e-05 | 5.54e-04 | 48 |
GO:00063258 | Endometrium | AEH | chromatin organization | 64/2100 | 409/18723 | 3.69e-03 | 2.52e-02 | 64 |
GO:00344707 | Endometrium | AEH | ncRNA processing | 62/2100 | 395/18723 | 3.93e-03 | 2.65e-02 | 62 |
GO:002261317 | Endometrium | EEC | ribonucleoprotein complex biogenesis | 108/2168 | 463/18723 | 4.60e-13 | 9.86e-11 | 108 |
GO:004225417 | Endometrium | EEC | ribosome biogenesis | 68/2168 | 299/18723 | 2.90e-08 | 1.68e-06 | 68 |
GO:000636416 | Endometrium | EEC | rRNA processing | 48/2168 | 225/18723 | 1.88e-05 | 3.50e-04 | 48 |
GO:001607216 | Endometrium | EEC | rRNA metabolic process | 49/2168 | 236/18723 | 3.27e-05 | 5.62e-04 | 49 |
GO:000632513 | Endometrium | EEC | chromatin organization | 65/2168 | 409/18723 | 4.98e-03 | 3.14e-02 | 65 |
GO:003447012 | Endometrium | EEC | ncRNA processing | 63/2168 | 395/18723 | 5.20e-03 | 3.26e-02 | 63 |
GO:002261327 | Esophagus | HGIN | ribonucleoprotein complex biogenesis | 158/2587 | 463/18723 | 2.61e-29 | 5.23e-26 | 158 |
GO:004225426 | Esophagus | HGIN | ribosome biogenesis | 101/2587 | 299/18723 | 8.74e-19 | 4.03e-16 | 101 |
GO:001607219 | Esophagus | HGIN | rRNA metabolic process | 72/2587 | 236/18723 | 2.26e-11 | 2.56e-09 | 72 |
GO:000636419 | Esophagus | HGIN | rRNA processing | 69/2587 | 225/18723 | 4.53e-11 | 5.04e-09 | 69 |
GO:003447010 | Esophagus | HGIN | ncRNA processing | 97/2587 | 395/18723 | 5.92e-09 | 3.90e-07 | 97 |
GO:000632516 | Esophagus | HGIN | chromatin organization | 92/2587 | 409/18723 | 1.05e-06 | 4.16e-05 | 92 |
GO:00346606 | Esophagus | HGIN | ncRNA metabolic process | 104/2587 | 485/18723 | 2.26e-06 | 8.23e-05 | 104 |
GO:0022613111 | Esophagus | ESCC | ribonucleoprotein complex biogenesis | 365/8552 | 463/18723 | 1.74e-49 | 1.11e-45 | 365 |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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