![]() |
|||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Gene: PET117 |
Gene summary for PET117 |
![]() |
Gene information | Species | Human | Gene symbol | PET117 | Gene ID | 100303755 |
Gene name | PET117 cytochrome c oxidase chaperone | |
Gene Alias | CSRP2BP | |
Cytomap | 20p11.23 | |
Gene Type | protein-coding | GO ID | GO:0006996 | UniProtAcc | L0R6F6 |
Top |
Malignant transformation analysis |
![]() |
![]() |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100303755 | PET117 | P80T-E | Human | Esophagus | ESCC | 6.35e-27 | 6.94e-01 | 0.155 |
100303755 | PET117 | P82T-E | Human | Esophagus | ESCC | 7.26e-10 | 4.53e-01 | 0.1072 |
100303755 | PET117 | P83T-E | Human | Esophagus | ESCC | 2.31e-36 | 1.07e+00 | 0.1738 |
100303755 | PET117 | P89T-E | Human | Esophagus | ESCC | 2.84e-09 | 5.12e-01 | 0.1752 |
100303755 | PET117 | P91T-E | Human | Esophagus | ESCC | 7.53e-04 | 4.08e-01 | 0.1828 |
100303755 | PET117 | P107T-E | Human | Esophagus | ESCC | 2.30e-15 | 3.83e-01 | 0.171 |
100303755 | PET117 | P126T-E | Human | Esophagus | ESCC | 9.76e-04 | 4.47e-01 | 0.1125 |
100303755 | PET117 | P127T-E | Human | Esophagus | ESCC | 1.22e-04 | 8.37e-02 | 0.0826 |
100303755 | PET117 | P128T-E | Human | Esophagus | ESCC | 3.62e-32 | 9.35e-01 | 0.1241 |
100303755 | PET117 | P130T-E | Human | Esophagus | ESCC | 6.94e-17 | 3.03e-01 | 0.1676 |
100303755 | PET117 | HCC1_Meng | Human | Liver | HCC | 9.23e-46 | 6.91e-02 | 0.0246 |
100303755 | PET117 | HCC2_Meng | Human | Liver | HCC | 2.91e-09 | 7.79e-03 | 0.0107 |
100303755 | PET117 | HCC1 | Human | Liver | HCC | 2.06e-02 | 1.91e+00 | 0.5336 |
100303755 | PET117 | HCC2 | Human | Liver | HCC | 2.49e-08 | 3.19e+00 | 0.5341 |
100303755 | PET117 | S014 | Human | Liver | HCC | 3.00e-08 | 2.75e-01 | 0.2254 |
100303755 | PET117 | S015 | Human | Liver | HCC | 1.03e-15 | 5.36e-01 | 0.2375 |
100303755 | PET117 | S016 | Human | Liver | HCC | 5.90e-10 | 4.06e-01 | 0.2243 |
100303755 | PET117 | S028 | Human | Liver | HCC | 4.60e-07 | 4.22e-01 | 0.2503 |
100303755 | PET117 | S029 | Human | Liver | HCC | 9.02e-05 | 2.43e-01 | 0.2581 |
100303755 | PET117 | C04 | Human | Oral cavity | OSCC | 5.18e-03 | 3.71e-01 | 0.2633 |
Page: 1 2 3 4 |
![]() |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
Top |
Malignant transformation related pathway analysis |
![]() |
![]() |
Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
![]() |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
GO:0033108110 | Esophagus | ESCC | mitochondrial respiratory chain complex assembly | 83/8552 | 93/18723 | 9.56e-19 | 1.05e-16 | 83 |
GO:001700413 | Esophagus | ESCC | cytochrome complex assembly | 34/8552 | 36/18723 | 5.08e-10 | 1.31e-08 | 34 |
GO:000853512 | Esophagus | ESCC | respiratory chain complex IV assembly | 24/8552 | 26/18723 | 6.87e-07 | 8.99e-06 | 24 |
GO:003361712 | Esophagus | ESCC | mitochondrial cytochrome c oxidase assembly | 21/8552 | 22/18723 | 8.75e-07 | 1.13e-05 | 21 |
GO:003310812 | Liver | HCC | mitochondrial respiratory chain complex assembly | 80/7958 | 93/18723 | 3.47e-18 | 4.15e-16 | 80 |
GO:00170041 | Liver | HCC | cytochrome complex assembly | 30/7958 | 36/18723 | 5.69e-07 | 9.03e-06 | 30 |
GO:00336171 | Liver | HCC | mitochondrial cytochrome c oxidase assembly | 20/7958 | 22/18723 | 3.00e-06 | 3.98e-05 | 20 |
GO:00085351 | Liver | HCC | respiratory chain complex IV assembly | 22/7958 | 26/18723 | 1.23e-05 | 1.39e-04 | 22 |
GO:003310818 | Oral cavity | OSCC | mitochondrial respiratory chain complex assembly | 75/7305 | 93/18723 | 2.17e-16 | 1.68e-14 | 75 |
GO:00170043 | Oral cavity | OSCC | cytochrome complex assembly | 31/7305 | 36/18723 | 7.28e-09 | 1.53e-07 | 31 |
GO:00336172 | Oral cavity | OSCC | mitochondrial cytochrome c oxidase assembly | 19/7305 | 22/18723 | 6.52e-06 | 7.21e-05 | 19 |
GO:00085352 | Oral cavity | OSCC | respiratory chain complex IV assembly | 21/7305 | 26/18723 | 1.66e-05 | 1.64e-04 | 21 |
GO:003310819 | Oral cavity | LP | mitochondrial respiratory chain complex assembly | 63/4623 | 93/18723 | 2.24e-18 | 4.13e-16 | 63 |
GO:001700412 | Oral cavity | LP | cytochrome complex assembly | 25/4623 | 36/18723 | 1.93e-08 | 7.11e-07 | 25 |
GO:003361711 | Oral cavity | LP | mitochondrial cytochrome c oxidase assembly | 17/4623 | 22/18723 | 3.24e-07 | 9.53e-06 | 17 |
GO:000853511 | Oral cavity | LP | respiratory chain complex IV assembly | 18/4623 | 26/18723 | 2.13e-06 | 4.81e-05 | 18 |
Page: 1 |
![]() |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
Top |
Cell-cell communication analysis |
![]() |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
Top |
Single-cell gene regulatory network inference analysis |
![]() |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
Top |
Somatic mutation of malignant transformation related genes |
![]() |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
PET117 | SNV | Missense_Mutation | rs76168870 | c.139N>T | p.Arg47Trp | p.R47W | Q6UWS5 | protein_coding | deleterious(0.03) | possibly_damaging(0.793) | TCGA-BS-A0UV-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | III/IV | Unknown | Unknown | SD |
PET117 | insertion | Frame_Shift_Ins | novel | c.141_142insA | p.Glu50ArgfsTer14 | p.E50Rfs*14 | Q6UWS5 | protein_coding | TCGA-EO-A22U-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD |
Page: 1 |
Top |
Related drugs of malignant transformation related genes |
![]() |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
Page: 1 |