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Gene: FGD5-AS1 |
Gene summary for FGD5-AS1 |
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Gene information | Species | Human | Gene symbol | FGD5-AS1 | Gene ID | 100505641 |
Gene name | FGD5 antisense RNA 1 | |
Gene Alias | FGD5-AS1 | |
Cytomap | 3p25.1 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100505641 | FGD5-AS1 | P36T-E | Human | Esophagus | ESCC | 1.60e-19 | 5.29e-01 | 0.1187 |
100505641 | FGD5-AS1 | P37T-E | Human | Esophagus | ESCC | 4.29e-10 | 2.25e-01 | 0.1371 |
100505641 | FGD5-AS1 | P38T-E | Human | Esophagus | ESCC | 8.77e-04 | 2.36e-01 | 0.127 |
100505641 | FGD5-AS1 | P39T-E | Human | Esophagus | ESCC | 1.19e-21 | 1.38e-01 | 0.0894 |
100505641 | FGD5-AS1 | P40T-E | Human | Esophagus | ESCC | 4.15e-13 | 1.84e-01 | 0.109 |
100505641 | FGD5-AS1 | P42T-E | Human | Esophagus | ESCC | 7.97e-17 | 2.14e-01 | 0.1175 |
100505641 | FGD5-AS1 | P44T-E | Human | Esophagus | ESCC | 1.08e-14 | 2.66e-01 | 0.1096 |
100505641 | FGD5-AS1 | P47T-E | Human | Esophagus | ESCC | 6.37e-19 | 1.49e-01 | 0.1067 |
100505641 | FGD5-AS1 | P48T-E | Human | Esophagus | ESCC | 4.27e-05 | 1.06e-01 | 0.0959 |
100505641 | FGD5-AS1 | P49T-E | Human | Esophagus | ESCC | 1.19e-07 | 6.48e-01 | 0.1768 |
100505641 | FGD5-AS1 | P52T-E | Human | Esophagus | ESCC | 2.36e-14 | 1.76e-01 | 0.1555 |
100505641 | FGD5-AS1 | P54T-E | Human | Esophagus | ESCC | 2.29e-08 | 1.54e-01 | 0.0975 |
100505641 | FGD5-AS1 | P56T-E | Human | Esophagus | ESCC | 2.39e-04 | 4.15e-01 | 0.1613 |
100505641 | FGD5-AS1 | P57T-E | Human | Esophagus | ESCC | 1.30e-19 | 2.21e-01 | 0.0926 |
100505641 | FGD5-AS1 | P61T-E | Human | Esophagus | ESCC | 7.64e-13 | 1.75e-01 | 0.099 |
100505641 | FGD5-AS1 | P62T-E | Human | Esophagus | ESCC | 1.36e-17 | 2.22e-01 | 0.1302 |
100505641 | FGD5-AS1 | P65T-E | Human | Esophagus | ESCC | 1.49e-12 | 6.75e-02 | 0.0978 |
100505641 | FGD5-AS1 | P74T-E | Human | Esophagus | ESCC | 3.21e-10 | 2.72e-01 | 0.1479 |
100505641 | FGD5-AS1 | P75T-E | Human | Esophagus | ESCC | 4.58e-16 | 1.85e-01 | 0.1125 |
100505641 | FGD5-AS1 | P76T-E | Human | Esophagus | ESCC | 5.10e-18 | 2.38e-01 | 0.1207 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
Page: 1 |