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Gene: CCDC18-AS1 |
Gene summary for CCDC18-AS1 |
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Gene information | Species | Human | Gene symbol | CCDC18-AS1 | Gene ID | 100131564 |
Gene name | CCDC18 antisense RNA 1 | |
Gene Alias | CCDC18-AS1 | |
Cytomap | 1p22.1 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100131564 | CCDC18-AS1 | HTA11_99999965104_69814 | Human | Colorectum | MSS | 5.00e-45 | 1.24e+00 | 0.281 |
100131564 | CCDC18-AS1 | HTA11_99999971662_82457 | Human | Colorectum | MSS | 1.28e-34 | 6.77e-01 | 0.3859 |
100131564 | CCDC18-AS1 | HTA11_99999973899_84307 | Human | Colorectum | MSS | 2.92e-03 | 2.41e-01 | 0.2585 |
100131564 | CCDC18-AS1 | HTA11_99999974143_84620 | Human | Colorectum | MSS | 1.29e-28 | 5.17e-01 | 0.3005 |
100131564 | CCDC18-AS1 | AEH-subject1 | Human | Endometrium | AEH | 3.48e-12 | 2.48e-01 | -0.3059 |
100131564 | CCDC18-AS1 | AEH-subject2 | Human | Endometrium | AEH | 4.27e-13 | 3.28e-01 | -0.2525 |
100131564 | CCDC18-AS1 | AEH-subject3 | Human | Endometrium | AEH | 4.06e-07 | 2.07e-01 | -0.2576 |
100131564 | CCDC18-AS1 | AEH-subject4 | Human | Endometrium | AEH | 7.11e-08 | 2.27e-01 | -0.2657 |
100131564 | CCDC18-AS1 | AEH-subject5 | Human | Endometrium | AEH | 1.58e-12 | 2.78e-01 | -0.2953 |
100131564 | CCDC18-AS1 | EEC-subject1 | Human | Endometrium | EEC | 4.07e-08 | 1.82e-01 | -0.2682 |
100131564 | CCDC18-AS1 | EEC-subject2 | Human | Endometrium | EEC | 8.71e-07 | 1.55e-01 | -0.2607 |
100131564 | CCDC18-AS1 | EEC-subject3 | Human | Endometrium | EEC | 7.85e-04 | 1.26e-01 | -0.2525 |
100131564 | CCDC18-AS1 | EEC-subject4 | Human | Endometrium | EEC | 3.89e-10 | 2.67e-01 | -0.2571 |
100131564 | CCDC18-AS1 | EEC-subject5 | Human | Endometrium | EEC | 1.82e-05 | 1.61e-01 | -0.249 |
100131564 | CCDC18-AS1 | LZE4T | Human | Esophagus | ESCC | 5.16e-08 | 3.45e-01 | 0.0811 |
100131564 | CCDC18-AS1 | LZE7T | Human | Esophagus | ESCC | 9.77e-12 | 4.22e-01 | 0.0667 |
100131564 | CCDC18-AS1 | LZE8T | Human | Esophagus | ESCC | 6.94e-06 | 2.97e-01 | 0.067 |
100131564 | CCDC18-AS1 | LZE20T | Human | Esophagus | ESCC | 1.48e-12 | 4.90e-01 | 0.0662 |
100131564 | CCDC18-AS1 | LZE22D1 | Human | Esophagus | HGIN | 9.67e-04 | 3.24e-01 | 0.0595 |
100131564 | CCDC18-AS1 | LZE22T | Human | Esophagus | ESCC | 5.67e-06 | 2.66e-01 | 0.068 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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