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Gene: SNHG31 |
Gene summary for SNHG31 |
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Gene information | Species | Human | Gene symbol | SNHG31 | Gene ID | 101928103 |
Gene name | small nucleolar RNA host gene 31 | |
Gene Alias | SNHG31 | |
Cytomap | 2q35 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
101928103 | SNHG31 | HTA11_4255_2000001011 | Human | Colorectum | SER | 2.49e-08 | 4.15e-01 | 0.0446 |
101928103 | SNHG31 | HTA11_9408_2000001011 | Human | Colorectum | AD | 2.94e-18 | 8.43e-01 | 0.0451 |
101928103 | SNHG31 | HTA11_8622_2000001021 | Human | Colorectum | SER | 7.52e-14 | 7.61e-01 | 0.0528 |
101928103 | SNHG31 | HTA11_7663_2000001011 | Human | Colorectum | SER | 1.35e-33 | 1.71e+00 | 0.0131 |
101928103 | SNHG31 | HTA11_10623_2000001011 | Human | Colorectum | AD | 1.29e-16 | 6.78e-01 | -0.0177 |
101928103 | SNHG31 | HTA11_6801_2000001011 | Human | Colorectum | SER | 1.41e-06 | 3.87e-01 | 0.0171 |
101928103 | SNHG31 | HTA11_10711_2000001011 | Human | Colorectum | AD | 2.04e-19 | 4.37e-01 | 0.0338 |
101928103 | SNHG31 | HTA11_7696_3000711011 | Human | Colorectum | AD | 2.85e-36 | 6.72e-01 | 0.0674 |
101928103 | SNHG31 | HTA11_6818_2000001011 | Human | Colorectum | AD | 4.20e-40 | 1.89e+00 | 0.0112 |
101928103 | SNHG31 | HTA11_7469_2000001011 | Human | Colorectum | AD | 4.62e-21 | 1.08e+00 | -0.0124 |
101928103 | SNHG31 | HTA11_11156_2000001011 | Human | Colorectum | AD | 1.19e-21 | 1.05e+00 | 0.0397 |
101928103 | SNHG31 | HTA11_6818_2000001021 | Human | Colorectum | AD | 4.03e-62 | 2.07e+00 | 0.0588 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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