![]() |
|||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Gene: LINC00667 |
Gene summary for LINC00667 |
![]() |
Gene information | Species | Human | Gene symbol | LINC00667 | Gene ID | 339290 |
Gene name | long intergenic non-protein coding RNA 667 | |
Gene Alias | LINC00667 | |
Cytomap | 18p11.31 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
Top |
Malignant transformation analysis |
![]() |
![]() |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
339290 | LINC00667 | P21T-E | Human | Esophagus | ESCC | 1.23e-30 | 6.34e-01 | 0.1617 |
339290 | LINC00667 | P22T-E | Human | Esophagus | ESCC | 1.64e-25 | 4.61e-01 | 0.1236 |
339290 | LINC00667 | P23T-E | Human | Esophagus | ESCC | 1.13e-25 | 7.12e-01 | 0.108 |
339290 | LINC00667 | P24T-E | Human | Esophagus | ESCC | 3.01e-16 | 2.40e-01 | 0.1287 |
339290 | LINC00667 | P26T-E | Human | Esophagus | ESCC | 7.50e-58 | 1.03e+00 | 0.1276 |
339290 | LINC00667 | P27T-E | Human | Esophagus | ESCC | 9.76e-39 | 7.16e-01 | 0.1055 |
339290 | LINC00667 | P28T-E | Human | Esophagus | ESCC | 3.30e-14 | 3.38e-01 | 0.1149 |
339290 | LINC00667 | P30T-E | Human | Esophagus | ESCC | 3.52e-22 | 6.71e-01 | 0.137 |
339290 | LINC00667 | P31T-E | Human | Esophagus | ESCC | 1.04e-46 | 7.69e-01 | 0.1251 |
339290 | LINC00667 | P32T-E | Human | Esophagus | ESCC | 3.81e-39 | 6.72e-01 | 0.1666 |
339290 | LINC00667 | P36T-E | Human | Esophagus | ESCC | 3.32e-11 | 4.07e-01 | 0.1187 |
339290 | LINC00667 | P37T-E | Human | Esophagus | ESCC | 2.44e-21 | 3.46e-01 | 0.1371 |
339290 | LINC00667 | P39T-E | Human | Esophagus | ESCC | 3.14e-10 | 2.62e-01 | 0.0894 |
339290 | LINC00667 | P40T-E | Human | Esophagus | ESCC | 9.45e-13 | 3.75e-01 | 0.109 |
339290 | LINC00667 | P42T-E | Human | Esophagus | ESCC | 2.76e-18 | 4.65e-01 | 0.1175 |
339290 | LINC00667 | P44T-E | Human | Esophagus | ESCC | 3.30e-20 | 4.01e-01 | 0.1096 |
339290 | LINC00667 | P47T-E | Human | Esophagus | ESCC | 4.96e-17 | 2.70e-01 | 0.1067 |
339290 | LINC00667 | P48T-E | Human | Esophagus | ESCC | 9.33e-12 | 2.78e-01 | 0.0959 |
339290 | LINC00667 | P49T-E | Human | Esophagus | ESCC | 6.81e-05 | 5.32e-01 | 0.1768 |
339290 | LINC00667 | P52T-E | Human | Esophagus | ESCC | 3.10e-22 | 5.23e-01 | 0.1555 |
Page: 1 2 3 4 5 |
![]() |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
Top |
Malignant transformation related pathway analysis |
![]() |
![]() |
Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
![]() |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
![]() |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
Top |
Cell-cell communication analysis |
![]() |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
Top |
Single-cell gene regulatory network inference analysis |
![]() |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
Top |
Somatic mutation of malignant transformation related genes |
![]() |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
Top |
Related drugs of malignant transformation related genes |
![]() |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
Page: 1 |