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Gene: LINC00665 |
Gene summary for LINC00665 |
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Gene information | Species | Human | Gene symbol | LINC00665 | Gene ID | 100506930 |
Gene name | long intergenic non-protein coding RNA 665 | |
Gene Alias | CIP2A-BP | |
Cytomap | 19q13.12 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
100506930 | LINC00665 | P42T-E | Human | Esophagus | ESCC | 1.29e-02 | 1.42e-01 | 0.1175 |
100506930 | LINC00665 | P44T-E | Human | Esophagus | ESCC | 3.60e-16 | 3.99e-01 | 0.1096 |
100506930 | LINC00665 | P47T-E | Human | Esophagus | ESCC | 9.33e-03 | 6.23e-02 | 0.1067 |
100506930 | LINC00665 | P48T-E | Human | Esophagus | ESCC | 2.80e-16 | 4.10e-01 | 0.0959 |
100506930 | LINC00665 | P52T-E | Human | Esophagus | ESCC | 1.21e-42 | 9.26e-01 | 0.1555 |
100506930 | LINC00665 | P54T-E | Human | Esophagus | ESCC | 9.66e-44 | 9.04e-01 | 0.0975 |
100506930 | LINC00665 | P56T-E | Human | Esophagus | ESCC | 2.25e-05 | 6.19e-01 | 0.1613 |
100506930 | LINC00665 | P57T-E | Human | Esophagus | ESCC | 1.12e-06 | 2.06e-01 | 0.0926 |
100506930 | LINC00665 | P61T-E | Human | Esophagus | ESCC | 5.00e-09 | 2.09e-01 | 0.099 |
100506930 | LINC00665 | P62T-E | Human | Esophagus | ESCC | 1.63e-22 | 4.01e-01 | 0.1302 |
100506930 | LINC00665 | P65T-E | Human | Esophagus | ESCC | 9.52e-06 | 2.13e-01 | 0.0978 |
100506930 | LINC00665 | P74T-E | Human | Esophagus | ESCC | 1.84e-43 | 9.53e-01 | 0.1479 |
100506930 | LINC00665 | P75T-E | Human | Esophagus | ESCC | 5.33e-58 | 1.05e+00 | 0.1125 |
100506930 | LINC00665 | P76T-E | Human | Esophagus | ESCC | 7.74e-08 | 2.30e-01 | 0.1207 |
100506930 | LINC00665 | P79T-E | Human | Esophagus | ESCC | 8.07e-47 | 8.74e-01 | 0.1154 |
100506930 | LINC00665 | P82T-E | Human | Esophagus | ESCC | 4.67e-10 | 5.13e-01 | 0.1072 |
100506930 | LINC00665 | P83T-E | Human | Esophagus | ESCC | 8.07e-15 | 4.87e-01 | 0.1738 |
100506930 | LINC00665 | P89T-E | Human | Esophagus | ESCC | 1.22e-11 | 6.82e-01 | 0.1752 |
100506930 | LINC00665 | P126T-E | Human | Esophagus | ESCC | 2.87e-05 | 3.77e-01 | 0.1125 |
100506930 | LINC00665 | P127T-E | Human | Esophagus | ESCC | 9.27e-09 | 1.97e-01 | 0.0826 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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