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Gene: LINC00467 |
Gene summary for LINC00467 |
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Gene information | Species | Human | Gene symbol | LINC00467 | Gene ID | 84791 |
Gene name | long intergenic non-protein coding RNA 467 | |
Gene Alias | C1orf97 | |
Cytomap | 1q32.3 | |
Gene Type | ncRNA | GO ID | NA | UniProtAcc | NA |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
84791 | LINC00467 | P23T-E | Human | Esophagus | ESCC | 4.35e-14 | 3.56e-01 | 0.108 |
84791 | LINC00467 | P24T-E | Human | Esophagus | ESCC | 7.32e-12 | 2.01e-01 | 0.1287 |
84791 | LINC00467 | P28T-E | Human | Esophagus | ESCC | 1.15e-12 | 1.95e-01 | 0.1149 |
84791 | LINC00467 | P30T-E | Human | Esophagus | ESCC | 3.22e-10 | 2.61e-01 | 0.137 |
84791 | LINC00467 | P31T-E | Human | Esophagus | ESCC | 1.05e-16 | 2.40e-01 | 0.1251 |
84791 | LINC00467 | P32T-E | Human | Esophagus | ESCC | 1.49e-12 | 3.06e-01 | 0.1666 |
84791 | LINC00467 | P36T-E | Human | Esophagus | ESCC | 7.56e-10 | 3.40e-01 | 0.1187 |
84791 | LINC00467 | P37T-E | Human | Esophagus | ESCC | 5.32e-05 | 1.76e-01 | 0.1371 |
84791 | LINC00467 | P39T-E | Human | Esophagus | ESCC | 3.91e-12 | 2.10e-01 | 0.0894 |
84791 | LINC00467 | P40T-E | Human | Esophagus | ESCC | 4.75e-09 | 2.29e-01 | 0.109 |
84791 | LINC00467 | P42T-E | Human | Esophagus | ESCC | 1.49e-06 | 2.10e-01 | 0.1175 |
84791 | LINC00467 | P48T-E | Human | Esophagus | ESCC | 2.21e-05 | 9.45e-02 | 0.0959 |
84791 | LINC00467 | P52T-E | Human | Esophagus | ESCC | 4.03e-06 | 1.33e-01 | 0.1555 |
84791 | LINC00467 | P54T-E | Human | Esophagus | ESCC | 5.19e-03 | 8.38e-02 | 0.0975 |
84791 | LINC00467 | P56T-E | Human | Esophagus | ESCC | 9.48e-06 | 8.57e-01 | 0.1613 |
84791 | LINC00467 | P57T-E | Human | Esophagus | ESCC | 1.06e-13 | 1.17e-01 | 0.0926 |
84791 | LINC00467 | P61T-E | Human | Esophagus | ESCC | 2.17e-17 | 3.97e-01 | 0.099 |
84791 | LINC00467 | P62T-E | Human | Esophagus | ESCC | 1.87e-29 | 5.82e-01 | 0.1302 |
84791 | LINC00467 | P65T-E | Human | Esophagus | ESCC | 4.38e-09 | 2.04e-01 | 0.0978 |
84791 | LINC00467 | P74T-E | Human | Esophagus | ESCC | 8.78e-39 | 8.98e-01 | 0.1479 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
Page: 1 |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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