|
Gene: KIAA0196 |
Gene summary for KIAA0196 |
Gene summary. |
Gene information | Species | Human | Gene symbol | KIAA0196 | Gene ID | 9897 |
Gene name | WASH complex subunit 5 | |
Gene Alias | KIAA0196 | |
Cytomap | 8q24.13 | |
Gene Type | protein-coding | GO ID | GO:0000003 | UniProtAcc | E7EQI7 |
Top |
Malignant transformation analysis |
Identification of the aberrant gene expression in precancerous and cancerous lesions by comparing the gene expression of stem-like cells in diseased tissues with normal stem cells |
Malignant transformation involving gene list. |
Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
9897 | KIAA0196 | P23T-E | Human | Esophagus | ESCC | 2.58e-20 | 4.11e-01 | 0.108 |
9897 | KIAA0196 | P24T-E | Human | Esophagus | ESCC | 6.80e-13 | 2.49e-01 | 0.1287 |
9897 | KIAA0196 | P26T-E | Human | Esophagus | ESCC | 6.41e-24 | 4.22e-01 | 0.1276 |
9897 | KIAA0196 | P27T-E | Human | Esophagus | ESCC | 1.62e-14 | 3.14e-01 | 0.1055 |
9897 | KIAA0196 | P28T-E | Human | Esophagus | ESCC | 1.73e-11 | 1.80e-01 | 0.1149 |
9897 | KIAA0196 | P30T-E | Human | Esophagus | ESCC | 3.53e-18 | 5.00e-01 | 0.137 |
9897 | KIAA0196 | P31T-E | Human | Esophagus | ESCC | 5.47e-22 | 4.20e-01 | 0.1251 |
9897 | KIAA0196 | P32T-E | Human | Esophagus | ESCC | 2.03e-17 | 2.17e-01 | 0.1666 |
9897 | KIAA0196 | P36T-E | Human | Esophagus | ESCC | 4.05e-14 | 4.71e-01 | 0.1187 |
9897 | KIAA0196 | P37T-E | Human | Esophagus | ESCC | 6.94e-18 | 3.07e-01 | 0.1371 |
9897 | KIAA0196 | P38T-E | Human | Esophagus | ESCC | 1.99e-11 | 4.06e-01 | 0.127 |
9897 | KIAA0196 | P39T-E | Human | Esophagus | ESCC | 2.29e-08 | 1.88e-01 | 0.0894 |
9897 | KIAA0196 | P40T-E | Human | Esophagus | ESCC | 5.04e-09 | 2.65e-01 | 0.109 |
9897 | KIAA0196 | P42T-E | Human | Esophagus | ESCC | 2.30e-07 | 2.48e-01 | 0.1175 |
9897 | KIAA0196 | P44T-E | Human | Esophagus | ESCC | 2.71e-07 | 1.85e-01 | 0.1096 |
9897 | KIAA0196 | P47T-E | Human | Esophagus | ESCC | 3.21e-16 | 1.71e-01 | 0.1067 |
9897 | KIAA0196 | P48T-E | Human | Esophagus | ESCC | 1.33e-07 | 1.35e-01 | 0.0959 |
9897 | KIAA0196 | P49T-E | Human | Esophagus | ESCC | 5.72e-07 | 9.77e-01 | 0.1768 |
9897 | KIAA0196 | P52T-E | Human | Esophagus | ESCC | 1.17e-12 | 2.04e-01 | 0.1555 |
9897 | KIAA0196 | P54T-E | Human | Esophagus | ESCC | 5.33e-17 | 3.71e-01 | 0.0975 |
Page: 1 2 3 4 5 |
Transcriptomic changes along malignancy continuum. |
∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
Top |
Malignant transformation related pathway analysis |
Find out the enriched GO biological processes and KEGG pathways involved in transition from healthy to precancer to cancer |
Figure of enriched GO biological processes. |
Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | |
Colorectum | SER | |
Colorectum | MSS | |
Colorectum | MSI-H | |
Colorectum | FAP |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
Page: 1 2 3 4 5 6 7 8 9 |
Enriched GO biological processes. |
GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
Page: 1 |
Enriched KEGG pathways. |
Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
hsa0414422 | Liver | HCC | Endocytosis | 178/4020 | 251/8465 | 2.03e-14 | 5.22e-13 | 2.91e-13 | 178 |
hsa0414432 | Liver | HCC | Endocytosis | 178/4020 | 251/8465 | 2.03e-14 | 5.22e-13 | 2.91e-13 | 178 |
Page: 1 |
Top |
Cell-cell communication analysis |
Identification of potential cell-cell interactions between two cell types and their ligand-receptor pairs for different disease states |
Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
Page: 1 |
Top |
Single-cell gene regulatory network inference analysis |
Find out the significant the regulons (TFs) and the target genes of each regulon across cell types for different disease states |
TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
Page: 1 |
Top |
Somatic mutation of malignant transformation related genes |
Annotation of somatic variants for genes involved in malignant transformation |
Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
Page: 1 |
Top |
Related drugs of malignant transformation related genes |
Identification of chemicals and drugs interact with genes involved in malignant transfromation |
(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
Page: 1 |