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Gene: MRPL41 |
Gene summary for MRPL41 |
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Gene information | Species | Human | Gene symbol | MRPL41 | Gene ID | 64975 |
Gene name | mitochondrial ribosomal protein L41 | |
Gene Alias | BMRP | |
Cytomap | 9q34.3 | |
Gene Type | protein-coding | GO ID | GO:0006412 | UniProtAcc | Q8IXM3 |
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Malignant transformation analysis |
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Entrez ID | Symbol | Replicates | Species | Organ | Tissue | Adj P-value | Log2FC | Malignancy |
64975 | MRPL41 | Pat29-A | Human | Stomach | CAG with IM | 2.36e-22 | 5.97e-01 | -0.2769 |
64975 | MRPL41 | CAG_3 | Human | Stomach | CAG | 6.44e-04 | 9.25e-02 | -0.2766 |
64975 | MRPL41 | WIM_2 | Human | Stomach | WIM | 7.83e-03 | 3.89e-01 | 0.1159 |
64975 | MRPL41 | SIM_1 | Human | Stomach | SIM | 3.91e-04 | 3.18e-01 | 0.3573 |
64975 | MRPL41 | SIM_2 | Human | Stomach | SIM | 1.66e-16 | 6.62e-01 | 0.3139 |
64975 | MRPL41 | male-WTA | Human | Thyroid | PTC | 5.11e-36 | 3.37e-01 | 0.1037 |
64975 | MRPL41 | PTC01 | Human | Thyroid | PTC | 3.80e-19 | 4.49e-01 | 0.1899 |
64975 | MRPL41 | PTC03 | Human | Thyroid | PTC | 1.62e-03 | 3.96e-01 | 0.1784 |
64975 | MRPL41 | PTC04 | Human | Thyroid | PTC | 6.86e-17 | 5.15e-01 | 0.1927 |
64975 | MRPL41 | PTC05 | Human | Thyroid | PTC | 1.24e-29 | 1.08e+00 | 0.2065 |
64975 | MRPL41 | PTC06 | Human | Thyroid | PTC | 5.98e-45 | 1.02e+00 | 0.2057 |
64975 | MRPL41 | PTC07 | Human | Thyroid | PTC | 1.37e-61 | 1.01e+00 | 0.2044 |
64975 | MRPL41 | ATC08 | Human | Thyroid | ATC | 7.82e-03 | 1.82e-01 | 0.0541 |
64975 | MRPL41 | ATC09 | Human | Thyroid | ATC | 2.89e-25 | 1.03e+00 | 0.2871 |
64975 | MRPL41 | ATC11 | Human | Thyroid | ATC | 1.30e-14 | 1.18e+00 | 0.3386 |
64975 | MRPL41 | ATC12 | Human | Thyroid | ATC | 2.81e-12 | 2.80e-01 | 0.34 |
64975 | MRPL41 | ATC13 | Human | Thyroid | ATC | 6.99e-40 | 1.14e+00 | 0.34 |
64975 | MRPL41 | ATC1 | Human | Thyroid | ATC | 1.32e-26 | 1.17e+00 | 0.2878 |
64975 | MRPL41 | ATC2 | Human | Thyroid | ATC | 1.23e-26 | 2.49e+00 | 0.34 |
64975 | MRPL41 | ATC3 | Human | Thyroid | ATC | 1.42e-19 | 1.05e+00 | 0.338 |
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∗log2FC in expression of this searched gene in stem-like cells from each diseased tissue sample relative to stem-like cells in normal samples in each tissue plotted against the malignancy continuum. Samples are colored based on if they are from different disease stage. |
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Malignant transformation related pathway analysis |
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Tissue | Disease Stage | Enriched GO biological Processes |
Colorectum | AD | ![]() |
Colorectum | SER | ![]() |
Colorectum | MSS | ![]() |
Colorectum | MSI-H | ![]() |
Colorectum | FAP | ![]() |
∗Top 15 enriched GO BP terms are showed in the bar plot of each disease state in each tissue. Each row represents a significant GO biological process which is colored according to the -log10(p.adjust). |
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GO ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | Count |
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Pathway ID | Tissue | Disease Stage | Description | Gene Ratio | Bg Ratio | pvalue | p.adjust | qvalue | Count |
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Cell-cell communication analysis |
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Ligand | Receptor | LRpair | Pathway | Tissue | Disease Stage |
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Single-cell gene regulatory network inference analysis |
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TF | Cell Type | Tissue | Disease Stage | Target Gene | RSS | Regulon Activity |
∗The dot plots of a searched regulon are shown for all cell subpopulations in each disease state of each tissue based on the regulon specific score inferred using pySCENIC and by calculating the average expression. |
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Somatic mutation of malignant transformation related genes |
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Hugo Symbol | Variant Class | Variant Classification | dbSNP RS | HGVSc | HGVSp | HGVSp Short | SWISSPROT | BIOTYPE | SIFT | PolyPhen | Tumor Sample Barcode | Tissue | Histology | Sex | Age | Stage | Therapy Types | Drugs | Outcome |
MRPL41 | insertion | In_Frame_Ins | novel | c.250_251insGAG | p.Thr84delinsArgAla | p.T84delinsRA | Q8IXM3 | protein_coding | TCGA-DS-A1OD-01 | Cervix | cervical & endocervical cancer | Female | <65 | I/II | Chemotherapy | cisplatin | SD | ||
MRPL41 | SNV | Missense_Mutation | rs376218719 | c.156G>T | p.Gln52His | p.Q52H | Q8IXM3 | protein_coding | tolerated(0.12) | possibly_damaging(0.67) | TCGA-4T-AA8H-01 | Colorectum | colon adenocarcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
MRPL41 | SNV | Missense_Mutation | novel | c.352N>T | p.Gly118Cys | p.G118C | Q8IXM3 | protein_coding | deleterious(0.01) | probably_damaging(1) | TCGA-AJ-A3EK-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Chemotherapy | carboplatin | CR |
MRPL41 | SNV | Missense_Mutation | c.207N>T | p.Lys69Asn | p.K69N | Q8IXM3 | protein_coding | tolerated(0.08) | benign(0.045) | TCGA-BS-A0UF-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD | |
MRPL41 | SNV | Missense_Mutation | rs773179110 | c.169N>A | p.Val57Ile | p.V57I | Q8IXM3 | protein_coding | tolerated(1) | benign(0.047) | TCGA-EO-A22U-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | >=65 | I/II | Unknown | Unknown | SD |
MRPL41 | SNV | Missense_Mutation | novel | c.296N>T | p.Ala99Val | p.A99V | Q8IXM3 | protein_coding | deleterious(0.02) | benign(0.412) | TCGA-EY-A215-01 | Endometrium | uterine corpus endometrioid carcinoma | Female | <65 | I/II | Unknown | Unknown | SD |
MRPL41 | SNV | Missense_Mutation | c.307N>T | p.Asp103Tyr | p.D103Y | Q8IXM3 | protein_coding | deleterious(0) | probably_damaging(1) | TCGA-33-4586-01 | Lung | lung squamous cell carcinoma | Male | <65 | III/IV | Unknown | Unknown | PD | |
MRPL41 | SNV | Missense_Mutation | novel | c.275N>G | p.Phe92Cys | p.F92C | Q8IXM3 | protein_coding | deleterious(0) | probably_damaging(0.993) | TCGA-BA-6868-01 | Oral cavity | head & neck squamous cell carcinoma | Male | <65 | I/II | Chemotherapy | carboplatin | PD |
MRPL41 | SNV | Missense_Mutation | novel | c.358N>C | p.Glu120Gln | p.E120Q | Q8IXM3 | protein_coding | tolerated(0.06) | probably_damaging(0.979) | TCGA-CV-7427-01 | Oral cavity | head & neck squamous cell carcinoma | Female | >=65 | I/II | Unknown | Unknown | PD |
MRPL41 | SNV | Missense_Mutation | rs773179110 | c.169G>A | p.Val57Ile | p.V57I | Q8IXM3 | protein_coding | tolerated(1) | benign(0.047) | TCGA-XK-AAIW-01 | Prostate | prostate adenocarcinoma | Male | >=65 | 9 | Unknown | Unknown | PD |
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Related drugs of malignant transformation related genes |
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(DGIdb 4.0) |
Entrez ID | Symbol | Category | Interaction Types | Drug Claim Name | Drug Name | PMIDs |
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