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Literature curation for genes related to the immune escape mechanisms

Comparsion of the gene expression between the tumor and normal group in TCGA

Comparsion of the gene methylation in promoter regions between the tumor and normal group in TCGA

Comparsion of the gene methylation in genebody regions between the tumor and normal group in TCGA

Summary of the copy number variation across cancer types in TCGA

Differentially expressed genes between mutated and wild type group

Up and down regulated pathways between mutated and wild type group

Comparsion of the gene expression between the non-responders and responders after immunotherapy

Comparsion of the mutation rate between the non-responders and responders after immunotherapy

Spearman correlation between the abundence of TIL and gene expression level

Spearman correlation between the abundence of TIL and copy number

Spearman correlation between the abundence of TIL and methylation level in promoter regions

Spearman correlation between the abundence of TIL and methylation level in genebody regions

The immune subtypes, escaped(-/+), microsatellite instability status and dN/dS of TCGA samples.