|
Fusion gene ID: 9612 |
FusionGeneSummary for DDX41_MBP |
Fusion gene summary |
Fusion gene information | Fusion gene name: DDX41_MBP | Fusion gene ID: 9612 | Hgene | Tgene | Gene symbol | DDX41 | MBP | Gene ID | 51428 | 5553 |
Gene name | DEAD-box helicase 41 | proteoglycan 2, pro eosinophil major basic protein | |
Synonyms | ABS|MPLPF | BMPG|MBP|MBP1|proMBP | |
Cytomap | 5q35.3 | 11q12.1 | |
Type of gene | protein-coding | protein-coding | |
Description | probable ATP-dependent RNA helicase DDX41DEAD (Asp-Glu-Ala-Asp) box polypeptide 41DEAD box protein 41DEAD box protein abstrakt homologDEAD-box protein abstraktputative RNA helicase | bone marrow proteoglycaneosinophil granule major basic proteineosinophil major basic proteinnatural killer cell activatorproteoglycan 2 preproproteinproteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) | |
Modification date | 20180522 | 20180519 | |
UniProtAcc | Q9UJV9 | P02686 | |
Ensembl transtripts involved in fusion gene | ENST00000507955, ENST00000506965, | ENST00000382582, ENST00000355994, ENST00000397875, ENST00000397866, ENST00000397865, ENST00000527041, ENST00000359645, ENST00000528160, ENST00000397869, ENST00000354542, ENST00000526111, ENST00000580402, ENST00000579129, ENST00000578193, ENST00000397863, ENST00000397860, ENST00000487778, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 26 X 20 X 3=1560 |
# samples | 1 | 27 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(27/1560*10)=-2.53051471669878 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: DDX41 [Title/Abstract] AND MBP [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | DA267742 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000507955 | ENST00000382582 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
In-frame | ENST00000507955 | ENST00000355994 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
In-frame | ENST00000507955 | ENST00000397875 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
In-frame | ENST00000507955 | ENST00000397866 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
In-frame | ENST00000507955 | ENST00000397865 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000527041 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000359645 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000528160 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000397869 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000354542 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000526111 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000580402 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000579129 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000578193 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000397863 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000397860 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5CDS-intron | ENST00000507955 | ENST00000487778 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-3CDS | ENST00000506965 | ENST00000382582 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-3CDS | ENST00000506965 | ENST00000355994 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-3CDS | ENST00000506965 | ENST00000397875 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-3CDS | ENST00000506965 | ENST00000397866 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-3CDS | ENST00000506965 | ENST00000397865 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000527041 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000359645 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000528160 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000397869 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000354542 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000526111 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000580402 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000579129 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000578193 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000397863 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000397860 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
5UTR-intron | ENST00000506965 | ENST00000487778 | DDX41 | chr5 | 176943725 | - | MBP | chr18 | 74696851 | - |
Top |
FusionProtFeatures for DDX41_MBP |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DDX41 | MBP |
Probable ATP-dependent RNA helicase. Is required duringpost-transcriptional gene expression. May be involved in pre-mRNAsplicing. {ECO:0000269|PubMed:25920683}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000359645 | - | 3 | 6 | 179_222 | 132 | 187 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000359645 | - | 3 | 6 | 246_256 | 132 | 187 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000382582 | - | 4 | 7 | 179_222 | 143 | 198 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000382582 | - | 4 | 7 | 246_256 | 143 | 198 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397860 | - | 0 | 4 | 179_222 | -72 | 198 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397860 | - | 0 | 4 | 246_256 | -72 | 198 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397863 | - | 0 | 4 | 179_222 | -57 | 198 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397863 | - | 0 | 4 | 246_256 | -57 | 198 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397865 | - | 2 | 5 | 179_222 | 106 | 161 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397865 | - | 2 | 5 | 246_256 | 106 | 161 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397866 | - | 3 | 6 | 179_222 | 117 | 172 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | >MBP | chr5:176943725 | chr18:74696851 | ENST00000397866 | - | 3 | 6 | 246_256 | 117 | 172 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >DDX41 | chr5:176943725 | chr18:74696851 | ENST00000507955 | - | 2 | 17 | 212_396 | 46 | 623 | Domain | Helicase ATP-binding |
Hgene | >DDX41 | chr5:176943725 | chr18:74696851 | ENST00000507955 | - | 2 | 17 | 407_567 | 46 | 623 | Domain | Helicase C-terminal |
Hgene | >DDX41 | chr5:176943725 | chr18:74696851 | ENST00000507955 | - | 2 | 17 | 181_209 | 46 | 623 | Motif | Note=Q motif |
Hgene | >DDX41 | chr5:176943725 | chr18:74696851 | ENST00000507955 | - | 2 | 17 | 344_347 | 46 | 623 | Motif | Note=DEAD box |
Hgene | >DDX41 | chr5:176943725 | chr18:74696851 | ENST00000507955 | - | 2 | 17 | 225_232 | 46 | 623 | Nucleotide binding | ATP |
Hgene | >DDX41 | chr5:176943725 | chr18:74696851 | ENST00000507955 | - | 2 | 17 | 580_597 | 46 | 623 | Zinc finger | Note=CCHC-type |
Tgene | MBP | chr5:176943725 | chr18:74696851 | ENST00000355994 | - | 6 | 9 | 179_222 | 250 | 305 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | MBP | chr5:176943725 | chr18:74696851 | ENST00000355994 | - | 6 | 9 | 246_256 | 250 | 305 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
Tgene | MBP | chr5:176943725 | chr18:74696851 | ENST00000580402 | - | 5 | 8 | 179_222 | 250 | 305 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 1 |
Tgene | MBP | chr5:176943725 | chr18:74696851 | ENST00000580402 | - | 5 | 8 | 246_256 | 250 | 305 | Region | Note=Induces experimental autoimmune encephalomyelitis (EAE) 2 |
Top |
FusionGeneSequence for DDX41_MBP |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000382582_chr18_74696851_-_55aa >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000355994_chr18_74696851_-_55aa >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397875_chr18_74696851_-_55aa >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397866_chr18_74696851_-_55aa >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397865_chr18_74696851_-_55aa |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000382582_chr18_74696851_-_165nt GGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAATCGGCTCACAAGGGATTCAAGGGAGTCGATGCC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000355994_chr18_74696851_-_165nt GGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAATCGGCTCACAAGGGATTCAAGGGAGTCGATGCC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397875_chr18_74696851_-_165nt GGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAATCGGCTCACAAGGGATTCAAGGGAGTCGATGCC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397866_chr18_74696851_-_165nt GGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAATCGGCTCACAAGGGATTCAAGGGAGTCGATGCC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397865_chr18_74696851_-_165nt GGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAATCGGCTCACAAGGGATTCAAGGGAGTCGATGCC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000382582_chr18_74696851_-_2427nt ACACAGGCGCAGTCAGGGAGGCAGGGTGTGTCGAGCGGTTTATCCCGCAACCCCGGCGTCCCCGGCAGGGATGAAAGCGCAGGGCCCACG CGAACTCGGCCCGCAGCTCCCGGCCCTAGAGGACGCACTGTCCGCCGGCAGGGGCGTGCCCAAGACGCCATGCTCTGGGAGAGGTTGGGC ACCTGGCAGGCCGCCCCGACTCCGGATCAGCTGTCTCCGCTGCGTACGTCTTCCTCTTCCAATGGGCTTGGATTGAGCCTTCTAGCGCAT ATTCCAAGTCCTCCAATGTCCCACAATGCCTTGCAGCCGGTTTCGCCCTCGGTCCTGGCAACTGTCGCGTAACCACCCATGAAAGCGTCC ATGCCTCGCCGTGCGATAGTATCTCCGGAACAAATTTGTCCCTCTGCGCGATCCGGAACTCCGAGGTCGTTCCTACGCGCCGTCGTTCGC CTCTTCACATCGGATTGGGTCTCACGCAAGGATGAGGCGGGGTTTCGCCGTGGCGCGCATGCGTGCAGCAAAGAATGGAGGAGTCGGAAC CCGAACGGAAGCGGGCTCGCACCGACGAGGTGCCTGCCGGAGGAAGCCGCTCCGAGGCGGAAGATGAGGACGACGAGGACTACGTGCCCT ATGTGCCGTTACGGCAGCGCCGGCAGCTACTGGGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAAT CGGCTCACAAGGGATTCAAGGGAGTCGATGCCCAGGGCACGCTTTCCAAAATTTTTAAGCTGGGAGGAAGAGATAGTCGCTCTGGATCAC CCATGGCTAGACGCTGAAAACCCACCTGGTTCCGGAATCCTGTCCTCAGCTTCTTAATATAACTGCCTTAAAACTTTAATCCCACTTGCC CCTGTTACCTAATTAGAGCAGATGACCCCTCCCCTAATGCCTGCGGAGTTGTGCACGTAGTAGGGTCAGGCCACGGCAGCCTACCGGCAA TTTCCGGCCAACAGTTAAATGAGAACATGAAAACAGAAAACGGTTAAAACTGTCCCTTTCTGTGTGAAGATCACGTTCCTTCCCCCGCAA TGTGCCCCCAGACGCACGTGGGTCTTCAGGGGGCCAGGTGCACAGACGTCCCTCCACGTTCACCCCTCCACCCTTGGACTTTCTTTTCGC CGTGGCTGCGGCACCCTTGCGCTTTTGCTGGTCACTGCCATGGAGGCACACAGCTGCAGAGACAGAGAGGACGTGGGCGGCAGAGAGGAC TGTTGACATCCAAGCTTCCTTTGTTTTTTTTTCCTGTCCTTCTCTCACCTCCTAAAGTAGACTTCATTTTTCCTAACAGGATTAGACAGT CAAGGAGTGGCTTACTACATGTGGGAGCTTTTGGTATGTGACATGCGGGCTGGGCAGCTGTTAGAGTCCAACGTGGGGCAGCACAGAGAG GGGGCCACCTCCCCAGGCCGTGGCTGCCCACACACCCCAATTAGCTGAATTCGCGTGTGGCAGAGGGAGGAAAAGGAGGCAAACGTGGGC TGGGCAATGGCCTCACATAGGAAACAGGGTCTTCCTGGAGATTTGGTGATGGAGATGTCAAGCAGGTGGCCTCTGGACGTCACCGTTGCC CTGCATGGTGGCCCCAGAGCAGCCTCTATGAACAACCTCGTTTCCAAACCACAGCCCACAGCCGGAGAGTCCAGGAAGACTTGCGCACTC AGAGCAGAAGGGTAGGAGTCCTCTAGACAGCCTCGCAGCCGCGCCAGTCGCCCATAGACACTGGCTGTGACCGGGCGTGCTGGCAGCGGC AGTGCACAGTGGCCAGCACTAACCCTCCCTGAGAAGATAACCGGCTCATTCACTTCCTCCCAGAAGACGCGTGGTAGCGAGTAGGCACAG GCGTGCACCTGCTCCCGAATTACTCACCGAGACACACGGGCTGAGCAGACGGCCCCGTGGATGGAGACAAAGAGCTCTTCTGACCATATC CTTCTTAACACCCGCTGGCATCTCCTTTCGCGCCTCCCTCCCTAACCTACTGACCCACCTTTTGATTTTAGCGCACCTGTGATTGATAGG CCTTCCAAAGAGTCCCACGCTGGCATCACCCTCCCCGAGGACGGAGATGAGGAGTAGTCAGCGTGATGCCAAAACGCGTCTTCTTAATCC AATTCTAATTCTGAATGTTTCGTGTGGGCTTAATACCATGTCTATTAATATATAGCCTCGATGATGAGAGAGTTACAAAGAACAAAACTC CAGACACAAACCTCCAAATTTTTCAGCAGAAGCACTCTGCGTCGCTGAGCTGAGGTCGGCTCTGCGATCCATACGTGGCCGCACCCACAC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000355994_chr18_74696851_-_2420nt ACACAGGCGCAGTCAGGGAGGCAGGGTGTGTCGAGCGGTTTATCCCGCAACCCCGGCGTCCCCGGCAGGGATGAAAGCGCAGGGCCCACG CGAACTCGGCCCGCAGCTCCCGGCCCTAGAGGACGCACTGTCCGCCGGCAGGGGCGTGCCCAAGACGCCATGCTCTGGGAGAGGTTGGGC ACCTGGCAGGCCGCCCCGACTCCGGATCAGCTGTCTCCGCTGCGTACGTCTTCCTCTTCCAATGGGCTTGGATTGAGCCTTCTAGCGCAT ATTCCAAGTCCTCCAATGTCCCACAATGCCTTGCAGCCGGTTTCGCCCTCGGTCCTGGCAACTGTCGCGTAACCACCCATGAAAGCGTCC ATGCCTCGCCGTGCGATAGTATCTCCGGAACAAATTTGTCCCTCTGCGCGATCCGGAACTCCGAGGTCGTTCCTACGCGCCGTCGTTCGC CTCTTCACATCGGATTGGGTCTCACGCAAGGATGAGGCGGGGTTTCGCCGTGGCGCGCATGCGTGCAGCAAAGAATGGAGGAGTCGGAAC CCGAACGGAAGCGGGCTCGCACCGACGAGGTGCCTGCCGGAGGAAGCCGCTCCGAGGCGGAAGATGAGGACGACGAGGACTACGTGCCCT ATGTGCCGTTACGGCAGCGCCGGCAGCTACTGGGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAAT CGGCTCACAAGGGATTCAAGGGAGTCGATGCCCAGGGCACGCTTTCCAAAATTTTTAAGCTGGGAGGAAGAGATAGTCGCTCTGGATCAC CCATGGCTAGACGCTGAAAACCCACCTGGTTCCGGAATCCTGTCCTCAGCTTCTTAATATAACTGCCTTAAAACTTTAATCCCACTTGCC CCTGTTACCTAATTAGAGCAGATGACCCCTCCCCTAATGCCTGCGGAGTTGTGCACGTAGTAGGGTCAGGCCACGGCAGCCTACCGGCAA TTTCCGGCCAACAGTTAAATGAGAACATGAAAACAGAAAACGGTTAAAACTGTCCCTTTCTGTGTGAAGATCACGTTCCTTCCCCCGCAA TGTGCCCCCAGACGCACGTGGGTCTTCAGGGGGCCAGGTGCACAGACGTCCCTCCACGTTCACCCCTCCACCCTTGGACTTTCTTTTCGC CGTGGCTGCGGCACCCTTGCGCTTTTGCTGGTCACTGCCATGGAGGCACACAGCTGCAGAGACAGAGAGGACGTGGGCGGCAGAGAGGAC TGTTGACATCCAAGCTTCCTTTGTTTTTTTTTCCTGTCCTTCTCTCACCTCCTAAAGTAGACTTCATTTTTCCTAACAGGATTAGACAGT CAAGGAGTGGCTTACTACATGTGGGAGCTTTTGGTATGTGACATGCGGGCTGGGCAGCTGTTAGAGTCCAACGTGGGGCAGCACAGAGAG GGGGCCACCTCCCCAGGCCGTGGCTGCCCACACACCCCAATTAGCTGAATTCGCGTGTGGCAGAGGGAGGAAAAGGAGGCAAACGTGGGC TGGGCAATGGCCTCACATAGGAAACAGGGTCTTCCTGGAGATTTGGTGATGGAGATGTCAAGCAGGTGGCCTCTGGACGTCACCGTTGCC CTGCATGGTGGCCCCAGAGCAGCCTCTATGAACAACCTCGTTTCCAAACCACAGCCCACAGCCGGAGAGTCCAGGAAGACTTGCGCACTC AGAGCAGAAGGGTAGGAGTCCTCTAGACAGCCTCGCAGCCGCGCCAGTCGCCCATAGACACTGGCTGTGACCGGGCGTGCTGGCAGCGGC AGTGCACAGTGGCCAGCACTAACCCTCCCTGAGAAGATAACCGGCTCATTCACTTCCTCCCAGAAGACGCGTGGTAGCGAGTAGGCACAG GCGTGCACCTGCTCCCGAATTACTCACCGAGACACACGGGCTGAGCAGACGGCCCCGTGGATGGAGACAAAGAGCTCTTCTGACCATATC CTTCTTAACACCCGCTGGCATCTCCTTTCGCGCCTCCCTCCCTAACCTACTGACCCACCTTTTGATTTTAGCGCACCTGTGATTGATAGG CCTTCCAAAGAGTCCCACGCTGGCATCACCCTCCCCGAGGACGGAGATGAGGAGTAGTCAGCGTGATGCCAAAACGCGTCTTCTTAATCC AATTCTAATTCTGAATGTTTCGTGTGGGCTTAATACCATGTCTATTAATATATAGCCTCGATGATGAGAGAGTTACAAAGAACAAAACTC CAGACACAAACCTCCAAATTTTTCAGCAGAAGCACTCTGCGTCGCTGAGCTGAGGTCGGCTCTGCGATCCATACGTGGCCGCACCCACAC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397875_chr18_74696851_-_2402nt ACACAGGCGCAGTCAGGGAGGCAGGGTGTGTCGAGCGGTTTATCCCGCAACCCCGGCGTCCCCGGCAGGGATGAAAGCGCAGGGCCCACG CGAACTCGGCCCGCAGCTCCCGGCCCTAGAGGACGCACTGTCCGCCGGCAGGGGCGTGCCCAAGACGCCATGCTCTGGGAGAGGTTGGGC ACCTGGCAGGCCGCCCCGACTCCGGATCAGCTGTCTCCGCTGCGTACGTCTTCCTCTTCCAATGGGCTTGGATTGAGCCTTCTAGCGCAT ATTCCAAGTCCTCCAATGTCCCACAATGCCTTGCAGCCGGTTTCGCCCTCGGTCCTGGCAACTGTCGCGTAACCACCCATGAAAGCGTCC ATGCCTCGCCGTGCGATAGTATCTCCGGAACAAATTTGTCCCTCTGCGCGATCCGGAACTCCGAGGTCGTTCCTACGCGCCGTCGTTCGC CTCTTCACATCGGATTGGGTCTCACGCAAGGATGAGGCGGGGTTTCGCCGTGGCGCGCATGCGTGCAGCAAAGAATGGAGGAGTCGGAAC CCGAACGGAAGCGGGCTCGCACCGACGAGGTGCCTGCCGGAGGAAGCCGCTCCGAGGCGGAAGATGAGGACGACGAGGACTACGTGCCCT ATGTGCCGTTACGGCAGCGCCGGCAGCTACTGGGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAAT CGGCTCACAAGGGATTCAAGGGAGTCGATGCCCAGGGCACGCTTTCCAAAATTTTTAAGCTGGGAGGAAGAGATAGTCGCTCTGGATCAC CCATGGCTAGACGCTGAAAACCCACCTGGTTCCGGAATCCTGTCCTCAGCTTCTTAATATAACTGCCTTAAAACTTTAATCCCACTTGCC CCTGTTACCTAATTAGAGCAGATGACCCCTCCCCTAATGCCTGCGGAGTTGTGCACGTAGTAGGGTCAGGCCACGGCAGCCTACCGGCAA TTTCCGGCCAACAGTTAAATGAGAACATGAAAACAGAAAACGGTTAAAACTGTCCCTTTCTGTGTGAAGATCACGTTCCTTCCCCCGCAA TGTGCCCCCAGACGCACGTGGGTCTTCAGGGGGCCAGGTGCACAGACGTCCCTCCACGTTCACCCCTCCACCCTTGGACTTTCTTTTCGC CGTGGCTGCGGCACCCTTGCGCTTTTGCTGGTCACTGCCATGGAGGCACACAGCTGCAGAGACAGAGAGGACGTGGGCGGCAGAGAGGAC TGTTGACATCCAAGCTTCCTTTGTTTTTTTTTCCTGTCCTTCTCTCACCTCCTAAAGTAGACTTCATTTTTCCTAACAGGATTAGACAGT CAAGGAGTGGCTTACTACATGTGGGAGCTTTTGGTATGTGACATGCGGGCTGGGCAGCTGTTAGAGTCCAACGTGGGGCAGCACAGAGAG GGGGCCACCTCCCCAGGCCGTGGCTGCCCACACACCCCAATTAGCTGAATTCGCGTGTGGCAGAGGGAGGAAAAGGAGGCAAACGTGGGC TGGGCAATGGCCTCACATAGGAAACAGGGTCTTCCTGGAGATTTGGTGATGGAGATGTCAAGCAGGTGGCCTCTGGACGTCACCGTTGCC CTGCATGGTGGCCCCAGAGCAGCCTCTATGAACAACCTCGTTTCCAAACCACAGCCCACAGCCGGAGAGTCCAGGAAGACTTGCGCACTC AGAGCAGAAGGGTAGGAGTCCTCTAGACAGCCTCGCAGCCGCGCCAGTCGCCCATAGACACTGGCTGTGACCGGGCGTGCTGGCAGCGGC AGTGCACAGTGGCCAGCACTAACCCTCCCTGAGAAGATAACCGGCTCATTCACTTCCTCCCAGAAGACGCGTGGTAGCGAGTAGGCACAG GCGTGCACCTGCTCCCGAATTACTCACCGAGACACACGGGCTGAGCAGACGGCCCCGTGGATGGAGACAAAGAGCTCTTCTGACCATATC CTTCTTAACACCCGCTGGCATCTCCTTTCGCGCCTCCCTCCCTAACCTACTGACCCACCTTTTGATTTTAGCGCACCTGTGATTGATAGG CCTTCCAAAGAGTCCCACGCTGGCATCACCCTCCCCGAGGACGGAGATGAGGAGTAGTCAGCGTGATGCCAAAACGCGTCTTCTTAATCC AATTCTAATTCTGAATGTTTCGTGTGGGCTTAATACCATGTCTATTAATATATAGCCTCGATGATGAGAGAGTTACAAAGAACAAAACTC CAGACACAAACCTCCAAATTTTTCAGCAGAAGCACTCTGCGTCGCTGAGCTGAGGTCGGCTCTGCGATCCATACGTGGCCGCACCCACAC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397866_chr18_74696851_-_2402nt ACACAGGCGCAGTCAGGGAGGCAGGGTGTGTCGAGCGGTTTATCCCGCAACCCCGGCGTCCCCGGCAGGGATGAAAGCGCAGGGCCCACG CGAACTCGGCCCGCAGCTCCCGGCCCTAGAGGACGCACTGTCCGCCGGCAGGGGCGTGCCCAAGACGCCATGCTCTGGGAGAGGTTGGGC ACCTGGCAGGCCGCCCCGACTCCGGATCAGCTGTCTCCGCTGCGTACGTCTTCCTCTTCCAATGGGCTTGGATTGAGCCTTCTAGCGCAT ATTCCAAGTCCTCCAATGTCCCACAATGCCTTGCAGCCGGTTTCGCCCTCGGTCCTGGCAACTGTCGCGTAACCACCCATGAAAGCGTCC ATGCCTCGCCGTGCGATAGTATCTCCGGAACAAATTTGTCCCTCTGCGCGATCCGGAACTCCGAGGTCGTTCCTACGCGCCGTCGTTCGC CTCTTCACATCGGATTGGGTCTCACGCAAGGATGAGGCGGGGTTTCGCCGTGGCGCGCATGCGTGCAGCAAAGAATGGAGGAGTCGGAAC CCGAACGGAAGCGGGCTCGCACCGACGAGGTGCCTGCCGGAGGAAGCCGCTCCGAGGCGGAAGATGAGGACGACGAGGACTACGTGCCCT ATGTGCCGTTACGGCAGCGCCGGCAGCTACTGGGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAAT CGGCTCACAAGGGATTCAAGGGAGTCGATGCCCAGGGCACGCTTTCCAAAATTTTTAAGCTGGGAGGAAGAGATAGTCGCTCTGGATCAC CCATGGCTAGACGCTGAAAACCCACCTGGTTCCGGAATCCTGTCCTCAGCTTCTTAATATAACTGCCTTAAAACTTTAATCCCACTTGCC CCTGTTACCTAATTAGAGCAGATGACCCCTCCCCTAATGCCTGCGGAGTTGTGCACGTAGTAGGGTCAGGCCACGGCAGCCTACCGGCAA TTTCCGGCCAACAGTTAAATGAGAACATGAAAACAGAAAACGGTTAAAACTGTCCCTTTCTGTGTGAAGATCACGTTCCTTCCCCCGCAA TGTGCCCCCAGACGCACGTGGGTCTTCAGGGGGCCAGGTGCACAGACGTCCCTCCACGTTCACCCCTCCACCCTTGGACTTTCTTTTCGC CGTGGCTGCGGCACCCTTGCGCTTTTGCTGGTCACTGCCATGGAGGCACACAGCTGCAGAGACAGAGAGGACGTGGGCGGCAGAGAGGAC TGTTGACATCCAAGCTTCCTTTGTTTTTTTTTCCTGTCCTTCTCTCACCTCCTAAAGTAGACTTCATTTTTCCTAACAGGATTAGACAGT CAAGGAGTGGCTTACTACATGTGGGAGCTTTTGGTATGTGACATGCGGGCTGGGCAGCTGTTAGAGTCCAACGTGGGGCAGCACAGAGAG GGGGCCACCTCCCCAGGCCGTGGCTGCCCACACACCCCAATTAGCTGAATTCGCGTGTGGCAGAGGGAGGAAAAGGAGGCAAACGTGGGC TGGGCAATGGCCTCACATAGGAAACAGGGTCTTCCTGGAGATTTGGTGATGGAGATGTCAAGCAGGTGGCCTCTGGACGTCACCGTTGCC CTGCATGGTGGCCCCAGAGCAGCCTCTATGAACAACCTCGTTTCCAAACCACAGCCCACAGCCGGAGAGTCCAGGAAGACTTGCGCACTC AGAGCAGAAGGGTAGGAGTCCTCTAGACAGCCTCGCAGCCGCGCCAGTCGCCCATAGACACTGGCTGTGACCGGGCGTGCTGGCAGCGGC AGTGCACAGTGGCCAGCACTAACCCTCCCTGAGAAGATAACCGGCTCATTCACTTCCTCCCAGAAGACGCGTGGTAGCGAGTAGGCACAG GCGTGCACCTGCTCCCGAATTACTCACCGAGACACACGGGCTGAGCAGACGGCCCCGTGGATGGAGACAAAGAGCTCTTCTGACCATATC CTTCTTAACACCCGCTGGCATCTCCTTTCGCGCCTCCCTCCCTAACCTACTGACCCACCTTTTGATTTTAGCGCACCTGTGATTGATAGG CCTTCCAAAGAGTCCCACGCTGGCATCACCCTCCCCGAGGACGGAGATGAGGAGTAGTCAGCGTGATGCCAAAACGCGTCTTCTTAATCC AATTCTAATTCTGAATGTTTCGTGTGGGCTTAATACCATGTCTATTAATATATAGCCTCGATGATGAGAGAGTTACAAAGAACAAAACTC CAGACACAAACCTCCAAATTTTTCAGCAGAAGCACTCTGCGTCGCTGAGCTGAGGTCGGCTCTGCGATCCATACGTGGCCGCACCCACAC >In-frame_DDX41_ENST00000507955_chr5_176943725_-_MBP_ENST00000397865_chr18_74696851_-_2393nt ACACAGGCGCAGTCAGGGAGGCAGGGTGTGTCGAGCGGTTTATCCCGCAACCCCGGCGTCCCCGGCAGGGATGAAAGCGCAGGGCCCACG CGAACTCGGCCCGCAGCTCCCGGCCCTAGAGGACGCACTGTCCGCCGGCAGGGGCGTGCCCAAGACGCCATGCTCTGGGAGAGGTTGGGC ACCTGGCAGGCCGCCCCGACTCCGGATCAGCTGTCTCCGCTGCGTACGTCTTCCTCTTCCAATGGGCTTGGATTGAGCCTTCTAGCGCAT ATTCCAAGTCCTCCAATGTCCCACAATGCCTTGCAGCCGGTTTCGCCCTCGGTCCTGGCAACTGTCGCGTAACCACCCATGAAAGCGTCC ATGCCTCGCCGTGCGATAGTATCTCCGGAACAAATTTGTCCCTCTGCGCGATCCGGAACTCCGAGGTCGTTCCTACGCGCCGTCGTTCGC CTCTTCACATCGGATTGGGTCTCACGCAAGGATGAGGCGGGGTTTCGCCGTGGCGCGCATGCGTGCAGCAAAGAATGGAGGAGTCGGAAC CCGAACGGAAGCGGGCTCGCACCGACGAGGTGCCTGCCGGAGGAAGCCGCTCCGAGGCGGAAGATGAGGACGACGAGGACTACGTGCCCT ATGTGCCGTTACGGCAGCGCCGGCAGCTACTGGGGGCCGAAGGCCAGAGACCAGGATTTGGCTACGGAGGCAGAGCGTCCGACTATAAAT CGGCTCACAAGGGATTCAAGGGAGTCGATGCCCAGGGCACGCTTTCCAAAATTTTTAAGCTGGGAGGAAGAGATAGTCGCTCTGGATCAC CCATGGCTAGACGCTGAAAACCCACCTGGTTCCGGAATCCTGTCCTCAGCTTCTTAATATAACTGCCTTAAAACTTTAATCCCACTTGCC CCTGTTACCTAATTAGAGCAGATGACCCCTCCCCTAATGCCTGCGGAGTTGTGCACGTAGTAGGGTCAGGCCACGGCAGCCTACCGGCAA TTTCCGGCCAACAGTTAAATGAGAACATGAAAACAGAAAACGGTTAAAACTGTCCCTTTCTGTGTGAAGATCACGTTCCTTCCCCCGCAA TGTGCCCCCAGACGCACGTGGGTCTTCAGGGGGCCAGGTGCACAGACGTCCCTCCACGTTCACCCCTCCACCCTTGGACTTTCTTTTCGC CGTGGCTGCGGCACCCTTGCGCTTTTGCTGGTCACTGCCATGGAGGCACACAGCTGCAGAGACAGAGAGGACGTGGGCGGCAGAGAGGAC TGTTGACATCCAAGCTTCCTTTGTTTTTTTTTCCTGTCCTTCTCTCACCTCCTAAAGTAGACTTCATTTTTCCTAACAGGATTAGACAGT CAAGGAGTGGCTTACTACATGTGGGAGCTTTTGGTATGTGACATGCGGGCTGGGCAGCTGTTAGAGTCCAACGTGGGGCAGCACAGAGAG GGGGCCACCTCCCCAGGCCGTGGCTGCCCACACACCCCAATTAGCTGAATTCGCGTGTGGCAGAGGGAGGAAAAGGAGGCAAACGTGGGC TGGGCAATGGCCTCACATAGGAAACAGGGTCTTCCTGGAGATTTGGTGATGGAGATGTCAAGCAGGTGGCCTCTGGACGTCACCGTTGCC CTGCATGGTGGCCCCAGAGCAGCCTCTATGAACAACCTCGTTTCCAAACCACAGCCCACAGCCGGAGAGTCCAGGAAGACTTGCGCACTC AGAGCAGAAGGGTAGGAGTCCTCTAGACAGCCTCGCAGCCGCGCCAGTCGCCCATAGACACTGGCTGTGACCGGGCGTGCTGGCAGCGGC AGTGCACAGTGGCCAGCACTAACCCTCCCTGAGAAGATAACCGGCTCATTCACTTCCTCCCAGAAGACGCGTGGTAGCGAGTAGGCACAG GCGTGCACCTGCTCCCGAATTACTCACCGAGACACACGGGCTGAGCAGACGGCCCCGTGGATGGAGACAAAGAGCTCTTCTGACCATATC CTTCTTAACACCCGCTGGCATCTCCTTTCGCGCCTCCCTCCCTAACCTACTGACCCACCTTTTGATTTTAGCGCACCTGTGATTGATAGG CCTTCCAAAGAGTCCCACGCTGGCATCACCCTCCCCGAGGACGGAGATGAGGAGTAGTCAGCGTGATGCCAAAACGCGTCTTCTTAATCC AATTCTAATTCTGAATGTTTCGTGTGGGCTTAATACCATGTCTATTAATATATAGCCTCGATGATGAGAGAGTTACAAAGAACAAAACTC CAGACACAAACCTCCAAATTTTTCAGCAGAAGCACTCTGCGTCGCTGAGCTGAGGTCGGCTCTGCGATCCATACGTGGCCGCACCCACAC |
Top |
FusionGenePPI for DDX41_MBP |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
DDX41 | RNPS1, USP36, CHAF1A, CUL3, NKAP, HDAC6, LIN28A, CEP250, SIAH1, CEP70, SHMT2, MOV10, NXF1, OBSL1, NTRK1, CLVS2, PITRM1, DVL2, TBC1D9, SNW1, CDC5L, ANKRD50, CSNK2A1, NOS1AP, PNN, CSNK2A2, SIN3A, SRRM2, BRMS1L, CBY1, NCL | MBP | TRPM7, PRMT5, STK39, HLA-DRA, PLP1, TSSK6, IRAK4, PRKCA, PRKCI, PRKCZ, PPP2R5C, LIMK1, LIMK2, TBK1, IKBKE, STK3, APTX, ATN1, ATXN1, MAPK14, LRRK2, PRKDC, MAPK12, MAPK11, MAPK13, MAPK3, MAPK1, CDK1, CDK5, MAP3K5, TLK1, RPS6KA6, DDX58, MELK, CDK7, CDK8, CDK9, HIPK2, SQSTM1, PKN1, ULK1, PRKCB, MAP3K3, CTDSP1, ABL1, MUS81, RPS6KA5, MYH6, MAP3K1, MAPK8, CTDSPL, NLN, IDE, PTPRA, PRKCD |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for DDX41_MBP |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for DDX41_MBP |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | DDX41 | C4225174 | MYELOPROLIFERATIVE/LYMPHOPROLIFERATIVE NEOPLASMS, FAMILIAL (MULTIPLE TYPES), SUSCEPTIBILITY TO | 1 | UNIPROT |
Tgene | MBP | C0036341 | Schizophrenia | 4 | PSYGENET |
Tgene | MBP | C0014072 | Experimental Autoimmune Encephalomyelitis | 3 | CTD_human |
Tgene | MBP | C0001973 | Alcoholic Intoxication, Chronic | 1 | PSYGENET |
Tgene | MBP | C0011303 | Demyelinating Diseases | 1 | CTD_human |
Tgene | MBP | C0027873 | Neuromyelitis Optica | 1 | CTD_human |