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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 934

FusionGeneSummary for ADORA2B_TIMP3

check button Fusion gene summary
Fusion gene informationFusion gene name: ADORA2B_TIMP3
Fusion gene ID: 934
HgeneTgene
Gene symbol

ADORA2B

TIMP3

Gene ID

136

7078

Gene nameadenosine A2b receptorTIMP metallopeptidase inhibitor 3
SynonymsADORA2HSMRK222|K222|K222TA2|SFD
Cytomap

17p12

22q12.3

Type of geneprotein-codingprotein-coding
Descriptionadenosine receptor A2bmetalloproteinase inhibitor 3MIG-5 proteinTIMP-3protein MIG-5tissue inhibitor of metalloproteinases 3
Modification date2018051920180527
UniProtAcc

P29275

P35625

Ensembl transtripts involved in fusion geneENST00000304222, ENST00000266085, 
Fusion gene scores* DoF score3 X 1 X 1=31 X 1 X 1=1
# samples 21
** MAII scorelog2(2/3*10)=2.73696559416621log2(1/1*10)=3.32192809488736
Context

PubMed: ADORA2B [Title/Abstract] AND TIMP3 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBLCATCGA-FD-A3B6-01AADORA2Bchr17

15848897

+TIMP3chr22

33197755

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000304222ENST00000266085ADORA2Bchr17

15848897

+TIMP3chr22

33197755

+

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FusionProtFeatures for ADORA2B_TIMP3


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ADORA2B

P29275

TIMP3

P35625

Receptor for adenosine. The activity of this receptor ismediated by G proteins which activate adenylyl cyclase. Complexes with metalloproteinases (such as collagenases)and irreversibly inactivates them by binding to their catalyticzinc cofactor. May form part of a tissue-specific acute responseto remodeling stimuli. Known to act on MMP-1, MMP-2, MMP-3, MMP-7,MMP-9, MMP-13, MMP-14 and MMP-15.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for ADORA2B_TIMP3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for ADORA2B_TIMP3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
ADORA2BSLC9A3R2, EZR, TPD52L2, ZNF267TIMP3MMP2, ADAM17, AGTR2, COLEC11, ASGR2, TIMP2, COLEC10, MMP3, IFI30, NELL1, CRP, ADPGK, KLRG2, APP, CSN1S1, VWCE, DKK3, FAM136A, IGFBP1, DEFA1


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for ADORA2B_TIMP3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
HgeneADORA2BP29275DB00277TheophyllineAdenosine receptor A2bsmall moleculeapproved
HgeneADORA2BP29275DB00640AdenosineAdenosine receptor A2bsmall moleculeapproved|investigational
HgeneADORA2BP29275DB04932DefibrotideAdenosine receptor A2bbiotechapproved|investigational

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RelatedDiseases for ADORA2B_TIMP3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneADORA2BC0027627Neoplasm Metastasis1CTD_human
TgeneTIMP3C1850938FUNDUS DYSTROPHY, PSEUDOINFLAMMATORY, OF SORSBY5CTD_human;ORPHANET;UNIPROT
TgeneTIMP3C0000786Spontaneous abortion1CTD_human
TgeneTIMP3C0004096Asthma1CTD_human
TgeneTIMP3C0005686Urinary Bladder Diseases1CTD_human
TgeneTIMP3C0009319Colitis1CTD_human
TgeneTIMP3C0023895Liver diseases1CTD_human
TgeneTIMP3C0027626Neoplasm Invasiveness1CTD_human
TgeneTIMP3C0036323Schistosomiasis1CTD_human
TgeneTIMP3C0038356Stomach Neoplasms1CTD_human
TgeneTIMP3C0235032Neurotoxicity Syndromes1CTD_human
TgeneTIMP3C0242383Age related macular degeneration1CTD_human