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Fusion gene ID: 9018 |
FusionGeneSummary for CUX1_MTMR7 |
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Fusion gene information | Fusion gene name: CUX1_MTMR7 | Fusion gene ID: 9018 | Hgene | Tgene | Gene symbol | CUX1 | MTMR7 | Gene ID | 1523 | 9108 |
Gene name | cut like homeobox 1 | myotubularin related protein 7 | |
Synonyms | CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75 | - | |
Cytomap | 7q22.1 | 8p22 | |
Type of gene | protein-coding | protein-coding | |
Description | protein CASPCCAAT displacement proteincut homologgolgi integral membrane protein 6homeobox protein cux-1putative protein product of Nbla10317 | myotubularin-related protein 7 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q13948 | Q9Y216 | |
Ensembl transtripts involved in fusion gene | ENST00000437600, ENST00000292538, ENST00000393824, ENST00000547394, ENST00000360264, ENST00000425244, ENST00000292535, ENST00000549414, ENST00000556210, ENST00000550008, ENST00000546411, ENST00000560541, | ENST00000180173, ENST00000521857, ENST00000398099, ENST00000523571, | |
Fusion gene scores | * DoF score | 20 X 18 X 9=3240 | 2 X 2 X 1=4 |
# samples | 22 | 2 | |
** MAII score | log2(22/3240*10)=-3.88041838424733 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/4*10)=2.32192809488736 | |
Context | PubMed: CUX1 [Title/Abstract] AND MTMR7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | AI732560 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000437600 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000437600 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000437600 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000437600 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292538 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292538 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292538 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292538 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000393824 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000393824 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000393824 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000393824 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000547394 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000547394 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000547394 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000547394 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000360264 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000360264 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000360264 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000360264 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000425244 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000425244 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000425244 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000425244 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292535 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292535 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292535 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000292535 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000549414 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000549414 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000549414 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000549414 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000556210 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000556210 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000556210 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000556210 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000550008 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000550008 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000550008 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000550008 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000546411 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000546411 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000546411 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000546411 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000560541 | ENST00000180173 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000560541 | ENST00000521857 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000560541 | ENST00000398099 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
intron-intron | ENST00000560541 | ENST00000523571 | CUX1 | chr7 | 101525434 | - | MTMR7 | chr8 | 17262344 | - |
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FusionProtFeatures for CUX1_MTMR7 |
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Hgene | Tgene |
CUX1 | MTMR7 |
May be involved in intra-Golgi retrograde transport.{ECO:0000269|PubMed:15718469}. | Phosphatase that acts on lipids with a phosphoinositolheadgroup. {ECO:0000305}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for CUX1_MTMR7 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for CUX1_MTMR7 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CUX1_MTMR7 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CUX1_MTMR7 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CUX1 | C0041696 | Unipolar Depression | 3 | PSYGENET |
Hgene | CUX1 | C1269683 | Major Depressive Disorder | 3 | PSYGENET |
Hgene | CUX1 | C0525045 | Mood Disorders | 1 | PSYGENET |
Hgene | CUX1 | C0596263 | Carcinogenesis | 1 | CTD_human |
Tgene | MTMR7 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |