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Fusion gene ID: 8508 |
FusionGeneSummary for CRLS1_NFX1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CRLS1_NFX1 | Fusion gene ID: 8508 | Hgene | Tgene | Gene symbol | CRLS1 | NFX1 | Gene ID | 54675 | 4799 |
| Gene name | cardiolipin synthase 1 | nuclear transcription factor, X-box binding 1 | |
| Synonyms | C20orf155|CLS|CLS1|GCD10|dJ967N21.6 | NFX2|TEG-42|Tex42 | |
| Cytomap | 20p12.3 | 9p13.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | cardiolipin synthase (CMP-forming) | transcriptional repressor NF-X1nuclear transcription factor, X box-binding protein 1 | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q9UJA2 | Q12986 | |
| Ensembl transtripts involved in fusion gene | ENST00000378863, ENST00000452938, ENST00000378868, ENST00000464921, | ENST00000379540, ENST00000379521, ENST00000318524, ENST00000463421, | |
| Fusion gene scores | * DoF score | 6 X 6 X 5=180 | 9 X 8 X 5=360 |
| # samples | 6 | 9 | |
| ** MAII score | log2(6/180*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/360*10)=-2 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CRLS1 [Title/Abstract] AND NFX1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | NFX1 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 7964459 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | KIRC | TCGA-BP-5199-01A | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000378863 | ENST00000379540 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000378863 | ENST00000379521 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000378863 | ENST00000318524 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| 5CDS-intron | ENST00000378863 | ENST00000463421 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000452938 | ENST00000379540 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000452938 | ENST00000379521 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000452938 | ENST00000318524 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| 5CDS-intron | ENST00000452938 | ENST00000463421 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000378868 | ENST00000379540 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000378868 | ENST00000379521 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| In-frame | ENST00000378868 | ENST00000318524 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| 5CDS-intron | ENST00000378868 | ENST00000463421 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| intron-3CDS | ENST00000464921 | ENST00000379540 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| intron-3CDS | ENST00000464921 | ENST00000379521 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| intron-3CDS | ENST00000464921 | ENST00000318524 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
| intron-intron | ENST00000464921 | ENST00000463421 | CRLS1 | chr20 | 5996136 | + | NFX1 | chr9 | 33328579 | + |
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FusionProtFeatures for CRLS1_NFX1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CRLS1 | NFX1 |
| Catalyzes the synthesis of cardiolipin (CL)(diphosphatidylglycerol) by specifically transferring aphosphatidyl group from CDP-diacylglycerol to phosphatidylglycerol(PG). CL is a key phospholipid in mitochondrial membranes andplays important roles in maintaining the functional integrity anddynamics of mitochondria under both optimal and stress conditions.{ECO:0000269|PubMed:16547353, ECO:0000269|PubMed:16678169}. | Binds to the X-box motif of MHC class II genes andrepresses their expression. May play an important role inregulating the duration of an inflammatory response by limitingthe period in which MHC class II molecules are induced byinterferon-gamma. Isoform 3 binds to the X-box motif of TERTpromoter and represses its expression. Together with PABPC1 orPABPC4, isoform 1 acts as a coactivator for TERT expression.Mediates E2-dependent ubiquitination.{ECO:0000269|PubMed:10500182, ECO:0000269|PubMed:15371341,ECO:0000269|PubMed:17267499}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378863 | + | 3 | 7 | 109_129 | 191 | 302 | Transmembrane | Helical |
| Hgene | CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378863 | + | 3 | 7 | 133_153 | 191 | 302 | Transmembrane | Helical |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 1084_1089 | 635 | 834 | Compositional bias | Note=Poly-Pro |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 1084_1089 | 635 | 1025 | Compositional bias | Note=Poly-Pro |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 1084_1089 | 635 | 1121 | Compositional bias | Note=Poly-Pro |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 994_1062 | 635 | 834 | Domain | R3H |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 994_1062 | 635 | 1025 | Domain | R3H |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 994_1062 | 635 | 1121 | Domain | R3H |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 632_655 | 635 | 834 | Zinc finger | Note=NF-X1-type 4 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 694_713 | 635 | 834 | Zinc finger | Note=NF-X1-type 5 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 721_740 | 635 | 834 | Zinc finger | Note=NF-X1-type 6 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 832_854 | 635 | 834 | Zinc finger | Note=NF-X1-type 7 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 863_884 | 635 | 834 | Zinc finger | Note=NF-X1-type 8 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 632_655 | 635 | 1025 | Zinc finger | Note=NF-X1-type 4 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 694_713 | 635 | 1025 | Zinc finger | Note=NF-X1-type 5 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 721_740 | 635 | 1025 | Zinc finger | Note=NF-X1-type 6 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 832_854 | 635 | 1025 | Zinc finger | Note=NF-X1-type 7 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 863_884 | 635 | 1025 | Zinc finger | Note=NF-X1-type 8 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 632_655 | 635 | 1121 | Zinc finger | Note=NF-X1-type 4 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 694_713 | 635 | 1121 | Zinc finger | Note=NF-X1-type 5 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 721_740 | 635 | 1121 | Zinc finger | Note=NF-X1-type 6 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 832_854 | 635 | 1121 | Zinc finger | Note=NF-X1-type 7 |
| Tgene | >NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 863_884 | 635 | 1121 | Zinc finger | Note=NF-X1-type 8 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378863 | + | 3 | 7 | 190_212 | 191 | 302 | Transmembrane | Helical |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378863 | + | 3 | 7 | 250_270 | 191 | 302 | Transmembrane | Helical |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378863 | + | 3 | 7 | 272_292 | 191 | 302 | Transmembrane | Helical |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378868 | + | 3 | 7 | 109_129 | 92 | 203 | Transmembrane | Helical |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378868 | + | 3 | 7 | 133_153 | 92 | 203 | Transmembrane | Helical |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378868 | + | 3 | 7 | 190_212 | 92 | 203 | Transmembrane | Helical |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378868 | + | 3 | 7 | 250_270 | 92 | 203 | Transmembrane | Helical |
| Hgene | >CRLS1 | chr20:5996136 | chr9:33328579 | ENST00000378868 | + | 3 | 7 | 272_292 | 92 | 203 | Transmembrane | Helical |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 358_409 | 635 | 834 | Zinc finger | RING-type%3B atypical |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 453_471 | 635 | 834 | Zinc finger | Note=NF-X1-type 1 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 506_525 | 635 | 834 | Zinc finger | Note=NF-X1-type 2 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 567_586 | 635 | 834 | Zinc finger | Note=NF-X1-type 3 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 358_409 | 635 | 1025 | Zinc finger | RING-type%3B atypical |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 453_471 | 635 | 1025 | Zinc finger | Note=NF-X1-type 1 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 506_525 | 635 | 1025 | Zinc finger | Note=NF-X1-type 2 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 567_586 | 635 | 1025 | Zinc finger | Note=NF-X1-type 3 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 358_409 | 635 | 1121 | Zinc finger | RING-type%3B atypical |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 453_471 | 635 | 1121 | Zinc finger | Note=NF-X1-type 1 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 506_525 | 635 | 1121 | Zinc finger | Note=NF-X1-type 2 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 567_586 | 635 | 1121 | Zinc finger | Note=NF-X1-type 3 |
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FusionGeneSequence for CRLS1_NFX1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_677aa MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAP GGQWGPASTPSLYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL YVSLTYADLIPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLI CGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCM GKHEFRSNIPCHLVDISCGLPCSATLPCGMHKCQRLCHKGECLVDEPCKQPCTTPRADCGHPCMAPCHTSSPCPVTACKAKVELQCECGR RKEMVICSEASSTYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARLECDEECSALERKKRLAEAFHISEDSDPFNIRSSGSKFSD SLKEDARKDLKFVSDVEKEMETLVEAVNKGKNSKKSHSFPPMNRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSVCPPTTLTG >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_581aa MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAP GGQWGPASTPSLYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL YVSLTYADLIPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLI CGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCM GKHEFRSNIPCHLVDISCGLPCSATLPCGMHKCQRLCHKGECLVDEPCKQPCTTPRADCGHPCMAPCHTSSPCPVTACKAKVELQCECGR RKEMVICSEASSTYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARLECDEECSALERKKRLAEAFHISEDSDPFNIRSSGSKFSD >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_390aa MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAP GGQWGPASTPSLYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL YVSLTYADLIPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLI CGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCM >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_677aa MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAP GGQWGPASTPSLYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL YVSLTYADLIPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLI CGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCM GKHEFRSNIPCHLVDISCGLPCSATLPCGMHKCQRLCHKGECLVDEPCKQPCTTPRADCGHPCMAPCHTSSPCPVTACKAKVELQCECGR RKEMVICSEASSTYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARLECDEECSALERKKRLAEAFHISEDSDPFNIRSSGSKFSD SLKEDARKDLKFVSDVEKEMETLVEAVNKGKNSKKSHSFPPMNRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSVCPPTTLTG >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_581aa MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAP GGQWGPASTPSLYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL YVSLTYADLIPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLI CGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCM GKHEFRSNIPCHLVDISCGLPCSATLPCGMHKCQRLCHKGECLVDEPCKQPCTTPRADCGHPCMAPCHTSSPCPVTACKAKVELQCECGR RKEMVICSEASSTYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARLECDEECSALERKKRLAEAFHISEDSDPFNIRSSGSKFSD >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_390aa MLALRVARGSWGALRGAAWAPGTRPSKRRACWALLPPVPCCLGCLAERWRLRPAALGLRLPGIGQRNHCSGAGKAAPRPAAGAGAAAEAP GGQWGPASTPSLYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISIL YVSLTYADLIPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLI CGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCM >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_578aa MPQYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISILYVSLTYADL IPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGL HRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCMGKHEFRSNI PCHLVDISCGLPCSATLPCGMHKCQRLCHKGECLVDEPCKQPCTTPRADCGHPCMAPCHTSSPCPVTACKAKVELQCECGRRKEMVICSE ASSTYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARLECDEECSALERKKRLAEAFHISEDSDPFNIRSSGSKFSDSLKEDARKD LKFVSDVEKEMETLVEAVNKGKNSKKSHSFPPMNRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSVCPPTTLTGVLEREMQAR >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_482aa MPQYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISILYVSLTYADL IPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGL HRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCMGKHEFRSNI PCHLVDISCGLPCSATLPCGMHKCQRLCHKGECLVDEPCKQPCTTPRADCGHPCMAPCHTSSPCPVTACKAKVELQCECGRRKEMVICSE ASSTYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARLECDEECSALERKKRLAEAFHISEDSDPFNIRSSGSKFSDSLKEDARKD >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_291aa MPQYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSALDPLADKILISILYVSLTYADL IPDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGL HRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCPPCTFLTQKWCMGKHEQSHYW |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_2031nt ATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCC TGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTG CCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCG GGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTG GCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGAT GGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTA TATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCT CGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGT GACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATT TGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGAT GAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGA GTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATG GGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATG CACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGT CACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGA AGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAG CTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTG GAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGAT AGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGGA AAGAATAGTAAGAAAAGCCACAGCTTCCCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTTGGCCCAAGTTTATGGCCTGGAG AGCGTGAGCTATGACAGTGAACCGAAGCGCAATGTGGTGGTCACTGCCATCAGGGGGAAGTCCGTTTGTCCTCCTACCACGCTGACAGGT GTGCTTGAAAGGGAAATGCAGGCACGGCCTCCACCACCGATTCCTCATCACAGACATCAGTCAGACAAGAATCCTGGGAGCAGTAATTTA >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_1743nt ATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCC TGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTG CCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCG GGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTG GCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGAT GGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTA TATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCT CGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGT GACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATT TGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGAT GAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGA GTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATG GGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATG CACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGT CACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGA AGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAG CTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTG GAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGAT AGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGTT >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_1170nt ATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCC TGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTG CCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCG GGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTG GCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGAT GGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTA TATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCT CGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGT GACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATT TGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGAT GAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGA GTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATG GGCAAGCATGAGCAGTCCCACTACTGGGCGTCTACCCAGAAGAAAAGAAGTCATTATATGAAAAAGATACCTGCACACGCATGTTTATAG >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_2031nt ATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCC TGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTG CCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCG GGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTG GCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGAT GGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTA TATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCT CGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGT GACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATT TGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGAT GAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGA GTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATG GGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATG CACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGT CACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGA AGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAG CTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTG GAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGAT AGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGGA AAGAATAGTAAGAAAAGCCACAGCTTCCCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTTGGCCCAAGTTTATGGCCTGGAG AGCGTGAGCTATGACAGTGAACCGAAGCGCAATGTGGTGGTCACTGCCATCAGGGGGAAGTCCGTTTGTCCTCCTACCACGCTGACAGGT GTGCTTGAAAGGGAAATGCAGGCACGGCCTCCACCACCGATTCCTCATCACAGACATCAGTCAGACAAGAATCCTGGGAGCAGTAATTTA >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_1743nt ATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCC TGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTG CCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCG GGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTG GCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGAT GGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTA TATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCT CGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGT GACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATT TGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGAT GAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGA GTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATG GGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATG CACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGT CACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGA AGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAG CTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTG GAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGAT AGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGTT >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_1170nt ATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCC TGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTG CCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCG GGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTG GCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGAT GGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTA TATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCT CGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGT GACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATT TGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGAT GAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGA GTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATG GGCAAGCATGAGCAGTCCCACTACTGGGCGTCTACCCAGAAGAAAAGAAGTCATTATATGAAAAAGATACCTGCACACGCATGTTTATAG >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_1734nt ATGCCACAGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGATTATT GAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGCCAAT CAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGATCTT ATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAGATGC TCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACGGTTG TGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTT CATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGCATCA GTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGTATAT CATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGTTTCGGAGCAACATC CCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATGCACAAATGTCAGAGACTCTGTCACAAA GGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCACCCGTGTATGGCACCCTGCCATACC AGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGAAGAAAAGAGATGGTGATTTGCTCTGAA GCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAGCTTGGAGGTTCAGTGGAGATCAGCAAG TTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTGGAAAGGAAAAAGAGATTAGCAGAGGCA TTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGATAGTTTGAAAGAAGATGCCAGGAAGGAC TTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGGAAAGAATAGTAAGAAAAGCCACAGCTTC CCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTTGGCCCAAGTTTATGGCCTGGAGAGCGTGAGCTATGACAGTGAACCGAAG CGCAATGTGGTGGTCACTGCCATCAGGGGGAAGTCCGTTTGTCCTCCTACCACGCTGACAGGTGTGCTTGAAAGGGAAATGCAGGCACGG CCTCCACCACCGATTCCTCATCACAGACATCAGTCAGACAAGAATCCTGGGAGCAGTAATTTACAGAAAATAACCAAGGAGCCAATAATT >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_1446nt ATGCCACAGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGATTATT GAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGCCAAT CAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGATCTT ATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAGATGC TCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACGGTTG TGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTT CATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGCATCA GTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGTATAT CATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGTTTCGGAGCAACATC CCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATGCACAAATGTCAGAGACTCTGTCACAAA GGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCACCCGTGTATGGCACCCTGCCATACC AGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGAAGAAAAGAGATGGTGATTTGCTCTGAA GCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAGCTTGGAGGTTCAGTGGAGATCAGCAAG TTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTGGAAAGGAAAAAGAGATTAGCAGAGGCA TTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGATAGTTTGAAAGAAGATGCCAGGAAGGAC TTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGTTGAAGTCGAAACATCCCACTGGACATTT >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_873nt ATGCCACAGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGATTATT GAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGCCAAT CAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGATCTT ATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAGATGC TCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACGGTTG TGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTT CATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGCATCA GTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGTATAT CATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGCAGTCCCACTACTGG |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_3367nt TGTATAAGTGGAGTGTGCTGGGGTGTGTAAAGTAGTATGGAGGCAGCGGTAGCCCAGTGTCTGAGTGGTTGCCGGGTCTCCATGGAGAAG CGGCTCGCCAGTGTCCCAGGCTGCTGAGCTCTCGCCGCCCGAGACCCCGCGGCGCGGCCGCAGGGCCATGCTAGCCTTGCGCGTGGCGCG CGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCCTGCTGGGCCCTGCTGCCGCCCGT GCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTGCCCGGGATCGGCCAGCGGAACCA CTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCGGGCGGCCAGTGGGGCCCGGCGAG CACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGAT TATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGC CAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGA TCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAG ATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACG GTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGG CCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGC ATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGT ATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGTTTCGGAGCAA CATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATGCACAAATGTCAGAGACTCTGTCA CAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCACCCGTGTATGGCACCCTGCCA TACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGAAGAAAAGAGATGGTGATTTGCTC TGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAGCTTGGAGGTTCAGTGGAGATCAG CAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTGGAAAGGAAAAAGAGATTAGCAGA GGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGATAGTTTGAAAGAAGATGCCAGGAA GGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGGAAAGAATAGTAAGAAAAGCCACAG CTTCCCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTTGGCCCAAGTTTATGGCCTGGAGAGCGTGAGCTATGACAGTGAACC GAAGCGCAATGTGGTGGTCACTGCCATCAGGGGGAAGTCCGTTTGTCCTCCTACCACGCTGACAGGTGTGCTTGAAAGGGAAATGCAGGC ACGGCCTCCACCACCGATTCCTCATCACAGACATCAGTCAGACAAGAATCCTGGGAGCAGTAATTTACAGAAAATAACCAAGGAGCCAAT AATTGACTATTTTGACGTCCAGGACTAAGAAGATCATGATGCACTTAGATAAAAGAATGATTAGGTATAGTGGAGACTTATTTGCCAGCA GATAAATCATGCCCGTTCCCCTCTGCCTGGCAGAATCACAGTCTCACATACTGTCTTGTACTGACACATCCAAAGCATGAGTGTGTCAGA AATCCCTTGTCTATTCCTGTCTGTATAAAGTGTTTCATTATGACCAGATCTCTGATTGTATGGTCACTAGGTATGCAATCACGCATTCAA AGAGGCTCTTTACACCATCACTGTGATTGCTCTGAGAGTTGAGGGACTATTGGGCTTTATTTGGACAAACCAAACTTTTAGCCTGAAACC AACTTTATGCCACTAAGTCATAGCCTCAGTTGTCCCAGTTATTTGTCCTCCTGAAAATGCCTGAAACATCAGACAGACATTGCTTGCTTT ACCCAAACTGATCAAAATCTTTAGGAGCACAAATGAATTTTTTAGTCTGAAATACCAAATAATGAATTGGTATACCATATCCGGAATCAC ACATGTTATCTTAAACCCAGCCATCATACCTAAGTCTTTTGCCAAAACCTCTCATAGGTATATCTAGCTGAACTTATTTTGGCATTTTCA ATGTGATCAGTTCTAGACCTAGAAGGGGGTCAGGCTGCTTTACAGAATTCTATTTCCTTAAGTCCCTGGCACTTCTCATACCACATCACT GAACCTGTTCAGTAACAATCAGTTTGGCCGTCCCCCATGATGGTAGGAAATATAGAGAGCAAGTTCTTCTGCCAGGGTCACACTGTGGTC TCTGAACTGACCAGTATATCCCTAACTCCTCTTTGATAGAGAAAGAGTCTCAAATGGACAACTGTCCTGTGTTGCTTTCCCTAGGCCTTC AGCAGCCTATTGGCTCTCCCTGCCTCTGAGCTCTGGACTCTGTTTGAATATTCCAAGTAGTATATGGACAGTCCAGGGCTTATGCCCAGC AGCCCACTGGAGGCATTCTTCAGGCTCCTTTAAGGCAGGTGCATTGATAGTTCCATTAGTGTGACCCTTGCATTGGCACCCCTCCAGCCT GGAGGCCAGGCTTCCAGCAACTTCCTTCTGCCCTAGAGCAAGCCATGAGCCCCAGAGCAGTAGCAGGAGACTTGAGAAGTAGAGTGACAA >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_2373nt TGTATAAGTGGAGTGTGCTGGGGTGTGTAAAGTAGTATGGAGGCAGCGGTAGCCCAGTGTCTGAGTGGTTGCCGGGTCTCCATGGAGAAG CGGCTCGCCAGTGTCCCAGGCTGCTGAGCTCTCGCCGCCCGAGACCCCGCGGCGCGGCCGCAGGGCCATGCTAGCCTTGCGCGTGGCGCG CGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCCTGCTGGGCCCTGCTGCCGCCCGT GCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTGCCCGGGATCGGCCAGCGGAACCA CTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCGGGCGGCCAGTGGGGCCCGGCGAG CACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGAT TATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGC CAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGA TCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAG ATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACG GTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGG CCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGC ATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGT ATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGTTTCGGAGCAA CATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATGTGGGATGCACAAATGTCAGAGACTCTGTCA CAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCACCCGTGTATGGCACCCTGCCA TACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATGTGGACGAAGAAAAGAGATGGTGATTTGCTC TGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGACATGCAGCTTGGAGGTTCAGTGGAGATCAG CAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTGGAAAGGAAAAAGAGATTAGCAGA GGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATTCAGTGATAGTTTGAAAGAAGATGCCAGGAA GGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAATAAGGTTGAAGTCGAAACATCCCACTGGAC ATTTCTCTAAGGCCAGCTTGATGAAAAAAAAAAAGCAATCAAGTCCTGGAAACACTTTCAACCTAGAGTAGTTGTAGGAAAAAGTCACAA CTTCTTTGAGGATCCTTATCTTTCTCAAAACACAGCCATTATAACATCTGTGGAAGCCTGTCCTGGTTCAGGACAGTTGACTGCAGAAAA GATCTACAGTCGGCTGGGCACAGTGTCTCATGCCTGTAATGCCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGAGTT CTAGATCAGCTTGGCCAACATGACGAAACCCTGTCTCTACTAAAAATATAAAAATTAGCTGGGTGTGGTGGCGGGCACCTGTTATTCCAG CTACTTGCAAGGCTTAGGCAGGAGAATTCCTTGAACCCGGGAGGCAGAGGTTGCTGTGAGCTGAGATTCTGCCACTGCACTCCAGCCTGG >In-frame_CRLS1_ENST00000378863_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_2310nt TGTATAAGTGGAGTGTGCTGGGGTGTGTAAAGTAGTATGGAGGCAGCGGTAGCCCAGTGTCTGAGTGGTTGCCGGGTCTCCATGGAGAAG CGGCTCGCCAGTGTCCCAGGCTGCTGAGCTCTCGCCGCCCGAGACCCCGCGGCGCGGCCGCAGGGCCATGCTAGCCTTGCGCGTGGCGCG CGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCGACGCGCCTGCTGGGCCCTGCTGCCGCCCGT GCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTTGCGGCTGCCCGGGATCGGCCAGCGGAACCA CTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGAAGCCCCGGGCGGCCAGTGGGGCCCGGCGAG CACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGAT TATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGC CAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGA TCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAG ATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACG GTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGG CCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGC ATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGT ATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGCAGTCCCACTA CTGGGCGTCTACCCAGAAGAAAAGAAGTCATTATATGAAAAAGATACCTGCACACGCATGTTTATAGCAGCACAATTCACAATTGCAAAA ATGTGGAACCAGCCCAACTGCCCATCAGTCAACAAGTGGATAAAGAAATTGTGGTGTATCTATACGTACCATGGAATACTACTCAGCCAG GAACGAAATAATGGCATTCACAGCAACCTGGATGGATTTGGAGACCATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACATCG TATGTTCTCAATTATAAGAGGGAGCTAAGCTATGAGGACGCAAAGGCATGAGAATGATACAATGGACTTTGGGGACTCTGGGGAAAGGAC GGGAGGCGGGTGAGGGATAAAAAACTACACACTGGGTCCGAGCACGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGCAG GTAGATTATGAGGTCGGGAGTTCGAAACCAGCCTGGCCAACAAGGTGAGACCCCCCCCATCTCTACTAAAATAATTAGCCGGGCCTGGTG GCGCATCCCTGTAATCCCAGCTACTTTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAGGCGGATGTTGCAGTGAGCCAAT ATCGCACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCGAAAAAAAAAATAAATTTTAAAAACTACACATTGGGTACAAT GTACACTCCTCGGGTGATGGGTGCACCAAAATCTCAAAAATCACTACTAAGGAACTTATCCATGTAACCAAACACCACCTGTTCCCCAAG AACTATTGAAATAAGAAAAAAGAAAAAAAAAAAATCACTGATTGCAGGTCACCCTAACAGATATAATAATGAAAAAGTCTGAGATGTTGC GAGAATTACCAAAATGTGATGCAGACACGAAATGAGCATGTGCTGTTGGAAAAGTGGAACAGATAGACTTGCTGGAGACAGGGTTGCCAC >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_3307nt CTGAGTGGTTGCCGGGTCTCCATGGAGAAGCGGCTCGCCAGTGTCCCAGGCTGCTGAGCTCTCGCCGCCCGAGACCCCGCGGCGCGGCCG CAGGGCCATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCG ACGCGCCTGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTT GCGGCTGCCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGA AGCCCCGGGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAAT TGGCTTGGCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTT GTTGGATGGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAG TATCTTATATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACC ATGCTCTCGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATT TATGTGTGACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCC TTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAG TTTTGATGAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTG CGCTAGAGTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTG GTGCATGGGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATG TGGGATGCACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGA CTGTGGTCACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATG TGGACGAAGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGA CATGCAGCTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTC AGCCTTGGAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATT CAGTGATAGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAA TAAGGGAAAGAATAGTAAGAAAAGCCACAGCTTCCCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTTGGCCCAAGTTTATGG CCTGGAGAGCGTGAGCTATGACAGTGAACCGAAGCGCAATGTGGTGGTCACTGCCATCAGGGGGAAGTCCGTTTGTCCTCCTACCACGCT GACAGGTGTGCTTGAAAGGGAAATGCAGGCACGGCCTCCACCACCGATTCCTCATCACAGACATCAGTCAGACAAGAATCCTGGGAGCAG TAATTTACAGAAAATAACCAAGGAGCCAATAATTGACTATTTTGACGTCCAGGACTAAGAAGATCATGATGCACTTAGATAAAAGAATGA TTAGGTATAGTGGAGACTTATTTGCCAGCAGATAAATCATGCCCGTTCCCCTCTGCCTGGCAGAATCACAGTCTCACATACTGTCTTGTA CTGACACATCCAAAGCATGAGTGTGTCAGAAATCCCTTGTCTATTCCTGTCTGTATAAAGTGTTTCATTATGACCAGATCTCTGATTGTA TGGTCACTAGGTATGCAATCACGCATTCAAAGAGGCTCTTTACACCATCACTGTGATTGCTCTGAGAGTTGAGGGACTATTGGGCTTTAT TTGGACAAACCAAACTTTTAGCCTGAAACCAACTTTATGCCACTAAGTCATAGCCTCAGTTGTCCCAGTTATTTGTCCTCCTGAAAATGC CTGAAACATCAGACAGACATTGCTTGCTTTACCCAAACTGATCAAAATCTTTAGGAGCACAAATGAATTTTTTAGTCTGAAATACCAAAT AATGAATTGGTATACCATATCCGGAATCACACATGTTATCTTAAACCCAGCCATCATACCTAAGTCTTTTGCCAAAACCTCTCATAGGTA TATCTAGCTGAACTTATTTTGGCATTTTCAATGTGATCAGTTCTAGACCTAGAAGGGGGTCAGGCTGCTTTACAGAATTCTATTTCCTTA AGTCCCTGGCACTTCTCATACCACATCACTGAACCTGTTCAGTAACAATCAGTTTGGCCGTCCCCCATGATGGTAGGAAATATAGAGAGC AAGTTCTTCTGCCAGGGTCACACTGTGGTCTCTGAACTGACCAGTATATCCCTAACTCCTCTTTGATAGAGAAAGAGTCTCAAATGGACA ACTGTCCTGTGTTGCTTTCCCTAGGCCTTCAGCAGCCTATTGGCTCTCCCTGCCTCTGAGCTCTGGACTCTGTTTGAATATTCCAAGTAG TATATGGACAGTCCAGGGCTTATGCCCAGCAGCCCACTGGAGGCATTCTTCAGGCTCCTTTAAGGCAGGTGCATTGATAGTTCCATTAGT GTGACCCTTGCATTGGCACCCCTCCAGCCTGGAGGCCAGGCTTCCAGCAACTTCCTTCTGCCCTAGAGCAAGCCATGAGCCCCAGAGCAG >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_2313nt CTGAGTGGTTGCCGGGTCTCCATGGAGAAGCGGCTCGCCAGTGTCCCAGGCTGCTGAGCTCTCGCCGCCCGAGACCCCGCGGCGCGGCCG CAGGGCCATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCG ACGCGCCTGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTT GCGGCTGCCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGA AGCCCCGGGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAAT TGGCTTGGCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTT GTTGGATGGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAG TATCTTATATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACC ATGCTCTCGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATT TATGTGTGACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCC TTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAG TTTTGATGAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTG CGCTAGAGTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTG GTGCATGGGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCAGTGCCACGCTACCATG TGGGATGCACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAGCAGCCCTGCACCACCCCCAGAGCTGA CTGTGGTCACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAAGCTAAGGTAGAGCTACAGTGTGAATG TGGACGAAGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCAATCTCCATGGCCTCTAAGATAACAGA CATGCAGCTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTC AGCCTTGGAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTCAATATACGTTCTTCAGGGTCAAAATT CAGTGATAGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAAATGGAAACCCTCGTGGAGGCCGTGAA TAAGGTTGAAGTCGAAACATCCCACTGGACATTTCTCTAAGGCCAGCTTGATGAAAAAAAAAAAGCAATCAAGTCCTGGAAACACTTTCA ACCTAGAGTAGTTGTAGGAAAAAGTCACAACTTCTTTGAGGATCCTTATCTTTCTCAAAACACAGCCATTATAACATCTGTGGAAGCCTG TCCTGGTTCAGGACAGTTGACTGCAGAAAAGATCTACAGTCGGCTGGGCACAGTGTCTCATGCCTGTAATGCCAGCACTTTGGGAGGCCA AGGCAGGCAGATCACTTGAGGTCAGGAGTTCTAGATCAGCTTGGCCAACATGACGAAACCCTGTCTCTACTAAAAATATAAAAATTAGCT GGGTGTGGTGGCGGGCACCTGTTATTCCAGCTACTTGCAAGGCTTAGGCAGGAGAATTCCTTGAACCCGGGAGGCAGAGGTTGCTGTGAG >In-frame_CRLS1_ENST00000452938_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_2250nt CTGAGTGGTTGCCGGGTCTCCATGGAGAAGCGGCTCGCCAGTGTCCCAGGCTGCTGAGCTCTCGCCGCCCGAGACCCCGCGGCGCGGCCG CAGGGCCATGCTAGCCTTGCGCGTGGCGCGCGGCTCGTGGGGGGCCCTGCGCGGCGCCGCTTGGGCTCCGGGAACGCGGCCGAGTAAGCG ACGCGCCTGCTGGGCCCTGCTGCCGCCCGTGCCCTGCTGCTTGGGCTGCCTGGCCGAACGCTGGAGGCTGCGTCCGGCCGCTCTTGGCTT GCGGCTGCCCGGGATCGGCCAGCGGAACCACTGTTCGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCGCCGCTGCCGA AGCCCCGGGCGGCCAGTGGGGCCCGGCGAGCACCCCCAGCCTGTATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGACGAGAAT TGGCTTGGCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTTTTTGCTTTAGCTGGACTAACAGATTT GTTGGATGGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAG TATCTTATATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAGCTCTGCCATGAAGGAGACTGTGGACC ATGCTCTCGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACCAGTCTCAAAAGTGAAGATGCTACATT TATGTGTGACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAGTGTCC TTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGAAACTGCCAGACATGCTGGCAAGCCAG TTTTGATGAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACTAGGCCCCCTGAATGTACCCAAACCTG CGCTAGAGTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCCCCTTGCACTTTCCTAACTCAGAAGTG GTGCATGGGCAAGCATGAGCAGTCCCACTACTGGGCGTCTACCCAGAAGAAAAGAAGTCATTATATGAAAAAGATACCTGCACACGCATG TTTATAGCAGCACAATTCACAATTGCAAAAATGTGGAACCAGCCCAACTGCCCATCAGTCAACAAGTGGATAAAGAAATTGTGGTGTATC TATACGTACCATGGAATACTACTCAGCCAGGAACGAAATAATGGCATTCACAGCAACCTGGATGGATTTGGAGACCATTATTCTAAGTGA AGTAACTCAGGAATGGAAAACCAAACATCGTATGTTCTCAATTATAAGAGGGAGCTAAGCTATGAGGACGCAAAGGCATGAGAATGATAC AATGGACTTTGGGGACTCTGGGGAAAGGACGGGAGGCGGGTGAGGGATAAAAAACTACACACTGGGTCCGAGCACGGTGGCTCATGCCTA TAATCCCAGCACTTTGGGAGGCCAAGGCAGGTAGATTATGAGGTCGGGAGTTCGAAACCAGCCTGGCCAACAAGGTGAGACCCCCCCCAT CTCTACTAAAATAATTAGCCGGGCCTGGTGGCGCATCCCTGTAATCCCAGCTACTTTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA CTCGGGAGGCGGATGTTGCAGTGAGCCAATATCGCACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCGAAAAAAAAAAT AAATTTTAAAAACTACACATTGGGTACAATGTACACTCCTCGGGTGATGGGTGCACCAAAATCTCAAAAATCACTACTAAGGAACTTATC CATGTAACCAAACACCACCTGTTCCCCAAGAACTATTGAAATAAGAAAAAAGAAAAAAAAAAAATCACTGATTGCAGGTCACCCTAACAG ATATAATAATGAAAAAGTCTGAGATGTTGCGAGAATTACCAAAATGTGATGCAGACACGAAATGAGCATGTGCTGTTGGAAAAGTGGAAC AGATAGACTTGCTGGAGACAGGGTTGCCACAAAGTTTCAATTTGTAAAAAATGTGATATCTATGAAATGCAATAAAGTGAAGTCCAATAA >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000379540_chr9_33328579_+_3063nt AGTTGTACAGCATGGGTTGAGGTGGCCAGATCCTGGCAGGGGTCTCAACTCCACTGATAGCTAAAGCATGTTGGGGTTTGAATGCTGGAT ACTTTGAAGTTGCCATATCCTGACTGAAGTCCTTCCCAGAACGGCAGTAGTTGGTCGAGTATGCCACAGTATGAAAACCCATGGACAATC CCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTT TTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGAT CCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAG CTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACC AGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGC TGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGA AACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACT AGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCC CCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGA TTACCCTGCAGTGCCACGCTACCATGTGGGATGCACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAG CAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAA GCTAAGGTAGAGCTACAGTGTGAATGTGGACGAAGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCA ATCTCCATGGCCTCTAAGATAACAGACATGCAGCTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCC AGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTGGAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTC AATATACGTTCTTCAGGGTCAAAATTCAGTGATAGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAA ATGGAAACCCTCGTGGAGGCCGTGAATAAGGGAAAGAATAGTAAGAAAAGCCACAGCTTCCCTCCCATGAACAGAGACCACCGCCGGATC ATCCATGACTTGGCCCAAGTTTATGGCCTGGAGAGCGTGAGCTATGACAGTGAACCGAAGCGCAATGTGGTGGTCACTGCCATCAGGGGG AAGTCCGTTTGTCCTCCTACCACGCTGACAGGTGTGCTTGAAAGGGAAATGCAGGCACGGCCTCCACCACCGATTCCTCATCACAGACAT CAGTCAGACAAGAATCCTGGGAGCAGTAATTTACAGAAAATAACCAAGGAGCCAATAATTGACTATTTTGACGTCCAGGACTAAGAAGAT CATGATGCACTTAGATAAAAGAATGATTAGGTATAGTGGAGACTTATTTGCCAGCAGATAAATCATGCCCGTTCCCCTCTGCCTGGCAGA ATCACAGTCTCACATACTGTCTTGTACTGACACATCCAAAGCATGAGTGTGTCAGAAATCCCTTGTCTATTCCTGTCTGTATAAAGTGTT TCATTATGACCAGATCTCTGATTGTATGGTCACTAGGTATGCAATCACGCATTCAAAGAGGCTCTTTACACCATCACTGTGATTGCTCTG AGAGTTGAGGGACTATTGGGCTTTATTTGGACAAACCAAACTTTTAGCCTGAAACCAACTTTATGCCACTAAGTCATAGCCTCAGTTGTC CCAGTTATTTGTCCTCCTGAAAATGCCTGAAACATCAGACAGACATTGCTTGCTTTACCCAAACTGATCAAAATCTTTAGGAGCACAAAT GAATTTTTTAGTCTGAAATACCAAATAATGAATTGGTATACCATATCCGGAATCACACATGTTATCTTAAACCCAGCCATCATACCTAAG TCTTTTGCCAAAACCTCTCATAGGTATATCTAGCTGAACTTATTTTGGCATTTTCAATGTGATCAGTTCTAGACCTAGAAGGGGGTCAGG CTGCTTTACAGAATTCTATTTCCTTAAGTCCCTGGCACTTCTCATACCACATCACTGAACCTGTTCAGTAACAATCAGTTTGGCCGTCCC CCATGATGGTAGGAAATATAGAGAGCAAGTTCTTCTGCCAGGGTCACACTGTGGTCTCTGAACTGACCAGTATATCCCTAACTCCTCTTT GATAGAGAAAGAGTCTCAAATGGACAACTGTCCTGTGTTGCTTTCCCTAGGCCTTCAGCAGCCTATTGGCTCTCCCTGCCTCTGAGCTCT GGACTCTGTTTGAATATTCCAAGTAGTATATGGACAGTCCAGGGCTTATGCCCAGCAGCCCACTGGAGGCATTCTTCAGGCTCCTTTAAG GCAGGTGCATTGATAGTTCCATTAGTGTGACCCTTGCATTGGCACCCCTCCAGCCTGGAGGCCAGGCTTCCAGCAACTTCCTTCTGCCCT AGAGCAAGCCATGAGCCCCAGAGCAGTAGCAGGAGACTTGAGAAGTAGAGTGACAAAAACAAGCACTTAATTAAATTATAAAATTTAACT >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000379521_chr9_33328579_+_2069nt AGTTGTACAGCATGGGTTGAGGTGGCCAGATCCTGGCAGGGGTCTCAACTCCACTGATAGCTAAAGCATGTTGGGGTTTGAATGCTGGAT ACTTTGAAGTTGCCATATCCTGACTGAAGTCCTTCCCAGAACGGCAGTAGTTGGTCGAGTATGCCACAGTATGAAAACCCATGGACAATC CCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTT TTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGAT CCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAG CTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACC AGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGC TGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGA AACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACT AGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCC CCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGTTTCGGAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGA TTACCCTGCAGTGCCACGCTACCATGTGGGATGCACAAATGTCAGAGACTCTGTCACAAAGGGGAGTGTCTTGTGGATGAGCCCTGCAAG CAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCACCCGTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGACTGCTTGTAAA GCTAAGGTAGAGCTACAGTGTGAATGTGGACGAAGAAAAGAGATGGTGATTTGCTCTGAAGCATCTAGTACTTATCAAAGAATAGCTGCA ATCTCCATGGCCTCTAAGATAACAGACATGCAGCTTGGAGGTTCAGTGGAGATCAGCAAGTTAATTACCAAAAAGGAAGTTCATCAAGCC AGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTGGAAAGGAAAAAGAGATTAGCAGAGGCATTTCATATCAGTGAGGATTCTGATCCTTTC AATATACGTTCTTCAGGGTCAAAATTCAGTGATAGTTTGAAAGAAGATGCCAGGAAGGACTTAAAGTTTGTCAGTGACGTTGAGAAGGAA ATGGAAACCCTCGTGGAGGCCGTGAATAAGGTTGAAGTCGAAACATCCCACTGGACATTTCTCTAAGGCCAGCTTGATGAAAAAAAAAAA GCAATCAAGTCCTGGAAACACTTTCAACCTAGAGTAGTTGTAGGAAAAAGTCACAACTTCTTTGAGGATCCTTATCTTTCTCAAAACACA GCCATTATAACATCTGTGGAAGCCTGTCCTGGTTCAGGACAGTTGACTGCAGAAAAGATCTACAGTCGGCTGGGCACAGTGTCTCATGCC TGTAATGCCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGAGTTCTAGATCAGCTTGGCCAACATGACGAAACCCTGT CTCTACTAAAAATATAAAAATTAGCTGGGTGTGGTGGCGGGCACCTGTTATTCCAGCTACTTGCAAGGCTTAGGCAGGAGAATTCCTTGA >In-frame_CRLS1_ENST00000378868_chr20_5996136_+_NFX1_ENST00000318524_chr9_33328579_+_2006nt AGTTGTACAGCATGGGTTGAGGTGGCCAGATCCTGGCAGGGGTCTCAACTCCACTGATAGCTAAAGCATGTTGGGGTTTGAATGCTGGAT ACTTTGAAGTTGCCATATCCTGACTGAAGTCCTTCCCAGAACGGCAGTAGTTGGTCGAGTATGCCACAGTATGAAAACCCATGGACAATC CCGAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTCTGGGCTATTTGATTATTGAAGAAGATTTTAATATTGCACTAGGAGTT TTTGCTTTAGCTGGACTAACAGATTTGTTGGATGGATTTATTGCTCGAAACTGGGCCAATCAAAGATCAGCTTTGGGAAGTGCTCTTGAT CCACTTGCTGATAAAATACTTATCAGTATCTTATATGTTAGCTTGACCTATGCAGATCTTATTCCAGATTTCATTCATACCTGTGAAAAG CTCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGGAGCTTCCATGTACC AGTCTCAAAAGTGAAGATGCTACATTTATGTGTGACAAGCGGTGTAACAAGAAACGGTTGTGTGGACGGCATAAATGTAATGAGATATGC TGTGTGGATAAGGAGCACAAGTGTCCTTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTTCATAGGTGTGAAGAACCTTGTCATCGTGGA AACTGCCAGACATGCTGGCAAGCCAGTTTTGATGAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCCAGTTCCCTGTGGTACT AGGCCCCCTGAATGTACCCAAACCTGCGCTAGAGTCCATGAGTGTGACCATCCAGTATATCATTCTTGTCATAGTGAGGAGAAGTGTCCC CCTTGCACTTTCCTAACTCAGAAGTGGTGCATGGGCAAGCATGAGCAGTCCCACTACTGGGCGTCTACCCAGAAGAAAAGAAGTCATTAT ATGAAAAAGATACCTGCACACGCATGTTTATAGCAGCACAATTCACAATTGCAAAAATGTGGAACCAGCCCAACTGCCCATCAGTCAACA AGTGGATAAAGAAATTGTGGTGTATCTATACGTACCATGGAATACTACTCAGCCAGGAACGAAATAATGGCATTCACAGCAACCTGGATG GATTTGGAGACCATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACATCGTATGTTCTCAATTATAAGAGGGAGCTAAGCTATG AGGACGCAAAGGCATGAGAATGATACAATGGACTTTGGGGACTCTGGGGAAAGGACGGGAGGCGGGTGAGGGATAAAAAACTACACACTG GGTCCGAGCACGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGCAGGTAGATTATGAGGTCGGGAGTTCGAAACCAGCCT GGCCAACAAGGTGAGACCCCCCCCATCTCTACTAAAATAATTAGCCGGGCCTGGTGGCGCATCCCTGTAATCCCAGCTACTTTACTTGGG AGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAGGCGGATGTTGCAGTGAGCCAATATCGCACCACTGCACTCCAGCCTGGGCAACAGAG CAAGACTCCGTCTCGAAAAAAAAAATAAATTTTAAAAACTACACATTGGGTACAATGTACACTCCTCGGGTGATGGGTGCACCAAAATCT CAAAAATCACTACTAAGGAACTTATCCATGTAACCAAACACCACCTGTTCCCCAAGAACTATTGAAATAAGAAAAAAGAAAAAAAAAAAA TCACTGATTGCAGGTCACCCTAACAGATATAATAATGAAAAAGTCTGAGATGTTGCGAGAATTACCAAAATGTGATGCAGACACGAAATG AGCATGTGCTGTTGGAAAAGTGGAACAGATAGACTTGCTGGAGACAGGGTTGCCACAAAGTTTCAATTTGTAAAAAATGTGATATCTATG |
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FusionGenePPI for CRLS1_NFX1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| CRLS1 | FBXO15, PINK1 | NFX1 | UBE2N, MAML3, SIN3A, USP9X, PABPC1, EEF1A2, MATR3, PABPC3, HSPA1A, HNRNPM, HNRNPU, RPL13, SRSF4, HIST1H2AE, RPL7A, FAM208B, LARP1, DDX5, DMD, NCL, RPL13A, RPL17, RPL22, RPL3, RPL6, HNRNPA2B1, HNRNPH1, RPS19, RPS3A, SRSF3, APC2, YBX1, HIST1H4E, HECW2, SHMT2, MOV10, NXF1, BMI1, XPO1, FAM46A, APBA3, ZNF263, UBC |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000318524 | + | 8 | 16 | 9_26 | 635 | 834 | PABPC1 and PABC4 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379521 | + | 8 | 21 | 9_26 | 635 | 1025 | PABPC1 and PABC4 |
| Tgene | NFX1 | chr20:5996136 | chr9:33328579 | ENST00000379540 | + | 8 | 24 | 9_26 | 635 | 1121 | PABPC1 and PABC4 |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CRLS1_NFX1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CRLS1_NFX1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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