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Fusion gene ID: 8090 |
FusionGeneSummary for COPS4_NFXL1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: COPS4_NFXL1 | Fusion gene ID: 8090 | Hgene | Tgene | Gene symbol | COPS4 | NFXL1 | Gene ID | 51138 | 152518 |
Gene name | COP9 signalosome subunit 4 | nuclear transcription factor, X-box binding like 1 | |
Synonyms | CSN4|SGN4 | CDZFP|HOZFP|OZFP|URCC5 | |
Cytomap | 4q21.22 | 4p12 | |
Type of gene | protein-coding | protein-coding | |
Description | COP9 signalosome complex subunit 4COP9 constitutive photomorphogenic homolog subunit 4COP9 constitutive photomorphogenic-like protein subunit 4JAB1-containing signalosome subunit 4signalosome subunit 4testis tissue sperm-binding protein Li 42a | NF-X1-type zinc finger protein NFXL1cytoplasm-distribution zinc finger proteinovarian zinc finger proteinup-regulated in colon cancer 5 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9BT78 | Q6ZNB6 | |
Ensembl transtripts involved in fusion gene | ENST00000509093, ENST00000264389, ENST00000503682, ENST00000511653, ENST00000511708, | ENST00000381538, ENST00000507489, ENST00000329043, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 3 X 3 X 3=27 |
# samples | 1 | 3 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: COPS4 [Title/Abstract] AND NFXL1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | COPS4 | GO:0000338 | protein deneddylation | 19141280 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | COAD | TCGA-AZ-6601-01A | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000509093 | ENST00000381538 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000509093 | ENST00000507489 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000509093 | ENST00000329043 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000264389 | ENST00000381538 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000264389 | ENST00000507489 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000264389 | ENST00000329043 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000503682 | ENST00000381538 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000503682 | ENST00000507489 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000503682 | ENST00000329043 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000511653 | ENST00000381538 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000511653 | ENST00000507489 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
In-frame | ENST00000511653 | ENST00000329043 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
3UTR-3CDS | ENST00000511708 | ENST00000381538 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
3UTR-3CDS | ENST00000511708 | ENST00000507489 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
3UTR-3CDS | ENST00000511708 | ENST00000329043 | COPS4 | chr4 | 83966858 | + | NFXL1 | chr4 | 47888016 | - |
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FusionProtFeatures for COPS4_NFXL1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
COPS4 | NFXL1 |
Component of the COP9 signalosome complex (CSN), acomplex involved in various cellular and developmental processes.The CSN complex is an essential regulator of the ubiquitin (Ubl)conjugation pathway by mediating the deneddylation of the cullinsubunits of SCF-type E3 ligase complexes, leading to decrease theUbl ligase activity of SCF-type complexes such as SCF, CSA orDDB2. Also involved in the deneddylation of non-cullin subunitssuch as STON2. The complex is also involved in phosphorylation ofp53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1, IRF8/ICSBP andSNAPIN, possibly via its association with CK2 and PKD kinases.CSN-dependent phosphorylation of TP53 and JUN promotes andprotects degradation by the Ubl system, respectively.{ECO:0000269|PubMed:11285227, ECO:0000269|PubMed:11337588,ECO:0000269|PubMed:12628923, ECO:0000269|PubMed:12732143,ECO:0000269|PubMed:21102408, ECO:0000269|PubMed:9535219}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 822_873 | 514 | 734 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 822_873 | 514 | 912 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 822_873 | 514 | 912 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 889_906 | 514 | 734 | Transmembrane | Helical |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 889_906 | 514 | 912 | Transmembrane | Helical |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 889_906 | 514 | 912 | Transmembrane | Helical |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 674_702 | 514 | 734 | Zinc finger | Note=NF-X1-type 8 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 715_733 | 514 | 734 | Zinc finger | Note=NF-X1-type 9 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 777_796 | 514 | 734 | Zinc finger | Note=NF-X1-type 10 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 674_702 | 514 | 912 | Zinc finger | Note=NF-X1-type 8 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 715_733 | 514 | 912 | Zinc finger | Note=NF-X1-type 9 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 777_796 | 514 | 912 | Zinc finger | Note=NF-X1-type 10 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 674_702 | 514 | 912 | Zinc finger | Note=NF-X1-type 8 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 715_733 | 514 | 912 | Zinc finger | Note=NF-X1-type 9 |
Tgene | >NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 777_796 | 514 | 912 | Zinc finger | Note=NF-X1-type 10 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >COPS4 | chr4:83966858 | chr4:47888016 | ENST00000264389 | + | 2 | 10 | 197_366 | 51 | 407 | Domain | PCI |
Hgene | >COPS4 | chr4:83966858 | chr4:47888016 | ENST00000509093 | + | 2 | 9 | 197_366 | 51 | 353 | Domain | PCI |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 160_220 | 514 | 734 | Zinc finger | RING-type%3B atypical |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 269_287 | 514 | 734 | Zinc finger | Note=NF-X1-type 1 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 322_341 | 514 | 734 | Zinc finger | Note=NF-X1-type 2 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 375_394 | 514 | 734 | Zinc finger | Note=NF-X1-type 3 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 428_447 | 514 | 734 | Zinc finger | Note=NF-X1-type 4 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 455_476 | 514 | 734 | Zinc finger | Note=NF-X1-type 5 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 480_499 | 514 | 734 | Zinc finger | Note=NF-X1-type 6 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000329043 | - | 11 | 18 | 507_526 | 514 | 734 | Zinc finger | Note=NF-X1-type 7 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 160_220 | 514 | 912 | Zinc finger | RING-type%3B atypical |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 269_287 | 514 | 912 | Zinc finger | Note=NF-X1-type 1 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 322_341 | 514 | 912 | Zinc finger | Note=NF-X1-type 2 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 375_394 | 514 | 912 | Zinc finger | Note=NF-X1-type 3 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 428_447 | 514 | 912 | Zinc finger | Note=NF-X1-type 4 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 455_476 | 514 | 912 | Zinc finger | Note=NF-X1-type 5 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 480_499 | 514 | 912 | Zinc finger | Note=NF-X1-type 6 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000381538 | - | 11 | 23 | 507_526 | 514 | 912 | Zinc finger | Note=NF-X1-type 7 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 160_220 | 514 | 912 | Zinc finger | RING-type%3B atypical |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 269_287 | 514 | 912 | Zinc finger | Note=NF-X1-type 1 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 322_341 | 514 | 912 | Zinc finger | Note=NF-X1-type 2 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 375_394 | 514 | 912 | Zinc finger | Note=NF-X1-type 3 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 428_447 | 514 | 912 | Zinc finger | Note=NF-X1-type 4 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 455_476 | 514 | 912 | Zinc finger | Note=NF-X1-type 5 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 480_499 | 514 | 912 | Zinc finger | Note=NF-X1-type 6 |
Tgene | NFXL1 | chr4:83966858 | chr4:47888016 | ENST00000507489 | - | 11 | 23 | 507_526 | 514 | 912 | Zinc finger | Note=NF-X1-type 7 |
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FusionGeneSequence for COPS4_NFXL1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_271aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKIGKLKLCDLSMILQQESSKSESTVPDLLTPSPMCSSTHVI >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_271aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKIGKLKLCDLSMILQQESSKSESTVPDLLTPSPMCSSTHVI >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_271aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKIGKLKLCDLSMILQQESSKSESTVPDLLTPSPMCSSTHVI >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_449aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQML RIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQVSIEC >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_271aa MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEASSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQ CSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLG KHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKIGKLKLCDLSMILQQESSKSESTVPDLLTPSPMCSSTHVI |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_813nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGATAGGGAAACTGAAGCTCTGTGATTTGTCC ATGATTCTGCAACAGGAGAGTAGCAAATCAGAAAGTACTGTGCCTGATCTTTTAACTCCCAGCCCAATGTGCTCTTCTACTCATGTTATT >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_813nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGATAGGGAAACTGAAGCTCTGTGATTTGTCC ATGATTCTGCAACAGGAGAGTAGCAAATCAGAAAGTACTGTGCCTGATCTTTTAACTCCCAGCCCAATGTGCTCTTCTACTCATGTTATT >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_813nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGATAGGGAAACTGAAGCTCTGTGATTTGTCC ATGATTCTGCAACAGGAGAGTAGCAAATCAGAAAGTACTGTGCCTGATCTTTTAACTCCCAGCCCAATGTGCTCTTCTACTCATGTTATT >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_1347nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_813nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGATAGGGAAACTGAAGCTCTGTGATTTGTCC ATGATTCTGCAACAGGAGAGTAGCAAATCAGAAAGTACTGTGCCTGATCTTTTAACTCCCAGCCCAATGTGCTCTTCTACTCATGTTATT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_3048nt ATTCTCCTGCCTCAGCCTCCCGAGTTGCTGGGACTACAGGGGTGCACCACCTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGAACG GGGTTTCACCGTGTTAGCCAGGATGGCCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCTGCCCAAAGTGCTGGGATTACAGGCGT GAGCCACCGCGCCCGGCCGAAAGGGGGGATATTAATCATTACTCCAGGACGACAGAGGGAAAATCGCTTTGTACTGGACAAACTGGAATG TCTGACCAACCATTATAAAGTGCACGGAGTGGGAGGAGGAATAGGGACATTTTAATTGTATTTCTAAAAAGTATCTTCTGTGGTGAATCG GAAACAAAACTCATTCTTTACCACAGGCAGTTTAAGCGCTGCCTGAAAGATCGAAGGACGGTAAACCACAGACGTGAGAAACGGAACTTT GCGAAAACGCAGTCGTTTTATGTACCGGCTACTCATTGGAGTTACACCAGAGACTCACTACTGGAGTTCATCAGCCAATCCAAAGTCCAA GCGTGAGAGCCAGAGCCTGTAGGAGAGACCTGGGCAGGCCTCAGACCTGAGGAGTGGAGCTCCGCATCACTCAACCCTGGGGGCGGAGCT AGCCCAGGCTCCCACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCAC ACTCGTTTTCTTTTTGGCTGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCA GCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACA ACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAA GGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAG TCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCC TGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTAT TCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGC TGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAA AACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAAGGGTGCTCCAAGTCACGGCCACTAGGTTGTCT TCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTTAGAATAAAATGTCACTGTAAGATCACAAGCCT GTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGTTGTTGCAAAAATCAGTGCCCTAAAGAGCTTCC TTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAACCAGAAGGTAAAACTTAGATGTCCTTGTAAAAG AATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGTGACACAACGTGCAAGGAAATGAAGCGGAAAGC ATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAACAGGCTGAACTAGAAGCTTTTGAAAACAGACT GAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTATGGCAAAAACATAAATATTATCTCATTTCAGT GTGTGGAGTTGTGGTTGTAGTGTTTGCCTGGTACATCACCCATGATGTCAATTAAAAAAAGTTTTGATCTTTTAATGTAACTCAGATTGG ATTTAGATAAGTTGTTAAATTTGAAATATTAGAAAATGTATATTATAGAACATGATATATATTTACATTCATCTCTGTATTCTCTCAGCT GTTGTTAGAAGGACAGAATGTTAAACTTTATCTTAATTAGTATACTAGAAAGGGCAGTATAATACTGTTTTAAAGTGAAGGCATGACTGA AACTAAAATATTTCATAAGGCTTAGCTAGAGGCAGAGTAACGTGTTTTTGTTCATTGGGCTTCCTTGTACTTAGTTTTTTCATTTAATAA TTCAAACCAACACTTTTAAAAAAATAATTCAGATGAGACTGAGCCATATCTGCAGTAAGAGAAATATTTCTTAATGTTTTGGTTACTTAT GATAGAGTACTTTTCTTGATACTGTTAACTTTGTGCTTTTTAAAAAAAGTGATTCTCTAACAGACCTCTTAAATTGTGACATGAAGGTAT GTAATTAGATTTCAGAAATTGGTTTATTAGTGAGGAATTTTTATCAATAAATGTCATGGGGCGTGTTCTTCAGAATATATAGTTATTTTC AACAAATGCCAGGCTAGATTCCTCACATGTGGCTATTTCTTATGTAAGAAGCTTTTAACTGAAGTTGGCATGTTTCGTAAAACTTGCGTG TCTTTTAAAAATAATAAAAGGAAGATGAGTATTTATGAAGAATATGTGCTGACAACAGGGCTTATGAGGTCTATGTACCTTAATCTCGTT TCTCCTTACCACAATCTTAAATAGATTTCAGCTGAAAATAATCAGTTCTTATGAAAACAAATAGAGAAATATCAGTAAGTCAAATCTGTT >In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_3045nt ATTCTCCTGCCTCAGCCTCCCGAGTTGCTGGGACTACAGGGGTGCACCACCTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGAACG GGGTTTCACCGTGTTAGCCAGGATGGCCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCTGCCCAAAGTGCTGGGATTACAGGCGT GAGCCACCGCGCCCGGCCGAAAGGGGGGATATTAATCATTACTCCAGGACGACAGAGGGAAAATCGCTTTGTACTGGACAAACTGGAATG TCTGACCAACCATTATAAAGTGCACGGAGTGGGAGGAGGAATAGGGACATTTTAATTGTATTTCTAAAAAGTATCTTCTGTGGTGAATCG GAAACAAAACTCATTCTTTACCACAGGCAGTTTAAGCGCTGCCTGAAAGATCGAAGGACGGTAAACCACAGACGTGAGAAACGGAACTTT GCGAAAACGCAGTCGTTTTATGTACCGGCTACTCATTGGAGTTACACCAGAGACTCACTACTGGAGTTCATCAGCCAATCCAAAGTCCAA GCGTGAGAGCCAGAGCCTGTAGGAGAGACCTGGGCAGGCCTCAGACCTGAGGAGTGGAGCTCCGCATCACTCAACCCTGGGGGCGGAGCT AGCCCAGGCTCCCACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCAC ACTCGTTTTCTTTTTGGCTGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCA GCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACA ACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAA GGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAG TCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCC TGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTAT TCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGC TGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAA AACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAAGGGTGCTCCAAGTCACGGCCACTAGGTTGTCT TCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTTAGAATAAAATGTCACTGTAAGATCACAAGCCT GTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGTTGTTGCAAAAATCAGTGCCCTAAAGAGCTTCC TTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAACCAGAAGGTAAAACTTAGATGTCCTTGTAAAAG AATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGTGACACAACGTGCAAGGAAATGAAGCGGAAAGC ATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAACAGGCTGAACTAGAAGCTTTTGAAAACAGACT GAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTATGGCAAAAACATAAATATTATCTCATTTCAGT GTGTGGAGTTGTGGTTGTAGTGTTTGCCTGGTACATCACCCATGATGTCAATTAAAAAAAGTTTTGATCTTTTAATGTAACTCAGATTGG ATTTAGATAAGTTGTTAAATTTGAAATATTAGAAAATGTATATTATAGAACATGATATATATTTACATTCATCTCTGTATTCTCTCAGCT GTTGTTAGAAGGACAGAATGTTAAACTTTATCTTAATTAGTATACTAGAAAGGGCAGTATAATACTGTTTTAAAGTGAAGGCATGACTGA AACTAAAATATTTCATAAGGCTTAGCTAGAGGCAGAGTAACGTGTTTTTGTTCATTGGGCTTCCTTGTACTTAGTTTTTTCATTTAATAA TTCAAACCAACACTTTTAAAAAAATAATTCAGATGAGACTGAGCCATATCTGCAGTAAGAGAAATATTTCTTAATGTTTTGGTTACTTAT GATAGAGTACTTTTCTTGATACTGTTAACTTTGTGCTTTTTAAAAAAAGTGATTCTCTAACAGACCTCTTAAATTGTGACATGAAGGTAT GTAATTAGATTTCAGAAATTGGTTTATTAGTGAGGAATTTTTATCAATAAATGTCATGGGGCGTGTTCTTCAGAATATATAGTTATTTTC AACAAATGCCAGGCTAGATTCCTCACATGTGGCTATTTCTTATGTAAGAAGCTTTTAACTGAAGTTGGCATGTTTCGTAAAACTTGCGTG TCTTTTAAAAATAATAAAAGGAAGATGAGTATTTATGAAGAATATGTGCTGACAACAGGGCTTATGAGGTCTATGTACCTTAATCTCGTT TCTCCTTACCACAATCTTAAATAGATTTCAGCTGAAAATAATCAGTTCTTATGAAAACAAATAGAGAAATATCAGTAAGTCAAATCTGTT >In-frame_COPS4_ENST00000509093_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_1591nt ATTCTCCTGCCTCAGCCTCCCGAGTTGCTGGGACTACAGGGGTGCACCACCTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGAACG GGGTTTCACCGTGTTAGCCAGGATGGCCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCTGCCCAAAGTGCTGGGATTACAGGCGT GAGCCACCGCGCCCGGCCGAAAGGGGGGATATTAATCATTACTCCAGGACGACAGAGGGAAAATCGCTTTGTACTGGACAAACTGGAATG TCTGACCAACCATTATAAAGTGCACGGAGTGGGAGGAGGAATAGGGACATTTTAATTGTATTTCTAAAAAGTATCTTCTGTGGTGAATCG GAAACAAAACTCATTCTTTACCACAGGCAGTTTAAGCGCTGCCTGAAAGATCGAAGGACGGTAAACCACAGACGTGAGAAACGGAACTTT GCGAAAACGCAGTCGTTTTATGTACCGGCTACTCATTGGAGTTACACCAGAGACTCACTACTGGAGTTCATCAGCCAATCCAAAGTCCAA GCGTGAGAGCCAGAGCCTGTAGGAGAGACCTGGGCAGGCCTCAGACCTGAGGAGTGGAGCTCCGCATCACTCAACCCTGGGGGCGGAGCT AGCCCAGGCTCCCACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCAC ACTCGTTTTCTTTTTGGCTGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCA GCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACA ACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAA GGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAG TCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCC TGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTAT TCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGC TGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAA AACTGATGGCTGCACTGGAAAAAACAAGATAGGGAAACTGAAGCTCTGTGATTTGTCCATGATTCTGCAACAGGAGAGTAGCAAATCAGA >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_2405nt ACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCACACTCGTTTTCTTT TTGGCTGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCG AGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTG AAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCC TGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACAT CGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCAT GATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTA CCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTAC TCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGC ACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAAGGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATT TTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTTAGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGT AGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGTTGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGA TGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAACCAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAA TTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGTGACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAA GAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAACAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGG AAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTATGGCAAAAACATAAATATTATCTCATTTCAGTGTGTGGAGTTGTG GTTGTAGTGTTTGCCTGGTACATCACCCATGATGTCAATTAAAAAAAGTTTTGATCTTTTAATGTAACTCAGATTGGATTTAGATAAGTT GTTAAATTTGAAATATTAGAAAATGTATATTATAGAACATGATATATATTTACATTCATCTCTGTATTCTCTCAGCTGTTGTTAGAAGGA CAGAATGTTAAACTTTATCTTAATTAGTATACTAGAAAGGGCAGTATAATACTGTTTTAAAGTGAAGGCATGACTGAAACTAAAATATTT CATAAGGCTTAGCTAGAGGCAGAGTAACGTGTTTTTGTTCATTGGGCTTCCTTGTACTTAGTTTTTTCATTTAATAATTCAAACCAACAC TTTTAAAAAAATAATTCAGATGAGACTGAGCCATATCTGCAGTAAGAGAAATATTTCTTAATGTTTTGGTTACTTATGATAGAGTACTTT TCTTGATACTGTTAACTTTGTGCTTTTTAAAAAAAGTGATTCTCTAACAGACCTCTTAAATTGTGACATGAAGGTATGTAATTAGATTTC AGAAATTGGTTTATTAGTGAGGAATTTTTATCAATAAATGTCATGGGGCGTGTTCTTCAGAATATATAGTTATTTTCAACAAATGCCAGG CTAGATTCCTCACATGTGGCTATTTCTTATGTAAGAAGCTTTTAACTGAAGTTGGCATGTTTCGTAAAACTTGCGTGTCTTTTAAAAATA ATAAAAGGAAGATGAGTATTTATGAAGAATATGTGCTGACAACAGGGCTTATGAGGTCTATGTACCTTAATCTCGTTTCTCCTTACCACA ATCTTAAATAGATTTCAGCTGAAAATAATCAGTTCTTATGAAAACAAATAGAGAAATATCAGTAAGTCAAATCTGTTTGAATTATAATTC >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_2402nt ACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCACACTCGTTTTCTTT TTGGCTGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCG AGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTG AAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCC TGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACAT CGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCAT GATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTA CCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTAC TCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGC ACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAAGGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATT TTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTTAGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGT AGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGTTGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGA TGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAACCAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAA TTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGTGACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAA GAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAACAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGG AAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTATGGCAAAAACATAAATATTATCTCATTTCAGTGTGTGGAGTTGTG GTTGTAGTGTTTGCCTGGTACATCACCCATGATGTCAATTAAAAAAAGTTTTGATCTTTTAATGTAACTCAGATTGGATTTAGATAAGTT GTTAAATTTGAAATATTAGAAAATGTATATTATAGAACATGATATATATTTACATTCATCTCTGTATTCTCTCAGCTGTTGTTAGAAGGA CAGAATGTTAAACTTTATCTTAATTAGTATACTAGAAAGGGCAGTATAATACTGTTTTAAAGTGAAGGCATGACTGAAACTAAAATATTT CATAAGGCTTAGCTAGAGGCAGAGTAACGTGTTTTTGTTCATTGGGCTTCCTTGTACTTAGTTTTTTCATTTAATAATTCAAACCAACAC TTTTAAAAAAATAATTCAGATGAGACTGAGCCATATCTGCAGTAAGAGAAATATTTCTTAATGTTTTGGTTACTTATGATAGAGTACTTT TCTTGATACTGTTAACTTTGTGCTTTTTAAAAAAAGTGATTCTCTAACAGACCTCTTAAATTGTGACATGAAGGTATGTAATTAGATTTC AGAAATTGGTTTATTAGTGAGGAATTTTTATCAATAAATGTCATGGGGCGTGTTCTTCAGAATATATAGTTATTTTCAACAAATGCCAGG CTAGATTCCTCACATGTGGCTATTTCTTATGTAAGAAGCTTTTAACTGAAGTTGGCATGTTTCGTAAAACTTGCGTGTCTTTTAAAAATA ATAAAAGGAAGATGAGTATTTATGAAGAATATGTGCTGACAACAGGGCTTATGAGGTCTATGTACCTTAATCTCGTTTCTCCTTACCACA ATCTTAAATAGATTTCAGCTGAAAATAATCAGTTCTTATGAAAACAAATAGAGAAATATCAGTAAGTCAAATCTGTTTGAATTATAATTC >In-frame_COPS4_ENST00000264389_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_948nt ACACCCGACGCTCTGGCCCACACAGACGCTACTCTGTAGCATCTCAGGTTCCCTCTGGCTGCACTCTGGAGGACCACACTCGTTTTCTTT TTGGCTGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCG AGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTG AAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCC TGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACAT CGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCAT GATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTA CCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTAC TCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGC ACTGGAAAAAACAAGATAGGGAAACTGAAGCTCTGTGATTTGTCCATGATTCTGCAACAGGAGAGTAGCAAATCAGAAAGTACTGTGCCT >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_2288nt CGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGC AAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGC TATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCA CCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCA TGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGC AGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATT CCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATC TTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAA TGCCTTCATTGTGAGGAAGGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCA CCTTGTGTTCAGATGCTTAGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAAT GAAAAGAACCTCCTCAGTTGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAA TGTCCCTTTAACTGCAACCAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAAT CAGGTTTCAATAGAATGTGACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAA GAAGAAAAACGAAGACAACAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTG GCAGTTGAGCTATCACTATGGCAAAAACATAAATATTATCTCATTTCAGTGTGTGGAGTTGTGGTTGTAGTGTTTGCCTGGTACATCACC CATGATGTCAATTAAAAAAAGTTTTGATCTTTTAATGTAACTCAGATTGGATTTAGATAAGTTGTTAAATTTGAAATATTAGAAAATGTA TATTATAGAACATGATATATATTTACATTCATCTCTGTATTCTCTCAGCTGTTGTTAGAAGGACAGAATGTTAAACTTTATCTTAATTAG TATACTAGAAAGGGCAGTATAATACTGTTTTAAAGTGAAGGCATGACTGAAACTAAAATATTTCATAAGGCTTAGCTAGAGGCAGAGTAA CGTGTTTTTGTTCATTGGGCTTCCTTGTACTTAGTTTTTTCATTTAATAATTCAAACCAACACTTTTAAAAAAATAATTCAGATGAGACT GAGCCATATCTGCAGTAAGAGAAATATTTCTTAATGTTTTGGTTACTTATGATAGAGTACTTTTCTTGATACTGTTAACTTTGTGCTTTT TAAAAAAAGTGATTCTCTAACAGACCTCTTAAATTGTGACATGAAGGTATGTAATTAGATTTCAGAAATTGGTTTATTAGTGAGGAATTT TTATCAATAAATGTCATGGGGCGTGTTCTTCAGAATATATAGTTATTTTCAACAAATGCCAGGCTAGATTCCTCACATGTGGCTATTTCT TATGTAAGAAGCTTTTAACTGAAGTTGGCATGTTTCGTAAAACTTGCGTGTCTTTTAAAAATAATAAAAGGAAGATGAGTATTTATGAAG AATATGTGCTGACAACAGGGCTTATGAGGTCTATGTACCTTAATCTCGTTTCTCCTTACCACAATCTTAAATAGATTTCAGCTGAAAATA ATCAGTTCTTATGAAAACAAATAGAGAAATATCAGTAAGTCAAATCTGTTTGAATTATAATTCCTTTCAAATAGTTTTGCTATTTAATTT >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_2285nt CGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGC AAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGC TATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCA CCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCA TGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGC AGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATT CCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATC TTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAA TGCCTTCATTGTGAGGAAGGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCA CCTTGTGTTCAGATGCTTAGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAAT GAAAAGAACCTCCTCAGTTGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAA TGTCCCTTTAACTGCAACCAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAAT CAGGTTTCAATAGAATGTGACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAA GAAGAAAAACGAAGACAACAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTG GCAGTTGAGCTATCACTATGGCAAAAACATAAATATTATCTCATTTCAGTGTGTGGAGTTGTGGTTGTAGTGTTTGCCTGGTACATCACC CATGATGTCAATTAAAAAAAGTTTTGATCTTTTAATGTAACTCAGATTGGATTTAGATAAGTTGTTAAATTTGAAATATTAGAAAATGTA TATTATAGAACATGATATATATTTACATTCATCTCTGTATTCTCTCAGCTGTTGTTAGAAGGACAGAATGTTAAACTTTATCTTAATTAG TATACTAGAAAGGGCAGTATAATACTGTTTTAAAGTGAAGGCATGACTGAAACTAAAATATTTCATAAGGCTTAGCTAGAGGCAGAGTAA CGTGTTTTTGTTCATTGGGCTTCCTTGTACTTAGTTTTTTCATTTAATAATTCAAACCAACACTTTTAAAAAAATAATTCAGATGAGACT GAGCCATATCTGCAGTAAGAGAAATATTTCTTAATGTTTTGGTTACTTATGATAGAGTACTTTTCTTGATACTGTTAACTTTGTGCTTTT TAAAAAAAGTGATTCTCTAACAGACCTCTTAAATTGTGACATGAAGGTATGTAATTAGATTTCAGAAATTGGTTTATTAGTGAGGAATTT TTATCAATAAATGTCATGGGGCGTGTTCTTCAGAATATATAGTTATTTTCAACAAATGCCAGGCTAGATTCCTCACATGTGGCTATTTCT TATGTAAGAAGCTTTTAACTGAAGTTGGCATGTTTCGTAAAACTTGCGTGTCTTTTAAAAATAATAAAAGGAAGATGAGTATTTATGAAG AATATGTGCTGACAACAGGGCTTATGAGGTCTATGTACCTTAATCTCGTTTCTCCTTACCACAATCTTAAATAGATTTCAGCTGAAAATA ATCAGTTCTTATGAAAACAAATAGAGAAATATCAGTAAGTCAAATCTGTTTGAATTATAATTCCTTTCAAATAGTTTTGCTATTTAATTT >In-frame_COPS4_ENST00000503682_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_831nt CGCTGAGCTGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGC AAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGC TATCCCTGCCCAGAAACCGTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCA CCCAAGTGCAAGGAGCAATGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCA TGTCATCAACCTTGCCAAAAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGC AGGCACCAGCCTACAGGCCCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATT CCTATGGAATGTCTTGGGAAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATC TTGGATTGTCAGAATCACACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGATAGGGAAACTG AAGCTCTGTGATTTGTCCATGATTCTGCAACAGGAGAGTAGCAAATCAGAAAGTACTGTGCCTGATCTTTTAACTCCCAGCCCAATGTGC >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000381538_chr4_47888016_-_2270nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA TGGCAAAAACATAAATATTATCTCATTTCAGTGTGTGGAGTTGTGGTTGTAGTGTTTGCCTGGTACATCACCCATGATGTCAATTAAAAA AAGTTTTGATCTTTTAATGTAACTCAGATTGGATTTAGATAAGTTGTTAAATTTGAAATATTAGAAAATGTATATTATAGAACATGATAT ATATTTACATTCATCTCTGTATTCTCTCAGCTGTTGTTAGAAGGACAGAATGTTAAACTTTATCTTAATTAGTATACTAGAAAGGGCAGT ATAATACTGTTTTAAAGTGAAGGCATGACTGAAACTAAAATATTTCATAAGGCTTAGCTAGAGGCAGAGTAACGTGTTTTTGTTCATTGG GCTTCCTTGTACTTAGTTTTTTCATTTAATAATTCAAACCAACACTTTTAAAAAAATAATTCAGATGAGACTGAGCCATATCTGCAGTAA GAGAAATATTTCTTAATGTTTTGGTTACTTATGATAGAGTACTTTTCTTGATACTGTTAACTTTGTGCTTTTTAAAAAAAGTGATTCTCT AACAGACCTCTTAAATTGTGACATGAAGGTATGTAATTAGATTTCAGAAATTGGTTTATTAGTGAGGAATTTTTATCAATAAATGTCATG GGGCGTGTTCTTCAGAATATATAGTTATTTTCAACAAATGCCAGGCTAGATTCCTCACATGTGGCTATTTCTTATGTAAGAAGCTTTTAA CTGAAGTTGGCATGTTTCGTAAAACTTGCGTGTCTTTTAAAAATAATAAAAGGAAGATGAGTATTTATGAAGAATATGTGCTGACAACAG GGCTTATGAGGTCTATGTACCTTAATCTCGTTTCTCCTTACCACAATCTTAAATAGATTTCAGCTGAAAATAATCAGTTCTTATGAAAAC AAATAGAGAAATATCAGTAAGTCAAATCTGTTTGAATTATAATTCCTTTCAAATAGTTTTGCTATTTAATTTATATGATTAATGTTTTCA >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000507489_chr4_47888016_-_2267nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGGCTGGCCCAGAATGCCTTCATTGTGAGGAA GGGTGCTCCAAGTCACGGCCACTAGGTTGTCTTCACCCATGTATTTTGCGATGTCACCCTGGAGAATGTCCACCTTGTGTTCAGATGCTT AGAATAAAATGTCACTGTAAGATCACAAGCCTGTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGAAAAGAACCTCCTCAGT TGTTGCAAAAATCAGTGCCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAGATGTGTCATCCTGGTGAATGTCCCTTTAACTGCAAC CAGAAGGTAAAACTTAGATGTCCTTGTAAAAGAATAAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGGTTTCAATAGAATGT GACACAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAA CAGGCTGAACTAGAAGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAAAGAGATGAAGTGGCAGTTGAGCTATCACTA TGGCAAAAACATAAATATTATCTCATTTCAGTGTGTGGAGTTGTGGTTGTAGTGTTTGCCTGGTACATCACCCATGATGTCAATTAAAAA AAGTTTTGATCTTTTAATGTAACTCAGATTGGATTTAGATAAGTTGTTAAATTTGAAATATTAGAAAATGTATATTATAGAACATGATAT ATATTTACATTCATCTCTGTATTCTCTCAGCTGTTGTTAGAAGGACAGAATGTTAAACTTTATCTTAATTAGTATACTAGAAAGGGCAGT ATAATACTGTTTTAAAGTGAAGGCATGACTGAAACTAAAATATTTCATAAGGCTTAGCTAGAGGCAGAGTAACGTGTTTTTGTTCATTGG GCTTCCTTGTACTTAGTTTTTTCATTTAATAATTCAAACCAACACTTTTAAAAAAATAATTCAGATGAGACTGAGCCATATCTGCAGTAA GAGAAATATTTCTTAATGTTTTGGTTACTTATGATAGAGTACTTTTCTTGATACTGTTAACTTTGTGCTTTTTAAAAAAAGTGATTCTCT AACAGACCTCTTAAATTGTGACATGAAGGTATGTAATTAGATTTCAGAAATTGGTTTATTAGTGAGGAATTTTTATCAATAAATGTCATG GGGCGTGTTCTTCAGAATATATAGTTATTTTCAACAAATGCCAGGCTAGATTCCTCACATGTGGCTATTTCTTATGTAAGAAGCTTTTAA CTGAAGTTGGCATGTTTCGTAAAACTTGCGTGTCTTTTAAAAATAATAAAAGGAAGATGAGTATTTATGAAGAATATGTGCTGACAACAG GGCTTATGAGGTCTATGTACCTTAATCTCGTTTCTCCTTACCACAATCTTAAATAGATTTCAGCTGAAAATAATCAGTTCTTATGAAAAC AAATAGAGAAATATCAGTAAGTCAAATCTGTTTGAATTATAATTCCTTTCAAATAGTTTTGCTATTTAATTTATATGATTAATGTTTTCA >In-frame_COPS4_ENST00000511653_chr4_83966858_+_NFXL1_ENST00000329043_chr4_47888016_-_813nt ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTG GAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAAGCAGTTGCTATCCCTGCCCAGAAACC GTAGATGTGAAGTGTAATTGTGGCAATACAAAGGTGACAGTGCCCTGTGGCCGAGAACGTACCACAAGACCACCCAAGTGCAAGGAGCAA TGCAGTCGACCACCAACTTGTCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGTTCTTGTCCACCATGTCATCAACCTTGCCAA AAAGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCGTGTCATGATCAAGCATTAATAAAGCAGACTGGCAGGCACCAGCCTACAGGC CCTTGGGAACAGCCTTCTGAGCCAGCATTTATTCAGACTGCATTACCGTGTCCTCCATGTCAAGTTCCTATTCCTATGGAATGTCTTGGG AAACATGAGGTGAGTCCACTACCATGCCATGCTGTAGGACCCTACTCTTGTAAAAGAGTTTGTGGAAGAATCTTGGATTGTCAGAATCAC ACATGTATGAAAGAATGCCACAAAGTAACCAAAACTGATGGCTGCACTGGAAAAAACAAGATAGGGAAACTGAAGCTCTGTGATTTGTCC ATGATTCTGCAACAGGAGAGTAGCAAATCAGAAAGTACTGTGCCTGATCTTTTAACTCCCAGCCCAATGTGCTCTTCTACTCATGTTATT |
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FusionGenePPI for COPS4_NFXL1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
COPS4 | RCBTB2, CCDC85B, USHBP1, C19orf57, MBIP, WRAP73, COPS8, COPS5, COPS6, BTRC, KLHL13, DDB1, CUL4A, COPS3, CUL1, UBC, IKBKB, IRF8, GPS1, COPS2, NEDD8, COPS7A, DDB2, ERCC8, VPRBP, CUL3, CUL4B, CUL5, CUL2, DCUN1D1, PTPN14, TOR1A, SNAPIN, STON2, ERCC6, GRK5, LRR1, DDA1, RFWD2, COPS7B, RBX1, SKP1, FBXO17, TCEB2, TCEB1, FEM1B, LRRC14, BTBD1, BTBD2, KLHL42, KLHL18, DCAF11, DTL, CRBN, TOR1AIP2, IRF5, FBXW4, BAG3, FOS, YWHAQ, FBXO6, CAST, DCAF8, ENAH, EPB41L1, EPB41L2, HSP90AB1, KPNA2, PRMT5, WDR77, STIP1, MOV10, NXF1, STK11, GUCY1A3, TP53, CSNK2A1, EIF3M, NTRK1, KRAS, IBTK, FGFR1OP, HEMGN, APBB3, DET1, UBE2M, FBXO7, KLHL10, DCAF4, DENR, DLD, DCAF4L2, SIRT7 | NFXL1 | SARM1, ILF3, CLINT1, RNF2, WDFY2, FOXL1, AURKA |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for COPS4_NFXL1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for COPS4_NFXL1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | NFXL1 | C0008370 | Cholestasis | 1 | CTD_human |
Tgene | NFXL1 | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |