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Fusion gene ID: 7954 |
FusionGeneSummary for COL4A1_ZNF675 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: COL4A1_ZNF675 | Fusion gene ID: 7954 | Hgene | Tgene | Gene symbol | COL4A1 | ZNF675 | Gene ID | 1282 | 171392 |
| Gene name | collagen type IV alpha 1 chain | zinc finger protein 675 | |
| Synonyms | BSVD|RATOR | TBZF|TIZ | |
| Cytomap | 13q34 | 19p12 | |
| Type of gene | protein-coding | protein-coding | |
| Description | collagen alpha-1(IV) chainCOL4A1 NC1 domainarrestencollagen IV, alpha-1 polypeptidecollagen of basement membrane, alpha-1 chain | zinc finger protein 675TRAF6 inhibitory zinc fingerTRAF6-binding zinc finger proteinTRAF6-inhibitory zinc finger protein | |
| Modification date | 20180527 | 20180519 | |
| UniProtAcc | P02462 | Q8TD23 | |
| Ensembl transtripts involved in fusion gene | ENST00000375820, ENST00000543140, ENST00000467182, | ENST00000601935, ENST00000600313, ENST00000596211, ENST00000359788, ENST00000601010, ENST00000599168, | |
| Fusion gene scores | * DoF score | 7 X 9 X 5=315 | 3 X 2 X 3=18 |
| # samples | 9 | 3 | |
| ** MAII score | log2(9/315*10)=-1.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: COL4A1 [Title/Abstract] AND ZNF675 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | ZNF675 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 11751921 |
| Tgene | ZNF675 | GO:0007249 | I-kappaB kinase/NF-kappaB signaling | 11751921 |
| Tgene | ZNF675 | GO:0010804 | negative regulation of tumor necrosis factor-mediated signaling pathway | 11751921 |
| Tgene | ZNF675 | GO:0019221 | cytokine-mediated signaling pathway | 11751921 |
| Tgene | ZNF675 | GO:0032088 | negative regulation of NF-kappaB transcription factor activity | 11751921 |
| Tgene | ZNF675 | GO:0043508 | negative regulation of JUN kinase activity | 11751921 |
| Tgene | ZNF675 | GO:0045671 | negative regulation of osteoclast differentiation | 11751921|11851921 |
| Tgene | ZNF675 | GO:0046329 | negative regulation of JNK cascade | 11751921 |
| Tgene | ZNF675 | GO:2000660 | negative regulation of interleukin-1-mediated signaling pathway | 11751921 |
| Tgene | ZNF675 | GO:2000678 | negative regulation of transcription regulatory region DNA binding | 11751921 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | PAAD | TCGA-2J-AABP-01A | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000375820 | ENST00000601935 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000375820 | ENST00000600313 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000375820 | ENST00000596211 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000375820 | ENST00000359788 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000375820 | ENST00000601010 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000375820 | ENST00000599168 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000543140 | ENST00000601935 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000543140 | ENST00000600313 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000543140 | ENST00000596211 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000543140 | ENST00000359788 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000543140 | ENST00000601010 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| In-frame | ENST00000543140 | ENST00000599168 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| intron-3CDS | ENST00000467182 | ENST00000601935 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| intron-3CDS | ENST00000467182 | ENST00000600313 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| intron-3CDS | ENST00000467182 | ENST00000596211 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| intron-3CDS | ENST00000467182 | ENST00000359788 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| intron-3CDS | ENST00000467182 | ENST00000601010 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
| intron-3CDS | ENST00000467182 | ENST00000599168 | COL4A1 | chr13 | 110959291 | - | ZNF675 | chr19 | 23845960 | - |
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FusionProtFeatures for COL4A1_ZNF675 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| COL4A1 | ZNF675 |
| May be involved in transcriptional regulation. May playa role during osteoclast differentiation by modulating TRAF6signaling activity. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 4_75 | 1 | 569 | Domain | KRAB |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 144_166 | 1 | 569 | Zinc finger | C2H2-type 1%3B degenerate |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 172_194 | 1 | 569 | Zinc finger | C2H2-type 2%3B degenerate |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 200_222 | 1 | 569 | Zinc finger | C2H2-type 3%3B degenerate |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 228_250 | 1 | 569 | Zinc finger | C2H2-type 4%3B degenerate |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 256_278 | 1 | 569 | Zinc finger | C2H2-type 5 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 284_306 | 1 | 569 | Zinc finger | C2H2-type 6 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 312_334 | 1 | 569 | Zinc finger | C2H2-type 7 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 340_362 | 1 | 569 | Zinc finger | C2H2-type 8 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 368_390 | 1 | 569 | Zinc finger | C2H2-type 9 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 396_418 | 1 | 569 | Zinc finger | C2H2-type 10 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 424_446 | 1 | 569 | Zinc finger | C2H2-type 11 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 452_474 | 1 | 569 | Zinc finger | C2H2-type 12 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 480_502 | 1 | 569 | Zinc finger | C2H2-type 13 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 508_530 | 1 | 569 | Zinc finger | C2H2-type 14 |
| Tgene | >ZNF675 | chr13:110959291 | chr19:23845960 | ENST00000359788 | - | 0 | 4 | 536_558 | 1 | 569 | Zinc finger | C2H2-type 15 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >COL4A1 | chr13:110959291 | chr19:23845960 | ENST00000375820 | - | 1 | 52 | 1445_1669 | 28 | 1670 | Domain | Collagen IV NC1 |
| Hgene | >COL4A1 | chr13:110959291 | chr19:23845960 | ENST00000375820 | - | 1 | 52 | 173_1440 | 28 | 1670 | Region | Note=Triple-helical region |
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FusionGeneSequence for COL4A1_ZNF675 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000601935_chr19_23845960_-_145aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000600313_chr19_23845960_-_146aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000596211_chr19_23845960_-_107aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000359788_chr19_23845960_-_596aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL TVKRHEMVNEPPVMCSHFAQEFWPEQNIKDSFEKVTLRRYEKCGNDNFQLKGCKSVDECKLHKGGYNGLNQCLPTMQSKMFQCDKYVKVF NKFSHSDRHKIKHMENKPFKCKECGRSFCMLSHLTRHERNYTKVNFCKCEECEKAVNQSSKLTKHKRIYTCEKLYKCQECDRTFNQFSNL TEYKKDYAREKPYKCEECGKAFNQSSHLTTHKIIHTGEKPYKCEECGKAFNQFSNLTTHKKIHTGEQPYICEECGKAFTQSSTLTTHKRI HTGEKPYKCEECGKAFNRSSKLTEHKNIHTGEQPYKCEECGKAFNRSSNLTEHRKIHTEEKPYKCKECGKAFKHSSALTTHKRIHTGEKP YKCEECGKAFNRSSKLTEHKKLHTGKKPYKCEECGKAFIQSSKLTEHKKIHSGEIPYKCEECGKAFKHSSSLTTHKRIHTGEKPYKCEEC >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000601010_chr19_23845960_-_129aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000599168_chr19_23845960_-_105aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000601935_chr19_23845960_-_145aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000600313_chr19_23845960_-_146aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000596211_chr19_23845960_-_107aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000359788_chr19_23845960_-_596aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL TVKRHEMVNEPPVMCSHFAQEFWPEQNIKDSFEKVTLRRYEKCGNDNFQLKGCKSVDECKLHKGGYNGLNQCLPTMQSKMFQCDKYVKVF NKFSHSDRHKIKHMENKPFKCKECGRSFCMLSHLTRHERNYTKVNFCKCEECEKAVNQSSKLTKHKRIYTCEKLYKCQECDRTFNQFSNL TEYKKDYAREKPYKCEECGKAFNQSSHLTTHKIIHTGEKPYKCEECGKAFNQFSNLTTHKKIHTGEQPYICEECGKAFTQSSTLTTHKRI HTGEKPYKCEECGKAFNRSSKLTEHKNIHTGEQPYKCEECGKAFNRSSNLTEHRKIHTEEKPYKCKECGKAFKHSSALTTHKRIHTGEKP YKCEECGKAFNRSSKLTEHKKLHTGKKPYKCEECGKAFIQSSKLTEHKKIHSGEIPYKCEECGKAFKHSSSLTTHKRIHTGEKPYKCEEC >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000601010_chr19_23845960_-_129aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000599168_chr19_23845960_-_105aa MGPRLSVWLLLLPAALLLHEEHSRAAAKGLLTFRDVAIEFSLEEWQCLDTAQRNLYKNVILENYRNLVFLGIAVSKQDLITCLEQEKEPL |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000601935_chr19_23845960_-_435nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGATCTGTGGGACAGACCCAGCAGGTGGTGCCCCATGTAAGAAGCAATGAAATG >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000600313_chr19_23845960_-_438nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGTCTCCCTCTGATGCCGAGCCGAAGCTGGACTGTACTGCTGCCATCTCTGCTC >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000596211_chr19_23845960_-_321nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000359788_chr19_23845960_-_1788nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGTAATGTGTTCTCATTTTGCCCAAGAGTTTTGGCCAGAGCAGAACATAAAAGAT TCTTTTGAAAAAGTGACACTGAGAAGATATGAAAAATGTGGAAATGATAATTTTCAGTTAAAAGGCTGTAAAAGTGTGGATGAATGTAAG TTGCACAAGGGAGGTTATAATGGACTTAACCAATGTTTACCAACTATGCAGAGCAAAATGTTTCAATGTGATAAATATGTGAAAGTCTTT AATAAATTTTCACATTCAGATAGACATAAGATAAAACATATGGAAAATAAACCTTTCAAATGTAAAGAATGTGGCAGATCATTTTGCATG CTTTCACACCTAACTCGACATGAAAGAAATTATACCAAGGTGAATTTCTGCAAATGTGAAGAATGTGAAAAAGCTGTTAACCAATCTTCA AAGCTTACTAAACATAAAAGAATTTATACTTGTGAGAAACTCTACAAATGTCAAGAATGTGACAGAACTTTTAACCAATTCTCAAACCTT ACTGAATATAAAAAAGATTATGCTCGAGAGAAACCATACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTCACACCTTACTACA CATAAGATAATTCATACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAATCTTACTACACATAAA AAAATTCATACTGGAGAGCAACCCTACATATGTGAAGAATGTGGCAAGGCTTTTACCCAATCCTCAACCCTTACTACACATAAGAGAATT CATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGAAAAGCTTTTAACCGATCCTCAAAACTTACTGAACATAAAAACATTCATACT GGAGAGCAACCCTACAAATGTGAGGAATGCGGCAAAGCTTTTAACCGATCCTCAAATCTTACGGAACATAGGAAAATTCATACCGAAGAG AAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAAACACTCCTCAGCCCTTACTACACATAAGAGAATTCACACTGGAGAGAAACCC TACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGATCCTCAAAACTTACTGAACATAAGAAACTTCATACTGGAAAGAAACCCTACAAA TGTGAAGAATGTGGCAAAGCTTTTATCCAATCCTCAAAACTTACTGAACATAAGAAAATTCATTCTGGAGAGATACCCTACAAGTGTGAA GAATGTGGCAAAGCTTTTAAACACTCCTCATCCCTTACTACACATAAAAGAATTCATACTGGGGAGAAACCCTACAAATGTGAAGAATGT GGCAAAGCTTTTAGCCGATCCTCAAAACTTACTGAACATAAGATAATTCATACTGGAGAGAAACCCTATAAATGTGAGAGATGTGACAAA >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000601010_chr19_23845960_-_387nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGAGTCTCGCCCTGTCGTCCAGCCTGAAGTTCAGTGGTACAATCTCTGCTTACTG >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000599168_chr19_23845960_-_315nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000601935_chr19_23845960_-_435nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGATCTGTGGGACAGACCCAGCAGGTGGTGCCCCATGTAAGAAGCAATGAAATG >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000600313_chr19_23845960_-_438nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGTCTCCCTCTGATGCCGAGCCGAAGCTGGACTGTACTGCTGCCATCTCTGCTC >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000596211_chr19_23845960_-_321nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000359788_chr19_23845960_-_1788nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGTAATGTGTTCTCATTTTGCCCAAGAGTTTTGGCCAGAGCAGAACATAAAAGAT TCTTTTGAAAAAGTGACACTGAGAAGATATGAAAAATGTGGAAATGATAATTTTCAGTTAAAAGGCTGTAAAAGTGTGGATGAATGTAAG TTGCACAAGGGAGGTTATAATGGACTTAACCAATGTTTACCAACTATGCAGAGCAAAATGTTTCAATGTGATAAATATGTGAAAGTCTTT AATAAATTTTCACATTCAGATAGACATAAGATAAAACATATGGAAAATAAACCTTTCAAATGTAAAGAATGTGGCAGATCATTTTGCATG CTTTCACACCTAACTCGACATGAAAGAAATTATACCAAGGTGAATTTCTGCAAATGTGAAGAATGTGAAAAAGCTGTTAACCAATCTTCA AAGCTTACTAAACATAAAAGAATTTATACTTGTGAGAAACTCTACAAATGTCAAGAATGTGACAGAACTTTTAACCAATTCTCAAACCTT ACTGAATATAAAAAAGATTATGCTCGAGAGAAACCATACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTCACACCTTACTACA CATAAGATAATTCATACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAATCTTACTACACATAAA AAAATTCATACTGGAGAGCAACCCTACATATGTGAAGAATGTGGCAAGGCTTTTACCCAATCCTCAACCCTTACTACACATAAGAGAATT CATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGAAAAGCTTTTAACCGATCCTCAAAACTTACTGAACATAAAAACATTCATACT GGAGAGCAACCCTACAAATGTGAGGAATGCGGCAAAGCTTTTAACCGATCCTCAAATCTTACGGAACATAGGAAAATTCATACCGAAGAG AAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAAACACTCCTCAGCCCTTACTACACATAAGAGAATTCACACTGGAGAGAAACCC TACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGATCCTCAAAACTTACTGAACATAAGAAACTTCATACTGGAAAGAAACCCTACAAA TGTGAAGAATGTGGCAAAGCTTTTATCCAATCCTCAAAACTTACTGAACATAAGAAAATTCATTCTGGAGAGATACCCTACAAGTGTGAA GAATGTGGCAAAGCTTTTAAACACTCCTCATCCCTTACTACACATAAAAGAATTCATACTGGGGAGAAACCCTACAAATGTGAAGAATGT GGCAAAGCTTTTAGCCGATCCTCAAAACTTACTGAACATAAGATAATTCATACTGGAGAGAAACCCTATAAATGTGAGAGATGTGACAAA >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000601010_chr19_23845960_-_387nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG ACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGAGTCTCGCCCTGTCGTCCAGCCTGAAGTTCAGTGGTACAATCTCTGCTTACTG >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000599168_chr19_23845960_-_315nt ATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCGCTGCGAAGGGACTG TTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTATATAAAAATGTGATT TTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTTG |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000601935_chr19_23845960_-_1483nt GCTTGGAGCCGCCGCACCCGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGG CAGCCGTCCCTCGCCGCCTCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACG AGGAGCACAGCCGGGCCGCTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACA CTGCACAGCGGAATTTATATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGA TCACCTGTCTGGAGCAAGAAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGATCTGTGGGACAGACCCAGC AGGTGGTGCCCCATGTAAGAAGCAATGAAATGCATCATGATGGAACCCTCAAAAACGAAAGTGAAGTTACTGCACACCCCTTAGGTCCTC TTTGGATTCCAGCATGATGCATCAAACCTTACCACGGCATGACTAGGGCCCAACCTGCTACCAGAAATAAAGGAAATGACGATGCAGAAC CCACAACCCTGGATGATGTGGCTTCCTTGGATGACACAGGCCCCAGACATTACCTGGGGAATGCTGAAGAACACAACTCAGGAGGCTGAA CAAATCTGCTTCAGACACAGATACCATTCAATCCATATAATTTGTTCTTTGCTATGCTTTTTATTCCACATTGCAACTCTTATAGAATAC TGATTCTTCTTATTCTCTCTTTTTGCCTGCAACCCACACCTGCTATAAACTATTGGGCCCATCTTCTAGATCTGCCTTTCTTACGGCATT TTACTTGGGAAGGTACCCCCTTCTCAGCCTCTGACAACGTGACCAATTGGCTGGGAGGTATTGACTTACCCCCGGTGGGGTCCCTCAGTA ATGGCACACATTGGACTCAGGTGCCAAGTAACATTACATATCAATCCTTGATTGGAAAAGAATAATATTGATTATACTCATGTTTGTCTT ATGTTATTTACTGGTTCTAGGGTGCAAAGCTGGAACACAAACTGTAACCATTGCACCAGTCAAACCTGTCGCTGCTCAGATCTGTATGCT TCAATCAACAAAACCTGATGCAAAAAAACAGAAAAAGGGGAGATGTGGGAGATTGGTCAGAGTGGTGGAAAAAGGATAGGGAAAGAACGC AAATTTTCTGAAATGTTGGAAGGTCCTGCAGAGCTCCAGGGGAGAATAGCTGAAGGCAGCTGTTCTATAACCCTGAGGCAGAGAGCAAGC AGTAGGTACAAGGGAGTGTGGAAGAATTTATCTTAAACAGGCTTATTTACTTATGTTGATCAGGAACTGACCTTTGATCATTTGCGTGTG >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000600313_chr19_23845960_-_567nt GCTTGGAGCCGCCGCACCCGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGG CAGCCGTCCCTCGCCGCCTCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACG AGGAGCACAGCCGGGCCGCTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACA CTGCACAGCGGAATTTATATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGA TCACCTGTCTGGAGCAAGAAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGTCTCCCTCTGATGCCGAGCC GAAGCTGGACTGTACTGCTGCCATCTCTGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAG >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000596211_chr19_23845960_-_605nt GCTTGGAGCCGCCGCACCCGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGG CAGCCGTCCCTCGCCGCCTCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACG AGGAGCACAGCCGGGCCGCTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACA CTGCACAGCGGAATTTATATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGA TCACCTGTCTGGAGCAAGAAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGCCAAAAGCAATAGCCGATTT GGATACCATCAAGACACCTGAAACCTTATCATGAGCCAGATGCCAAGGAAGAGACTCTGGGAGGATCCCAAGGACCCCCTGGTTGCAGCC >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000359788_chr19_23845960_-_2335nt GCTTGGAGCCGCCGCACCCGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGG CAGCCGTCCCTCGCCGCCTCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACG AGGAGCACAGCCGGGCCGCTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACA CTGCACAGCGGAATTTATATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGA TCACCTGTCTGGAGCAAGAAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGTAATGTGTTCTCATTTTGCCC AAGAGTTTTGGCCAGAGCAGAACATAAAAGATTCTTTTGAAAAAGTGACACTGAGAAGATATGAAAAATGTGGAAATGATAATTTTCAGT TAAAAGGCTGTAAAAGTGTGGATGAATGTAAGTTGCACAAGGGAGGTTATAATGGACTTAACCAATGTTTACCAACTATGCAGAGCAAAA TGTTTCAATGTGATAAATATGTGAAAGTCTTTAATAAATTTTCACATTCAGATAGACATAAGATAAAACATATGGAAAATAAACCTTTCA AATGTAAAGAATGTGGCAGATCATTTTGCATGCTTTCACACCTAACTCGACATGAAAGAAATTATACCAAGGTGAATTTCTGCAAATGTG AAGAATGTGAAAAAGCTGTTAACCAATCTTCAAAGCTTACTAAACATAAAAGAATTTATACTTGTGAGAAACTCTACAAATGTCAAGAAT GTGACAGAACTTTTAACCAATTCTCAAACCTTACTGAATATAAAAAAGATTATGCTCGAGAGAAACCATACAAATGTGAAGAATGTGGCA AAGCCTTTAACCAGTCCTCACACCTTACTACACATAAGATAATTCATACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCT TTAACCAGTTCTCAAATCTTACTACACATAAAAAAATTCATACTGGAGAGCAACCCTACATATGTGAAGAATGTGGCAAGGCTTTTACCC AATCCTCAACCCTTACTACACATAAGAGAATTCATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGAAAAGCTTTTAACCGATCCT CAAAACTTACTGAACATAAAAACATTCATACTGGAGAGCAACCCTACAAATGTGAGGAATGCGGCAAAGCTTTTAACCGATCCTCAAATC TTACGGAACATAGGAAAATTCATACCGAAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAAACACTCCTCAGCCCTTACTA CACATAAGAGAATTCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGATCCTCAAAACTTACTGAACATA AGAAACTTCATACTGGAAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTATCCAATCCTCAAAACTTACTGAACATAAGAAAA TTCATTCTGGAGAGATACCCTACAAGTGTGAAGAATGTGGCAAAGCTTTTAAACACTCCTCATCCCTTACTACACATAAAAGAATTCATA CTGGGGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCGATCCTCAAAACTTACTGAACATAAGATAATTCATACTGGAG AGAAACCCTATAAATGTGAGAGATGTGACAAAGCTTTTAACCAATCTGCAAACCTTACTAAACATAAAAAAATACATACTGGAGAGAAAC TACAGAACTGGAATGTGTGATAATGATTTTGACAACACCTCAAATTTTTCTAAATATAAAGGAAATCATACTGGTGAAAAATTCTAGAAA TGTAAAGAATGTGTCAAAGACTTTAAATGGTTTTCACACTTCATTGTATGTAAGATAATTCATACTGGAGAAAACTACAAGTGTGAAGAA TTTGGCAATACTGTTAATTAAGGCTCAAACCTTATTGCACAGGAAAGCGTTTATACTTAAGAAAAATTGTACAAATATAAAGAGTGTAAA ATAGCCATTAATATCTGTTGACATCTTAATATCAGAATGTTGGTACTTAATAAAAGCATTATAAATGCAATTACTGTCTAAAGACTTTAA >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000601010_chr19_23845960_-_717nt GCTTGGAGCCGCCGCACCCGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGG CAGCCGTCCCTCGCCGCCTCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACG AGGAGCACAGCCGGGCCGCTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACA CTGCACAGCGGAATTTATATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGA TCACCTGTCTGGAGCAAGAAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGAGTCTCGCCCTGTCGTCCAGC CTGAAGTTCAGTGGTACAATCTCTGCTTACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGG ACTATAGGCACATGCCACCATGCCTGACTAATTTTTGTACTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAAGCTGGTCTTGAACTC >In-frame_COL4A1_ENST00000375820_chr13_110959291_-_ZNF675_ENST00000599168_chr19_23845960_-_608nt GCTTGGAGCCGCCGCACCCGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGG CAGCCGTCCCTCGCCGCCTCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACG AGGAGCACAGCCGGGCCGCTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACA CTGCACAGCGGAATTTATATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGA TCACCTGTCTGGAGCAAGAAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGTAAGTGAGAATGAAAGTGAA TACAACAGGTGACACTGATGAGAGGTCCAAAGGTCAAAGAGAAAGCCAGTCCTTAAAATGTGATTTGGGAAGCCGTGTTTTAAAGGAAAT >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000601935_chr19_23845960_-_1465nt CGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGGCAGCCGTCCCTCGCCGCC TCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCG CTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTAT ATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAG AAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGATCTGTGGGACAGACCCAGCAGGTGGTGCCCCATGTAA GAAGCAATGAAATGCATCATGATGGAACCCTCAAAAACGAAAGTGAAGTTACTGCACACCCCTTAGGTCCTCTTTGGATTCCAGCATGAT GCATCAAACCTTACCACGGCATGACTAGGGCCCAACCTGCTACCAGAAATAAAGGAAATGACGATGCAGAACCCACAACCCTGGATGATG TGGCTTCCTTGGATGACACAGGCCCCAGACATTACCTGGGGAATGCTGAAGAACACAACTCAGGAGGCTGAACAAATCTGCTTCAGACAC AGATACCATTCAATCCATATAATTTGTTCTTTGCTATGCTTTTTATTCCACATTGCAACTCTTATAGAATACTGATTCTTCTTATTCTCT CTTTTTGCCTGCAACCCACACCTGCTATAAACTATTGGGCCCATCTTCTAGATCTGCCTTTCTTACGGCATTTTACTTGGGAAGGTACCC CCTTCTCAGCCTCTGACAACGTGACCAATTGGCTGGGAGGTATTGACTTACCCCCGGTGGGGTCCCTCAGTAATGGCACACATTGGACTC AGGTGCCAAGTAACATTACATATCAATCCTTGATTGGAAAAGAATAATATTGATTATACTCATGTTTGTCTTATGTTATTTACTGGTTCT AGGGTGCAAAGCTGGAACACAAACTGTAACCATTGCACCAGTCAAACCTGTCGCTGCTCAGATCTGTATGCTTCAATCAACAAAACCTGA TGCAAAAAAACAGAAAAAGGGGAGATGTGGGAGATTGGTCAGAGTGGTGGAAAAAGGATAGGGAAAGAACGCAAATTTTCTGAAATGTTG GAAGGTCCTGCAGAGCTCCAGGGGAGAATAGCTGAAGGCAGCTGTTCTATAACCCTGAGGCAGAGAGCAAGCAGTAGGTACAAGGGAGTG TGGAAGAATTTATCTTAAACAGGCTTATTTACTTATGTTGATCAGGAACTGACCTTTGATCATTTGCGTGTGTGACATTCCCTGAAAGGG >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000600313_chr19_23845960_-_549nt CGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGGCAGCCGTCCCTCGCCGCC TCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCG CTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTAT ATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAG AAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGTCTCCCTCTGATGCCGAGCCGAAGCTGGACTGTACTGC TGCCATCTCTGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGTGCGCGCAGCCATGCCT >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000596211_chr19_23845960_-_587nt CGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGGCAGCCGTCCCTCGCCGCC TCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCG CTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTAT ATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAG AAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGCCAAAAGCAATAGCCGATTTGGATACCATCAAGACACC TGAAACCTTATCATGAGCCAGATGCCAAGGAAGAGACTCTGGGAGGATCCCAAGGACCCCCTGGTTGCAGCCATGTCAAGACTGACACTG >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000359788_chr19_23845960_-_2317nt CGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGGCAGCCGTCCCTCGCCGCC TCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCG CTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTAT ATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAG AAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGTAATGTGTTCTCATTTTGCCCAAGAGTTTTGGCCAGAGC AGAACATAAAAGATTCTTTTGAAAAAGTGACACTGAGAAGATATGAAAAATGTGGAAATGATAATTTTCAGTTAAAAGGCTGTAAAAGTG TGGATGAATGTAAGTTGCACAAGGGAGGTTATAATGGACTTAACCAATGTTTACCAACTATGCAGAGCAAAATGTTTCAATGTGATAAAT ATGTGAAAGTCTTTAATAAATTTTCACATTCAGATAGACATAAGATAAAACATATGGAAAATAAACCTTTCAAATGTAAAGAATGTGGCA GATCATTTTGCATGCTTTCACACCTAACTCGACATGAAAGAAATTATACCAAGGTGAATTTCTGCAAATGTGAAGAATGTGAAAAAGCTG TTAACCAATCTTCAAAGCTTACTAAACATAAAAGAATTTATACTTGTGAGAAACTCTACAAATGTCAAGAATGTGACAGAACTTTTAACC AATTCTCAAACCTTACTGAATATAAAAAAGATTATGCTCGAGAGAAACCATACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCT CACACCTTACTACACATAAGATAATTCATACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAATC TTACTACACATAAAAAAATTCATACTGGAGAGCAACCCTACATATGTGAAGAATGTGGCAAGGCTTTTACCCAATCCTCAACCCTTACTA CACATAAGAGAATTCATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGAAAAGCTTTTAACCGATCCTCAAAACTTACTGAACATA AAAACATTCATACTGGAGAGCAACCCTACAAATGTGAGGAATGCGGCAAAGCTTTTAACCGATCCTCAAATCTTACGGAACATAGGAAAA TTCATACCGAAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAAACACTCCTCAGCCCTTACTACACATAAGAGAATTCACA CTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGATCCTCAAAACTTACTGAACATAAGAAACTTCATACTGGAA AGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTATCCAATCCTCAAAACTTACTGAACATAAGAAAATTCATTCTGGAGAGATAC CCTACAAGTGTGAAGAATGTGGCAAAGCTTTTAAACACTCCTCATCCCTTACTACACATAAAAGAATTCATACTGGGGAGAAACCCTACA AATGTGAAGAATGTGGCAAAGCTTTTAGCCGATCCTCAAAACTTACTGAACATAAGATAATTCATACTGGAGAGAAACCCTATAAATGTG AGAGATGTGACAAAGCTTTTAACCAATCTGCAAACCTTACTAAACATAAAAAAATACATACTGGAGAGAAACTACAGAACTGGAATGTGT GATAATGATTTTGACAACACCTCAAATTTTTCTAAATATAAAGGAAATCATACTGGTGAAAAATTCTAGAAATGTAAAGAATGTGTCAAA GACTTTAAATGGTTTTCACACTTCATTGTATGTAAGATAATTCATACTGGAGAAAACTACAAGTGTGAAGAATTTGGCAATACTGTTAAT TAAGGCTCAAACCTTATTGCACAGGAAAGCGTTTATACTTAAGAAAAATTGTACAAATATAAAGAGTGTAAAATAGCCATTAATATCTGT TGACATCTTAATATCAGAATGTTGGTACTTAATAAAAGCATTATAAATGCAATTACTGTCTAAAGACTTTAAGAAAATATAAGCCTTTAA >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000601010_chr19_23845960_-_699nt CGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGGCAGCCGTCCCTCGCCGCC TCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCG CTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTAT ATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAG AAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGAGTCTCGCCCTGTCGTCCAGCCTGAAGTTCAGTGGTACA ATCTCTGCTTACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTATAGGCACATGCCAC CATGCCTGACTAATTTTTGTACTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAAGCTGGTCTTGAACTCCTGACCTCGTGATCCATC >In-frame_COL4A1_ENST00000543140_chr13_110959291_-_ZNF675_ENST00000599168_chr19_23845960_-_590nt CGGGACGGTGCGTAGCGCTGGAAGTCCGGCCTTCCGAGAGCTAGCTGTCCGCCGCGGCCCCCGCACGCCGGGCAGCCGTCCCTCGCCGCC TCGGGCGCGCCACCATGGGGCCCCGGCTCAGCGTCTGGCTGCTGCTGCTGCCCGCCGCCCTTCTGCTCCACGAGGAGCACAGCCGGGCCG CTGCGAAGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAAGAATGGCAATGCCTGGACACTGCACAGCGGAATTTAT ATAAAAATGTGATTTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCAAGACCTGATCACCTGTCTGGAGCAAG AAAAAGAGCCTTTGACTGTGAAGAGACATGAGATGGTGAATGAACCCCCAGGTAAGTGAGAATGAAAGTGAATACAACAGGTGACACTGA TGAGAGGTCCAAAGGTCAAAGAGAAAGCCAGTCCTTAAAATGTGATTTGGGAAGCCGTGTTTTAAAGGAAATAATTTCTGGAAAGCCTGA |
Top |
FusionGenePPI for COL4A1_ZNF675 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| COL4A1 | DISC1, NID1, NID2, COL4A2, COL4A1, THBS1, COL7A1, MAG, VHL, PDGFA, PDGFB, ACHE, KIFAP3, PLOD1, COLGALT2, MMP9, MMP2, TINAG | ZNF675 | TRAF6, TNFSF11, IL1B, LMO4 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for COL4A1_ZNF675 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for COL4A1_ZNF675 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | COL4A1 | C4013035 | BRAIN SMALL VESSEL DISEASE WITH OR WITHOUT OCULAR ANOMALIES | 8 | ORPHANET;UNIPROT |
| Hgene | COL4A1 | C1867983 | PORENCEPHALY, FAMILIAL | 3 | ORPHANET;UNIPROT |
| Hgene | COL4A1 | C2673195 | Angiopathy, Hereditary, With Nephropathy, Aneurysms, And Muscle Cramps | 3 | CTD_human;ORPHANET;UNIPROT |
| Hgene | COL4A1 | C0017668 | Focal glomerulosclerosis | 2 | CTD_human |
| Hgene | COL4A1 | C0011881 | Diabetic Nephropathy | 1 | CTD_human |
| Hgene | COL4A1 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
| Hgene | COL4A1 | C0027726 | Nephrotic Syndrome | 1 | CTD_human |
| Hgene | COL4A1 | C0266484 | Schizencephaly | 1 | HPO;ORPHANET;UNIPROT |
| Hgene | COL4A1 | C3281105 | HEMORRHAGE, INTRACEREBRAL, SUSCEPTIBILITY TO | 1 | UNIPROT |
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