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Fusion gene ID: 7651 |
FusionGeneSummary for CNDP2_RPL9 |
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Fusion gene information | Fusion gene name: CNDP2_RPL9 | Fusion gene ID: 7651 | Hgene | Tgene | Gene symbol | CNDP2 | RPL9 | Gene ID | 55748 | 6133 |
Gene name | carnosine dipeptidase 2 | ribosomal protein L9 | |
Synonyms | CN2|CPGL|HEL-S-13|HsT2298|PEPA | L9|NPC-A-16 | |
Cytomap | 18q22.3 | 4p14 | |
Type of gene | protein-coding | protein-coding | |
Description | cytosolic non-specific dipeptidaseCNDP dipeptidase 2 (metallopeptidase M20 family)carnosinase-2carnosine dipeptidase IIcytosolic nonspecific dipeptidaseepididymis secretory protein Li 13glutamate carboxypeptidase-like protein 1peptidase A | 60S ribosomal protein L9large ribosomal subunit protein uL6 | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q96KP4 | P32969 | |
Ensembl transtripts involved in fusion gene | ENST00000324262, ENST00000579847, ENST00000580229, ENST00000324301, | ENST00000295955, ENST00000449470, | |
Fusion gene scores | * DoF score | 6 X 6 X 2=72 | 1 X 1 X 1=1 |
# samples | 7 | 1 | |
** MAII score | log2(7/72*10)=-0.0406419844973459 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: CNDP2 [Title/Abstract] AND RPL9 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BF814523 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-3CDS | ENST00000324262 | ENST00000295955 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
5UTR-3CDS | ENST00000324262 | ENST00000449470 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
5UTR-3CDS | ENST00000579847 | ENST00000295955 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
5UTR-3CDS | ENST00000579847 | ENST00000449470 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
3UTR-3CDS | ENST00000580229 | ENST00000295955 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
3UTR-3CDS | ENST00000580229 | ENST00000449470 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
intron-3CDS | ENST00000324301 | ENST00000295955 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
intron-3CDS | ENST00000324301 | ENST00000449470 | CNDP2 | chr18 | 72163620 | - | RPL9 | chr4 | 39456258 | - |
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FusionProtFeatures for CNDP2_RPL9 |
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Hgene | Tgene |
CNDP2 | RPL9 |
Hydrolyzes a variety of dipeptides including L-carnosinebut has a strong preference for Cys-Gly (PubMed:19346245). Acts asa functional tumor suppressor in gastric cancer via activation ofthe mitogen-activated protein kinase (MAPK) pathway. An elevatedlevel of CNDP2 activates the p38 and JNK MAPK pathways to inducecell apoptosis, and a lower level of CNDP2 activates the ERK MAPKpathway to promote cell proliferation (PubMed:24395568). Isoform 2may play a role as tumor suppressor in hepatocellular carcinoma(HCC) cells (PubMed:17121880). Catalyzes the production of N-lactoyl-amino acids from lactate and amino acids by reverseproteolysis (PubMed:25964343). {ECO:0000269|PubMed:17121880,ECO:0000269|PubMed:19346245, ECO:0000269|PubMed:24395568,ECO:0000269|PubMed:25964343}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for CNDP2_RPL9 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for CNDP2_RPL9 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CNDP2_RPL9 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CNDP2_RPL9 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CNDP2 | C0011881 | Diabetic Nephropathy | 1 | CTD_human |
Hgene | CNDP2 | C0015695 | Fatty Liver | 1 | CTD_human |