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Fusion gene ID: 6992 |
FusionGeneSummary for CHD6_ABHD12 |
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Fusion gene information | Fusion gene name: CHD6_ABHD12 | Fusion gene ID: 6992 | Hgene | Tgene | Gene symbol | CHD6 | ABHD12 | Gene ID | 84181 | 26090 |
Gene name | chromodomain helicase DNA binding protein 6 | abhydrolase domain containing 12 | |
Synonyms | CHD-6|CHD5|RIGB | ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2 | |
Cytomap | 20q12 | 20p11.21 | |
Type of gene | protein-coding | protein-coding | |
Description | chromodomain-helicase-DNA-binding protein 6ATP-dependent helicase CHD6helicase C-terminal domain- and SNF2 N-terminal domain-containing proteinradiation-induced gene B protein | monoacylglycerol lipase ABHD122-arachidonoylglycerol hydrolaseabhydrolase domain-containing protein 12 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q8TD26 | Q8N2K0 | |
Ensembl transtripts involved in fusion gene | ENST00000373233, ENST00000309279, ENST00000373222, ENST00000480022, | ENST00000376542, ENST00000339157, ENST00000481556, | |
Fusion gene scores | * DoF score | 22 X 14 X 10=3080 | 3 X 2 X 3=18 |
# samples | 25 | 3 | |
** MAII score | log2(25/3080*10)=-3.62293035092018 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: CHD6 [Title/Abstract] AND ABHD12 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | ABHD12 | GO:0046464 | acylglycerol catabolic process | 22969151 |
Tgene | ABHD12 | GO:0046475 | glycerophospholipid catabolic process | 25290914 |
Tgene | ABHD12 | GO:0052651 | monoacylglycerol catabolic process | 25290914 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUAD | TCGA-86-7954-01A | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000373233 | ENST00000376542 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
Frame-shift | ENST00000373233 | ENST00000339157 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
5CDS-intron | ENST00000373233 | ENST00000481556 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
Frame-shift | ENST00000309279 | ENST00000376542 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
Frame-shift | ENST00000309279 | ENST00000339157 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
5CDS-intron | ENST00000309279 | ENST00000481556 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
In-frame | ENST00000373222 | ENST00000376542 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
In-frame | ENST00000373222 | ENST00000339157 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
5CDS-intron | ENST00000373222 | ENST00000481556 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
intron-3CDS | ENST00000480022 | ENST00000376542 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
intron-3CDS | ENST00000480022 | ENST00000339157 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
intron-intron | ENST00000480022 | ENST00000481556 | CHD6 | chr20 | 40141485 | - | ABHD12 | chr20 | 25304066 | - |
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FusionProtFeatures for CHD6_ABHD12 |
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Hgene | Tgene |
CHD6 | ABHD12 |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for CHD6_ABHD12 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_CHD6_ENST00000373222_chr20_40141485_-_ABHD12_ENST00000376542_chr20_25304066_-_618aa MCQSHMIGFCTSSVNEETETQGDQISCPNPTTLVFRTQISSLPSLQLSNLKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVASHC LPQKDLYTAEEEAATLFPRKMTSHNGMEDSGGGGTGVKKKRKKKEPGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKEP KQKDGAKKARKPREASGTKEAKEKRSCTDSAARTKSRKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLTNPSLRSPEESTESTDSQK RRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEXEFPISLIXKNHRIKVXITRVTTTCSQRKTXPLESGTPSLQ SGGRTPKAKTRCGMRMPWLPATLSFCTCMGTQVPEEATTAWSFTRCXVPLVTMWSPLTTEVGVTQWERHLSGAXPMTHSTFLTGSKQEVV TTPCTSGATLWALAWRQIWCGASVSERRLQMPLYWNLHSLISAKKLRAIHFQXYIDTSLGLTGSSLILLQVVELNLQMMKTXSTSPVPCS >In-frame_CHD6_ENST00000373222_chr20_40141485_-_ABHD12_ENST00000339157_chr20_25304066_-_612aa MCQSHMIGFCTSSVNEETETQGDQISCPNPTTLVFRTQISSLPSLQLSNLKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVASHC LPQKDLYTAEEEAATLFPRKMTSHNGMEDSGGGGTGVKKKRKKKEPGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKEP KQKDGAKKARKPREASGTKEAKEKRSCTDSAARTKSRKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLTNPSLRSPEESTESTDSQK RRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEXEFPISLIXKNHRIKVXITRVTTTCSQRKTXPLESGTPSLQ SGGRTPKAKTRCGMRMPWLPATLSFCTCMGTQVPEEATTAWSFTRCXVPLVTMWSPLTTEVGVTQWERHLSGAXPMTHSTFLTGSKQEVV TTPCTSGATLWALAWRQIWCGASVSERRLQMPLYWNLHSLISAKKLRAIHFQXYIDTSLGLTGSSLILLQVVELNLQMMKTXSTSPVPCS |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_CHD6_ENST00000373222_chr20_40141485_-_ABHD12_ENST00000376542_chr20_25304066_-_1856nt ATGTGTCAGTCTCATATGATTGGCTTTTGTACCAGTTCTGTAAATGAAGAAACTGAGACCCAGGGAGATCAAATAAGTTGCCCAAATCCC ACAACGCTTGTGTTCAGAACCCAGATATCTTCACTCCCAAGTCTACAGTTGTCAAATTTAAAAGTTTTGAATCACTCCCCAATGTCTGAT GCCTCTGTCAATTTTGACTACAAATCTCCATCCCCATTTGACTGCAGCACTGATCAAGAAGAGAAAATTGAAGATGTTGCTAGTCACTGT CTGCCTCAGAAGGACCTGTATACTGCTGAAGAGGAAGCTGCTACCCTTTTTCCTAGGAAAATGACATCCCATAATGGGATGGAGGACAGT GGAGGAGGAGGTACTGGAGTGAAGAAGAAACGGAAGAAAAAGGAGCCAGGAGACCAAGAGGGTGCAGCAAAGGGAAGCAAGGACAGAGAG CCCAAGCCAAAGAGGAAACGAGAACCGAAAGAGCCAAAGGAACCCAGAAAGGCCAAGGAGCCGAAGAAGGCCAAGGAGCACAAGGAGCCG AAGCAAAAAGATGGGGCAAAGAAGGCACGGAAGCCCCGGGAGGCCTCGGGCACCAAGGAGGCCAAAGAGAAGAGGAGCTGCACTGACTCT GCAGCCAGGACGAAGTCCAGGAAGGCCAGCAAGGAGCAAGGACCAACCCCAGTGGAGAAAAAGAAGAAAGGAAAAAGGAAAAGTGAAACT ACAGTGGAGAGTTTAGAGCTGGATCAGGGCCTGACGAACCCATCTCTGCGGAGTCCTGAGGAGTCCACTGAGTCTACAGACAGCCAGAAA CGACGCTCGGGAAGGCAAGTAAAGCGCAGAAAATACAATGAGGACCTGGACTTCAAAGTGGTGGATGATGATGGGGAAACAATTGCTGTT CTTGGAGCTGGTCGAACATCTGCACTCTCAGCCTCTACACTGGCCTGGCAGGCGGAGTAAGAGTTCCCTATTTCATTGATTTGAAAAAAC CACAGGATCAAGGTTTGAATCACACGTGTAACTACTACCTGCAGCCAGAGGAAGACGTGACCATTGGAGTCTGGCACACCGTCCCTGCAG TCTGGTGGAAGAACGCCCAAGGCAAAGACCAGATGTGGTATGAGGATGCCTTGGCTTCCAGCCACCCTATCATTCTGTACCTGCATGGGA ACGCAGGTACCAGAGGAGGCGACCACCGCGTGGAGCTTTACAAGGTGCTGAGTTCCCTTGGTTACCATGTGGTCACCTTTGACTACAGAG GTTGGGGTGACTCAGTGGGAACGCCATCTGAGCGGGGCATGACCTATGACGCACTCCACGTTTTTGACTGGATCAAAGCAAGAAGTGGTG ACAACCCCGTGTACATCTGGGGCCACTCTCTGGGCACTGGCGTGGCGACAAATCTGGTGCGGCGCCTCTGTGAGCGAGAGACGCCTCCAG ATGCCCTTATATTGGAATCTCCATTCACTAATATCCGCGAAGAAGCTAAGAGCCATCCATTTTCAGTGATATATCGATACTTCCCTGGGT TTGACTGGTTCTTCCTTGATCCTATTACAAGTAGTGGAATTAAATTTGCAAATGATGAAAACGTGAAGCACATCTCCTGTCCCCTGCTCA TCCTGCACGCTGAGGACGACCCGGTGGTGCCCTTCCAGCTTGGCAGAAAGCTCTATAGCATCGCCGCACCAGCTCGAAGCTTCCGAGATT TCAAAGTTCAGTTTGTGCCCTTTCATTCAGACCTTGGCTACAGGCACAAATACATTTACAAGAGCCCTGAGCTGCCACGGATACTGAGAC >In-frame_CHD6_ENST00000373222_chr20_40141485_-_ABHD12_ENST00000339157_chr20_25304066_-_1838nt ATGTGTCAGTCTCATATGATTGGCTTTTGTACCAGTTCTGTAAATGAAGAAACTGAGACCCAGGGAGATCAAATAAGTTGCCCAAATCCC ACAACGCTTGTGTTCAGAACCCAGATATCTTCACTCCCAAGTCTACAGTTGTCAAATTTAAAAGTTTTGAATCACTCCCCAATGTCTGAT GCCTCTGTCAATTTTGACTACAAATCTCCATCCCCATTTGACTGCAGCACTGATCAAGAAGAGAAAATTGAAGATGTTGCTAGTCACTGT CTGCCTCAGAAGGACCTGTATACTGCTGAAGAGGAAGCTGCTACCCTTTTTCCTAGGAAAATGACATCCCATAATGGGATGGAGGACAGT GGAGGAGGAGGTACTGGAGTGAAGAAGAAACGGAAGAAAAAGGAGCCAGGAGACCAAGAGGGTGCAGCAAAGGGAAGCAAGGACAGAGAG CCCAAGCCAAAGAGGAAACGAGAACCGAAAGAGCCAAAGGAACCCAGAAAGGCCAAGGAGCCGAAGAAGGCCAAGGAGCACAAGGAGCCG AAGCAAAAAGATGGGGCAAAGAAGGCACGGAAGCCCCGGGAGGCCTCGGGCACCAAGGAGGCCAAAGAGAAGAGGAGCTGCACTGACTCT GCAGCCAGGACGAAGTCCAGGAAGGCCAGCAAGGAGCAAGGACCAACCCCAGTGGAGAAAAAGAAGAAAGGAAAAAGGAAAAGTGAAACT ACAGTGGAGAGTTTAGAGCTGGATCAGGGCCTGACGAACCCATCTCTGCGGAGTCCTGAGGAGTCCACTGAGTCTACAGACAGCCAGAAA CGACGCTCGGGAAGGCAAGTAAAGCGCAGAAAATACAATGAGGACCTGGACTTCAAAGTGGTGGATGATGATGGGGAAACAATTGCTGTT CTTGGAGCTGGTCGAACATCTGCACTCTCAGCCTCTACACTGGCCTGGCAGGCGGAGTAAGAGTTCCCTATTTCATTGATTTGAAAAAAC CACAGGATCAAGGTTTGAATCACACGTGTAACTACTACCTGCAGCCAGAGGAAGACGTGACCATTGGAGTCTGGCACACCGTCCCTGCAG TCTGGTGGAAGAACGCCCAAGGCAAAGACCAGATGTGGTATGAGGATGCCTTGGCTTCCAGCCACCCTATCATTCTGTACCTGCATGGGA ACGCAGGTACCAGAGGAGGCGACCACCGCGTGGAGCTTTACAAGGTGCTGAGTTCCCTTGGTTACCATGTGGTCACCTTTGACTACAGAG GTTGGGGTGACTCAGTGGGAACGCCATCTGAGCGGGGCATGACCTATGACGCACTCCACGTTTTTGACTGGATCAAAGCAAGAAGTGGTG ACAACCCCGTGTACATCTGGGGCCACTCTCTGGGCACTGGCGTGGCGACAAATCTGGTGCGGCGCCTCTGTGAGCGAGAGACGCCTCCAG ATGCCCTTATATTGGAATCTCCATTCACTAATATCCGCGAAGAAGCTAAGAGCCATCCATTTTCAGTGATATATCGATACTTCCCTGGGT TTGACTGGTTCTTCCTTGATCCTATTACAAGTAGTGGAATTAAATTTGCAAATGATGAAAACGTGAAGCACATCTCCTGTCCCCTGCTCA TCCTGCACGCTGAGGACGACCCGGTGGTGCCCTTCCAGCTTGGCAGAAAGCTCTATAGCATCGCCGCACCAGCTCGAAGCTTCCGAGATT TCAAAGTTCAGTTTGTGCCCTTTCATTCAGACCTTGGCTACAGGCACAAATACATTTACAAGAGCCCTGAGCTGCCACGGATACTGAGGG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_CHD6_ENST00000373222_chr20_40141485_-_ABHD12_ENST00000376542_chr20_25304066_-_2125nt CTGTTTGTATTTTGGCTGCTGCAGGAGCCATTTTAGCCCATGTGTCAGTCTCATATGATTGGCTTTTGTACCAGTTCTGTAAATGAAGAA ACTGAGACCCAGGGAGATCAAATAAGTTGCCCAAATCCCACAACGCTTGTGTTCAGAACCCAGATATCTTCACTCCCAAGTCTACAGTTG TCAAATTTAAAAGTTTTGAATCACTCCCCAATGTCTGATGCCTCTGTCAATTTTGACTACAAATCTCCATCCCCATTTGACTGCAGCACT GATCAAGAAGAGAAAATTGAAGATGTTGCTAGTCACTGTCTGCCTCAGAAGGACCTGTATACTGCTGAAGAGGAAGCTGCTACCCTTTTT CCTAGGAAAATGACATCCCATAATGGGATGGAGGACAGTGGAGGAGGAGGTACTGGAGTGAAGAAGAAACGGAAGAAAAAGGAGCCAGGA GACCAAGAGGGTGCAGCAAAGGGAAGCAAGGACAGAGAGCCCAAGCCAAAGAGGAAACGAGAACCGAAAGAGCCAAAGGAACCCAGAAAG GCCAAGGAGCCGAAGAAGGCCAAGGAGCACAAGGAGCCGAAGCAAAAAGATGGGGCAAAGAAGGCACGGAAGCCCCGGGAGGCCTCGGGC ACCAAGGAGGCCAAAGAGAAGAGGAGCTGCACTGACTCTGCAGCCAGGACGAAGTCCAGGAAGGCCAGCAAGGAGCAAGGACCAACCCCA GTGGAGAAAAAGAAGAAAGGAAAAAGGAAAAGTGAAACTACAGTGGAGAGTTTAGAGCTGGATCAGGGCCTGACGAACCCATCTCTGCGG AGTCCTGAGGAGTCCACTGAGTCTACAGACAGCCAGAAACGACGCTCGGGAAGGCAAGTAAAGCGCAGAAAATACAATGAGGACCTGGAC TTCAAAGTGGTGGATGATGATGGGGAAACAATTGCTGTTCTTGGAGCTGGTCGAACATCTGCACTCTCAGCCTCTACACTGGCCTGGCAG GCGGAGTAAGAGTTCCCTATTTCATTGATTTGAAAAAACCACAGGATCAAGGTTTGAATCACACGTGTAACTACTACCTGCAGCCAGAGG AAGACGTGACCATTGGAGTCTGGCACACCGTCCCTGCAGTCTGGTGGAAGAACGCCCAAGGCAAAGACCAGATGTGGTATGAGGATGCCT TGGCTTCCAGCCACCCTATCATTCTGTACCTGCATGGGAACGCAGGTACCAGAGGAGGCGACCACCGCGTGGAGCTTTACAAGGTGCTGA GTTCCCTTGGTTACCATGTGGTCACCTTTGACTACAGAGGTTGGGGTGACTCAGTGGGAACGCCATCTGAGCGGGGCATGACCTATGACG CACTCCACGTTTTTGACTGGATCAAAGCAAGAAGTGGTGACAACCCCGTGTACATCTGGGGCCACTCTCTGGGCACTGGCGTGGCGACAA ATCTGGTGCGGCGCCTCTGTGAGCGAGAGACGCCTCCAGATGCCCTTATATTGGAATCTCCATTCACTAATATCCGCGAAGAAGCTAAGA GCCATCCATTTTCAGTGATATATCGATACTTCCCTGGGTTTGACTGGTTCTTCCTTGATCCTATTACAAGTAGTGGAATTAAATTTGCAA ATGATGAAAACGTGAAGCACATCTCCTGTCCCCTGCTCATCCTGCACGCTGAGGACGACCCGGTGGTGCCCTTCCAGCTTGGCAGAAAGC TCTATAGCATCGCCGCACCAGCTCGAAGCTTCCGAGATTTCAAAGTTCAGTTTGTGCCCTTTCATTCAGACCTTGGCTACAGGCACAAAT ACATTTACAAGAGCCCTGAGCTGCCACGGATACTGAGACCTCAGCAGGGCCCAGGTTCCAGCCCAGATCCCAGCATGTGGTCAGAGCTGG TGTGACTGAAGCCAACAGGTGACACGGTCATCGAAGAGCAGCAGACAAAACTAAAACTAACCCAAAGGCAGCTGAAAGTGGAGGGCAGGT GAATTCCCAGCCCTCGCCGGATTCAACTTTTGCCAACGGTGAAGAACTGCCCTGAGCTGCAAACCTTACAAAGTCTGTAACTCTAGATAA >In-frame_CHD6_ENST00000373222_chr20_40141485_-_ABHD12_ENST00000339157_chr20_25304066_-_2524nt CTGTTTGTATTTTGGCTGCTGCAGGAGCCATTTTAGCCCATGTGTCAGTCTCATATGATTGGCTTTTGTACCAGTTCTGTAAATGAAGAA ACTGAGACCCAGGGAGATCAAATAAGTTGCCCAAATCCCACAACGCTTGTGTTCAGAACCCAGATATCTTCACTCCCAAGTCTACAGTTG TCAAATTTAAAAGTTTTGAATCACTCCCCAATGTCTGATGCCTCTGTCAATTTTGACTACAAATCTCCATCCCCATTTGACTGCAGCACT GATCAAGAAGAGAAAATTGAAGATGTTGCTAGTCACTGTCTGCCTCAGAAGGACCTGTATACTGCTGAAGAGGAAGCTGCTACCCTTTTT CCTAGGAAAATGACATCCCATAATGGGATGGAGGACAGTGGAGGAGGAGGTACTGGAGTGAAGAAGAAACGGAAGAAAAAGGAGCCAGGA GACCAAGAGGGTGCAGCAAAGGGAAGCAAGGACAGAGAGCCCAAGCCAAAGAGGAAACGAGAACCGAAAGAGCCAAAGGAACCCAGAAAG GCCAAGGAGCCGAAGAAGGCCAAGGAGCACAAGGAGCCGAAGCAAAAAGATGGGGCAAAGAAGGCACGGAAGCCCCGGGAGGCCTCGGGC ACCAAGGAGGCCAAAGAGAAGAGGAGCTGCACTGACTCTGCAGCCAGGACGAAGTCCAGGAAGGCCAGCAAGGAGCAAGGACCAACCCCA GTGGAGAAAAAGAAGAAAGGAAAAAGGAAAAGTGAAACTACAGTGGAGAGTTTAGAGCTGGATCAGGGCCTGACGAACCCATCTCTGCGG AGTCCTGAGGAGTCCACTGAGTCTACAGACAGCCAGAAACGACGCTCGGGAAGGCAAGTAAAGCGCAGAAAATACAATGAGGACCTGGAC TTCAAAGTGGTGGATGATGATGGGGAAACAATTGCTGTTCTTGGAGCTGGTCGAACATCTGCACTCTCAGCCTCTACACTGGCCTGGCAG GCGGAGTAAGAGTTCCCTATTTCATTGATTTGAAAAAACCACAGGATCAAGGTTTGAATCACACGTGTAACTACTACCTGCAGCCAGAGG AAGACGTGACCATTGGAGTCTGGCACACCGTCCCTGCAGTCTGGTGGAAGAACGCCCAAGGCAAAGACCAGATGTGGTATGAGGATGCCT TGGCTTCCAGCCACCCTATCATTCTGTACCTGCATGGGAACGCAGGTACCAGAGGAGGCGACCACCGCGTGGAGCTTTACAAGGTGCTGA GTTCCCTTGGTTACCATGTGGTCACCTTTGACTACAGAGGTTGGGGTGACTCAGTGGGAACGCCATCTGAGCGGGGCATGACCTATGACG CACTCCACGTTTTTGACTGGATCAAAGCAAGAAGTGGTGACAACCCCGTGTACATCTGGGGCCACTCTCTGGGCACTGGCGTGGCGACAA ATCTGGTGCGGCGCCTCTGTGAGCGAGAGACGCCTCCAGATGCCCTTATATTGGAATCTCCATTCACTAATATCCGCGAAGAAGCTAAGA GCCATCCATTTTCAGTGATATATCGATACTTCCCTGGGTTTGACTGGTTCTTCCTTGATCCTATTACAAGTAGTGGAATTAAATTTGCAA ATGATGAAAACGTGAAGCACATCTCCTGTCCCCTGCTCATCCTGCACGCTGAGGACGACCCGGTGGTGCCCTTCCAGCTTGGCAGAAAGC TCTATAGCATCGCCGCACCAGCTCGAAGCTTCCGAGATTTCAAAGTTCAGTTTGTGCCCTTTCATTCAGACCTTGGCTACAGGCACAAAT ACATTTACAAGAGCCCTGAGCTGCCACGGATACTGAGGGAATTCCTGGGGAAGTCGGAGCCTGAGCACCAGCACTGAGCCTGGCCGTGGG AAGGAAGCATGAAGACCTCTGCCCTCCTCCCGTTTTCCTCCAGTCAGCAGCCCGGTATCCTGAAGCCCCGGGGGGCCGGCACCTGCAATG CTCAGGAGCCCAGCTCGCACCTGGAGAGCACCTCAGATCCCAGGCGGGGAGGCCCCTGCAGGCCTGCAGTGCCCGGAGGCCTGAGCATGG CTGTGTGGAAAGCGTGGGTGGCAGGCATGTGGCTCTCCTTGCCGCCCCTCAACCTGAGATCTTGTTGGGAGACTTAATGGCAGCAGGCAG CCATCACTGCCTGCTTGATGCTGCACTGAGCTGGACAGGGGGAGTCCGGGCAGGGGACTCTTGGGGCTCGGGACCATGCTGAGCTTTTTG GCACCACCCACAGAGAACGTGGGGTCCAGGTTCTTTCTGCACCTTCCCAGCACATGCAGAATGACTCCAGTGGTTCCATCGTCCCCTCCT GCCCTGTGTACCTGCTTGCCTTTCTCAGCTGCCCCACCTCCCCTGGGCTGGCCCACTCACCCACAGTGGAAGTGCCCGGGATCTGCACTT CCTCCCCTTTCACCTACCTGTACACCTAACCTGGCCTTAGACTGAGCTTTATTTAAGAATAAAATCGTGGTGGTGGTCCTTTTGTCTCTC |
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FusionGenePPI for CHD6_ABHD12 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
CHD6 | AIRE, ARAF, TOLLIP, CHD3, ATXN1L, ZFYVE9, SOX2, HIST3H3, HIST1H2BG, SEC16A, RACGAP1, PAPD5, CDCA5, ESR1, EGFR | ABHD12 | PEX19, SLC39A4, DPP9, TCTN2, TCTN3, SLC39A12, CPVL, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CHD6_ABHD12 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CHD6_ABHD12 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CHD6 | C0005695 | Bladder Neoplasm | 1 | CTD_human |
Hgene | CHD6 | C0007138 | Carcinoma, Transitional Cell | 1 | CTD_human |
Hgene | CHD6 | C0027819 | Neuroblastoma | 1 | CTD_human |