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Fusion gene ID: 6186 |
FusionGeneSummary for CD44_EXT2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CD44_EXT2 | Fusion gene ID: 6186 | Hgene | Tgene | Gene symbol | CD44 | EXT2 | Gene ID | 960 | 2132 |
| Gene name | CD44 molecule (Indian blood group) | exostosin glycosyltransferase 2 | |
| Synonyms | CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 | SOTV|SSMS | |
| Cytomap | 11p13 | 11p11.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | CD44 antigenGP90 lymphocyte homing/adhesion receptorHermes antigencell surface glycoprotein CD44chondroitin sulfate proteoglycan 8epicanextracellular matrix receptor IIIhematopoietic cell E- and L-selectin ligandheparan sulfate proteoglycanhoming | exostosin-2N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferaseglucuronosyl-N-acetylglucosaminyl-proteoglycan/N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferasemultiple exostoses protein 2multiple exostosis 2putativ | |
| Modification date | 20180527 | 20180522 | |
| UniProtAcc | P16070 | Q93063 | |
| Ensembl transtripts involved in fusion gene | ENST00000263398, ENST00000526025, ENST00000449691, ENST00000360158, ENST00000415148, ENST00000437706, ENST00000433354, ENST00000428726, ENST00000526669, ENST00000433892, ENST00000278386, ENST00000434472, ENST00000352818, ENST00000528922, | ENST00000533608, ENST00000358681, ENST00000395673, ENST00000343631, ENST00000529186, | |
| Fusion gene scores | * DoF score | 11 X 10 X 7=770 | 5 X 5 X 3=75 |
| # samples | 14 | 5 | |
| ** MAII score | log2(14/770*10)=-2.4594316186373 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CD44 [Title/Abstract] AND EXT2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | CD44 | GO:0030214 | hyaluronan catabolic process | 17170110 |
| Hgene | CD44 | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | 17045821 |
| Hgene | CD44 | GO:0043518 | negative regulation of DNA damage response, signal transduction by p53 class mediator | 17045821 |
| Hgene | CD44 | GO:0044344 | cellular response to fibroblast growth factor stimulus | 19577615 |
| Hgene | CD44 | GO:0050731 | positive regulation of peptidyl-tyrosine phosphorylation | 17045821 |
| Hgene | CD44 | GO:0070374 | positive regulation of ERK1 and ERK2 cascade | 17045821 |
| Hgene | CD44 | GO:1902166 | negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | 17045821 |
| Tgene | EXT2 | GO:0006024 | glycosaminoglycan biosynthetic process | 12907669 |
| Tgene | EXT2 | GO:0033692 | cellular polysaccharide biosynthetic process | 12907669 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | SARC | TCGA-X6-A8C6-01A | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000263398 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000263398 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000263398 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000263398 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000263398 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000526025 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000526025 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000526025 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000526025 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000526025 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000449691 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000449691 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000449691 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000449691 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000449691 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000360158 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000360158 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000360158 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000360158 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000360158 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000415148 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000415148 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000415148 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000415148 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000415148 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000437706 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000437706 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000437706 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000437706 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000437706 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000433354 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000433354 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000433354 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000433354 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000433354 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000428726 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000428726 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000428726 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000428726 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000428726 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000526669 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000526669 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000526669 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000526669 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000526669 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000433892 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000433892 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000433892 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000433892 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000433892 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000278386 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000278386 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000278386 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000278386 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000278386 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000434472 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000434472 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000434472 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000434472 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000434472 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000352818 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000352818 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| In-frame | ENST00000352818 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| Frame-shift | ENST00000352818 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| 5CDS-intron | ENST00000352818 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| intron-3CDS | ENST00000528922 | ENST00000533608 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| intron-3CDS | ENST00000528922 | ENST00000358681 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| intron-3CDS | ENST00000528922 | ENST00000395673 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| intron-3CDS | ENST00000528922 | ENST00000343631 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
| intron-intron | ENST00000528922 | ENST00000529186 | CD44 | chr11 | 35160917 | + | EXT2 | chr11 | 44265699 | + |
Top |
FusionProtFeatures for CD44_EXT2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CD44 | EXT2 |
| Glycosyltransferase required for the biosynthesis ofheparan-sulfate. The EXT1/EXT2 complex possesses substantiallyhigher glycosyltransferase activity than EXT1 or EXT2 alone.Appears to be a tumor suppressor. Required for the exosomalrelease of SDCBP, CD63 and syndecan (PubMed:22660413).{ECO:0000269|PubMed:22660413}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for CD44_EXT2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_CD44_ENST00000263398_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000263398_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000526025_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000526025_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000449691_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000449691_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000360158_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000360158_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000415148_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000415148_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000437706_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000437706_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000433354_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000433354_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000428726_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000428726_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000526669_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000526669_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000433892_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000433892_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000278386_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000278386_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000434472_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000434472_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa >In-frame_CD44_ENST00000352818_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_68aa >In-frame_CD44_ENST00000352818_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_68aa |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_CD44_ENST00000263398_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000263398_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000526025_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000526025_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000449691_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000449691_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000360158_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000360158_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000415148_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000415148_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000437706_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000437706_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000433354_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000433354_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000428726_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000428726_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000526669_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000526669_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000433892_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000433892_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000278386_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000278386_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000434472_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000434472_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000352818_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA >In-frame_CD44_ENST00000352818_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_206nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_CD44_ENST00000263398_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_1284nt GAGAAGAAAGCCAGTGCGTCTCTGGGCGCAGGGGCCAGTGGGGCTCGGAGGCACAGGCACCCCGCGACACTCCAGGTTCCCCGACCCACG TCCCTGGCAGCCCCGATTATTTACAGCCTCAGCAGAGCACGGGGCGGGGGCAGAGGGGCCCGCCCGGGAGGGCTGCTACTTCTTAAAACC TCTGCGGGCTGCTTAGTCACAGCCCCCCTTGCTTGGGTGTGTCCTTCGCTCGCTCCCTCCCTCCGTCTTAGGTCACTGTTTTCAACCTCG AATAAAAACTGCAGCCAACTTCCGAGGCAGCCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCC TCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGT GGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGAC CATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGG CAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAG TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAAT ATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTT GTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGA CTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAA TGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT GGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGA >In-frame_CD44_ENST00000263398_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1782nt GAGAAGAAAGCCAGTGCGTCTCTGGGCGCAGGGGCCAGTGGGGCTCGGAGGCACAGGCACCCCGCGACACTCCAGGTTCCCCGACCCACG TCCCTGGCAGCCCCGATTATTTACAGCCTCAGCAGAGCACGGGGCGGGGGCAGAGGGGCCCGCCCGGGAGGGCTGCTACTTCTTAAAACC TCTGCGGGCTGCTTAGTCACAGCCCCCCTTGCTTGGGTGTGTCCTTCGCTCGCTCCCTCCCTCCGTCTTAGGTCACTGTTTTCAACCTCG AATAAAAACTGCAGCCAACTTCCGAGGCAGCCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCC TCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGT GGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGAC CATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGG CAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAG TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAAT ATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTT GTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGA CTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAA TGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT GGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGA TTAAAATTATTTTTTATTCCTTTTTCTACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTA ACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAG AAGGTCCCAAATCATAACCATTTTAAGAACAGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTT TTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGT GACCCCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG >In-frame_CD44_ENST00000526025_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_1272nt AGTGCGTCTCTGGGCGCAGGGGCCAGTGGGGCTCGGAGGCACAGGCACCCCGCGACACTCCAGGTTCCCCGACCCACGTCCCTGGCAGCC CCGATTATTTACAGCCTCAGCAGAGCACGGGGCGGGGGCAGAGGGGCCCGCCCGGGAGGGCTGCTACTTCTTAAAACCTCTGCGGGCTGC TTAGTCACAGCCCCCCTTGCTTGGGTGTGTCCTTCGCTCGCTCCCTCCCTCCGTCTTAGGTCACTGTTTTCAACCTCGAATAAAAACTGC AGCCAACTTCCGAGGCAGCCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCC TGCCCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCT GGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAA GGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAA CGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG GGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT CGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCC AGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAG AGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCA GGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCAC AGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTT >In-frame_CD44_ENST00000526025_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1770nt AGTGCGTCTCTGGGCGCAGGGGCCAGTGGGGCTCGGAGGCACAGGCACCCCGCGACACTCCAGGTTCCCCGACCCACGTCCCTGGCAGCC CCGATTATTTACAGCCTCAGCAGAGCACGGGGCGGGGGCAGAGGGGCCCGCCCGGGAGGGCTGCTACTTCTTAAAACCTCTGCGGGCTGC TTAGTCACAGCCCCCCTTGCTTGGGTGTGTCCTTCGCTCGCTCCCTCCCTCCGTCTTAGGTCACTGTTTTCAACCTCGAATAAAAACTGC AGCCAACTTCCGAGGCAGCCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCC TGCCCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCT GGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAA GGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAA CGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG GGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT CGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCC AGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAG AGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCA GGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCAC AGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTT TTTATTCCTTTTTCTACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTG GCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAAT CATAACCATTTTAAGAACAGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTG TCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCC AAGGGGATGCCAAAATTTCTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAAC >In-frame_CD44_ENST00000449691_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_984nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC >In-frame_CD44_ENST00000449691_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1482nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC TGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACT GTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCT GCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC AGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGG TCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTT CTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCT >In-frame_CD44_ENST00000360158_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_984nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC >In-frame_CD44_ENST00000360158_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1482nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC TGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACT GTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCT GCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC AGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGG TCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTT CTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCT >In-frame_CD44_ENST00000415148_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_984nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC >In-frame_CD44_ENST00000415148_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1482nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC TGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACT GTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCT GCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC AGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGG TCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTT CTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCT >In-frame_CD44_ENST00000437706_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_984nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC >In-frame_CD44_ENST00000437706_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1482nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC TGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACT GTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCT GCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC AGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGG TCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTT CTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCT >In-frame_CD44_ENST00000433354_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_984nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC >In-frame_CD44_ENST00000433354_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1482nt CCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGAT CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC CGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGC TGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT CTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTAC TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG TTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGA GGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCAT TTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAAT TCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGC TGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACT GTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCT GCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC AGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGG TCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTT CTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCT >In-frame_CD44_ENST00000428726_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_973nt AGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCC TTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTG GCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCC TGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAG GCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGG CATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTT CTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTG TTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG GGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAA GCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGAT >In-frame_CD44_ENST00000428726_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1471nt AGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCC TTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTG GCGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCC TGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAG GCTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGG CATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTT CTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTG TTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG GGAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAA GCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGAT CCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACTGTGTCTTAAAC ACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTG GGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAACAGATGACTCAG AAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGC CATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCTT TTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCTGGTATATTTAA >In-frame_CD44_ENST00000526669_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_972nt GCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCCT TTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGG CGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCT GTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGG CTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGC ATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTC TTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGT TTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGG GAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAG CCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATC >In-frame_CD44_ENST00000526669_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1470nt GCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCCT TTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGG CGCAGATCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCT GTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGG CTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGC ATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTC TTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGT TTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGG GAATCATGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAG CCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATC CTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACTGTGTCTTAAACA CCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGG GAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAACAGATGACTCAGA AACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCC ATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCTTT TGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCTGGTATATTTAAA >In-frame_CD44_ENST00000433892_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_966nt CCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCC CGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGA TCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAA AGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGA CAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCAC CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGA TCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAG TTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCA TGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAAC ATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCA >In-frame_CD44_ENST00000433892_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1464nt CCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCTCCGCCGGCCCCTGCCCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCC CGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGA TCGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAA AGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGA CAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCAC CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGA TCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAG TTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCA TGTAAAGGGTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAAC ATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCA GTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACTGTGTCTTAAACACCAATT CCTGATAGTCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACAC ACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAACAGATGACTCAGAAACCTC CAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAA GGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCTTTTGGTAT AAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCTGGTATATTTAAATCATTA >In-frame_CD44_ENST00000278386_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_868nt CCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAG AGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACT TTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGA GAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAA CCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGAT GGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGT AACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGG GTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGT GGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATG >In-frame_CD44_ENST00000278386_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1366nt CCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAG AGTGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACT TTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGA GAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAA CCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGAT GGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGT AACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGG GTACCCAGACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGT GGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATG AGCTATTCCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACTGTGTCTTAAACACCAATTCCTGATAG TCCAAGGAACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGG AGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAACAGATGACTCAGAAACCTCCAGAGGAA TCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGC TCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCTTTTGGTATAAACTTAA CATTAGCCAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCTGGTATATTTAAATCATTAAATTTCAG >In-frame_CD44_ENST00000434472_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_861nt CTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCAT CAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGA GAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACA AGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTT TCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCT TCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATC TGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCA GACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTT GATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATT >In-frame_CD44_ENST00000434472_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1359nt CTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCAT CAACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGA GAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACA AGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTT TCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCT TCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATC TGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCA GACCTCACTTTTAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTT GATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATT CCTCTTTGGTTTGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGG AACCACCTTTCTCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATG TCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAACAGATGACTCAGAAACCTCCAGAGGAATCTGTTT GCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAGCT GGTACCCGTAAAAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCTTTTGGTATAAACTTAACATTAGC CAGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTGCTGGTATATTTAAATCATTAAATTTCAGCATTTAC >In-frame_CD44_ENST00000352818_chr11_35160917_+_EXT2_ENST00000358681_chr11_44265699_+_850nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA GCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAG CACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACA AGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATG CCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAAC TTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTT TAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCT TGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTT >In-frame_CD44_ENST00000352818_chr11_35160917_+_EXT2_ENST00000395673_chr11_44265699_+_1348nt ATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGGTCAGAGTGCATCAACAAGTTTG CTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGA GCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTGAGGCTGGGACAGAGGGAGAGAACAAGGCCTCCCAG CACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACA AGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATG CCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAAC TTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTT TAGTTATTTACATCAATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCT TGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTT TGGCTTTTTGATATGATTAAAATTATTTTTTATTCCTTTTTCTACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTC TCCCTTGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCT CTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAACAGATGACTCAGAAACCTCCAGAGGAATCTGTTTGCTTCCTGATT AGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAA AAGTTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTC |
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FusionGenePPI for CD44_EXT2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| CD44 | ARHGEF1, COL14A1, LCK, IGFBP3, MMP7, ERBB4, TIAM1, TGFBR1, VAV2, FN1, EGFR, ERBB2, HBEGF, EZR, VCAN, SRC, PTPRC, FYN, MSN, NF2, ELAVL1, PRKCZ, ITGB1, FLOT2, CAV1, EP300, STAT3, SLC3A2, IQGAP1, FMNL1, ATF2, ANK1, VHL, BAG1, DPP8, ABCE1, AIM1, DBN1, FLNA, MYH9, DYNLL1, SYNPO, LIMA1, MYO19, SQSTM1, CHERP, PHRF1, CDC73, CD44, FGFR1, CTDSPL, GMEB2, FGF2, GMEB1, DHRS2, METTL8, FAM115C, SLC39A9, AMPD2, SNX33, CAMKV, ATG9A, PRDM10, C17orf80, SNX18, FGFR2, FGFRL1, VANGL1, PARP2, TEFM, LAMA3, MTCH2, HADHB, CLCN7, XAB2, GTF3C2, CDC40, GTF3C3, AQR, GTF3C1, GTF3C6, HADHA, TMEM160, OSBPL8, CDC5L, TNPO2, PRKCI, LEMD3, LGALS1, RBM22, VANGL2, MBOAT7, ISY1, GBAS, TRIM25, CD74 | EXT2 | STK16, SNCG, HYOU1, CNTF, TCEB1, RPS29, CRB1, CLEC2L, FABP4, HNF4A, EXT1, EXT2, GALNT5, TRAP1, TK1, CDKN1A, SMN1, ANXA7, PFDN1, GSKIP, SLC22A2, IDS, INVS, TTC19, RBFA, AFAP1, ATE1, CUX1, USP30, NOP9, HLA-DPB1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CD44_EXT2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
| Hgene | CD44 | P16070 | DB08818 | Hyaluronic acid | CD44 antigen | small molecule | approved|vet_approved |
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RelatedDiseases for CD44_EXT2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | CD44 | C0023487 | Acute Promyelocytic Leukemia | 2 | CTD_human |
| Hgene | CD44 | C0011616 | Contact Dermatitis | 1 | CTD_human |
| Hgene | CD44 | C0017661 | IGA Glomerulonephritis | 1 | CTD_human |
| Hgene | CD44 | C0023467 | Leukemia, Myelocytic, Acute | 1 | CTD_human |
| Hgene | CD44 | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
| Hgene | CD44 | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
| Hgene | CD44 | C0027746 | Nerve Degeneration | 1 | CTD_human |
| Hgene | CD44 | C0030297 | Pancreatic Neoplasm | 1 | CTD_human |
| Hgene | CD44 | C0037274 | Dermatologic disorders | 1 | CTD_human |
| Hgene | CD44 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
| Hgene | CD44 | C0042900 | Vitiligo | 1 | CTD_human |
| Hgene | CD44 | C0311375 | Arsenic Poisoning | 1 | CTD_human |
| Hgene | CD44 | C2609414 | Acute kidney injury | 1 | CTD_human |
| Tgene | EXT2 | C1851413 | EXOSTOSES, MULTIPLE, TYPE II | 9 | CTD_human;UNIPROT |
| Tgene | EXT2 | C0015306 | Hereditary Multiple Exostoses | 1 | CTD_human;HPO;ORPHANET |
| Tgene | EXT2 | C4225248 | SEIZURES, SCOLIOSIS, AND MACROCEPHALY SYNDROME | 1 | ORPHANET;UNIPROT |
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